New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2041152 =NA (NA)5 (0.060) 6/162 NT NA noncoding (1/34 nt) REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2041182 = NA (NA)noncoding (31/34 nt) REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences REP142 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 123 total aligned reads displayed.

TTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTGAG  >  NC_000913/2041083‑2041278
                                                                                                   |                                                                                                
ttACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATAGGGCGCTCGCGCCACATCCGGCa                                                                                                  <  1:1394488/100‑1 (MQ=25)
tccgatctgCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCa                                                                                                  <  1:649459/92‑1 (MQ=255)
ataaaataaattattttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatgccggatgtggcgcgagcgccctatccggca                                                                                                  <  2:731101‑M2/1‑1 (MQ=255)
 tACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCAt                                                                                                 <  1:857429/100‑1 (MQ=255)
 tACGCAAGCAGGTTCACAACAAATTATATGTATAACTTCATATTGCCGACAAAGTACGCGTTATCACTGCCGGATGTAGAGCGAGCGCCCTATCCGGCAt                                                                                                 >  2:2684273/1‑100 (MQ=255)
 aacgcaaGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCAt                                                                                                 <  2:482826‑M2/93‑1 (MQ=255)
  aaaataaattatgttggtgatttgaggttgatgacaaacgaaacataacctgatgcgatctgtgtatGCCGGATGTGGCGCGAGCGCCCTATCCGGCATa                                                                                                >  1:26006‑M1/68‑100 (MQ=255)
  aCGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATAGGGCGCTCGCGCCACATCCGGCagg                                                                                                <  1:1393366/100‑3 (MQ=25)
   cgcaaGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATac                                                                                               >  2:88771‑M2/6‑100 (MQ=255)
   cgcaaGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATac                                                                                               >  1:893102‑M2/6‑100 (MQ=255)
   cgcaaGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATac                                                                                               >  2:1360781‑M2/6‑100 (MQ=255)
   cgcaaGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATACCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATa                                                                                                >  2:1655164‑M2/6‑99 (MQ=255)
     caaGCAGGTTCACAACTAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATacac                                                                                             <  2:1606953‑M2/97‑1 (MQ=255)
        gCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCaagatcgga                                                                                          >  2:649457/1‑92 (MQ=255)
         cAGGCTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGAt                                                                                         <  1:2546704/100‑1 (MQ=255)
          aGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATc                                                                                        <  2:2486991/100‑1 (MQ=255)
               cacaACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATc                                                                                   >  2:1550946/1‑100 (MQ=255)
                acaacaAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCa                                                                                  <  1:114593/100‑1 (MQ=255)
                 caacaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAg                                                                                 >  1:1333835/1‑100 (MQ=255)
                 caacaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCACTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAg                                                                                 >  2:2267900/1‑100 (MQ=255)
                   acaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGt                                                                               >  2:2666078/1‑100 (MQ=255)
                   acaaATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGt                                                                               <  2:646843/100‑1 (MQ=255)
                     naaTTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTa                                                                             >  2:378418/2‑100 (MQ=255)
                       aTTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATg                                                                           <  2:694389/100‑1 (MQ=255)
                        ttATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGGGCGCCCTATCAGGCATACACAGATCGCATCAGGTTATg                                                                           >  1:1018245/1‑99 (MQ=255)
                        ttATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAgg                                                                                >  2:2330846/1‑94 (MQ=255)
                             tGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGAGCGCATCAGGTTATGTTTCGt                                                                     >  2:1908083/1‑100 (MQ=255)
                             tGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCAGGCATACACAGATCGCATCAGGTTATGTTTCGt                                                                     >  2:2046770/1‑100 (MQ=255)
                              gTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGtt                                                                    >  1:2664151/1‑100 (MQ=255)
                               tataACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGttt                                                                   >  1:2289361/1‑100 (MQ=255)
                                ataACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTg                                                                  <  2:814606/100‑1 (MQ=255)
                                 taACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGt                                                                 <  1:1671527/100‑1 (MQ=255)
                                  aaCTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtc                                                                <  2:2522034/100‑1 (MQ=255)
                                   aCTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtca                                                               <  1:1651501/100‑1 (MQ=255)
                                   aCTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtca                                                               >  2:632452/1‑100 (MQ=255)
                                    cTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcat                                                              >  1:158211/1‑100 (MQ=255)
                                     ttCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcatc                                                             <  1:1620143/100‑1 (MQ=255)
                                      tCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGtcatca                                                            <  2:1355241/100‑1 (MQ=255)
                                       cATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGCTTCGTTTGTCATCaa                                                           >  1:2708438/1‑100 (MQ=255)
                                         tatTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAAcc                                                         >  2:969073/1‑100 (MQ=255)
                                          atTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCt                                                        >  1:1825969/1‑100 (MQ=255)
                                             gCCGACAAAGTACGCGTTATCCCTGACGGATGTGGCGCGAGCGACCTATACGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCaa                                                     >  2:2194074/1‑100 (MQ=255)
                                              ccGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCaaa                                                    <  1:1502371/100‑1 (MQ=255)
                                              ccGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTAATCAACCTCaaa                                                    >  2:303345/1‑100 (MQ=255)
                                               cGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAAt                                                   >  2:1904937/1‑100 (MQ=255)
                                               cGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAAt                                                   >  1:1546656/1‑100 (MQ=255)
                                                gACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATc                                                  >  2:1030582/1‑100 (MQ=255)
                                                gACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATc                                                  <  2:1810278/100‑1 (MQ=255)
                                                 aCAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCTTCCACCTCAAATc                                                  >  1:1562458/1‑99 (MQ=255)
                                                 aCAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATcn                                                 <  2:103210/100‑2 (MQ=255)
                                                   aaaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCAcc                                               <  1:2705235/100‑1 (MQ=255)
                                                   aaaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCAcc                                               <  2:727211/100‑1 (MQ=255)
                                                    aaGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCa                                              <  1:446510/100‑1 (MQ=255)
                                                           cgTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAaataat                                       >  1:1293115/1‑100 (MQ=255)
                                                               aTCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAatttat                                   >  2:2160492/1‑100 (MQ=255)
                                                                tgtatgccggatagggcgctcgcgccacatccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAatttatt                                  >  1:1757653‑M2/36‑100 (MQ=255)
                                                                tCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAatttatt                                  >  2:1682315/1‑100 (MQ=255)
                                                                  tatgccggatagggcgctcgcgccacatccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAACATAAtttatttt                                >  1:26006‑M2/34‑100 (MQ=255)
                                                                   cTGCCGGATGTGGCGTGAGCGCCCTTTCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAAtttatttta                               <  2:438031/100‑1 (MQ=255)
                                                                   cTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAAtttatttt                                >  2:2609150/1‑99 (MQ=255)
                                                                    tGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAAtttattttat                              >  2:1828246‑M1/2‑100 (MQ=255)
                                                                     gccggatagggcgctcgcgccacatccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATttattttatt                             >  1:761813‑M2/31‑100 (MQ=255)
                                                                     accGGACGTGCCGCGAGCCCCCTCTCCGGCATACACAGAGCGCATTTGGTTACGTTTCGTTGGTCATCAGCCTCAAATCACCACAATAAtttattttat                              >  2:757255/2‑99 (MQ=255)
                                                                     GCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATttattttatt                             >  1:1761151‑M1/1‑100 (MQ=255)
                                                                     GCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATttattttatt                             >  1:969077‑M1/1‑100 (MQ=255)
                                                                     GCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATttattttatt                             >  1:169925‑M1/1‑100 (MQ=255)
                                                                     GCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATttattttatt                             <  1:565816‑M1/100‑1 (MQ=255)
                                                                       CGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATttattttatttn                           >  1:378418‑M1/1‑99 (MQ=255)
                                                                       CGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTc                           >  2:1949381‑M1/1‑100 (MQ=255)
                                                                       CGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTc                           >  1:2290517‑M1/1‑100 (MQ=255)
                                                                       CGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTc                           >  1:2043272‑M1/1‑100 (MQ=255)
                                                                         gatagggcgctcgcgccacatccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCaa                         >  1:845473‑M2/27‑100 (MQ=255)
                                                                         GATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCaa                         >  1:1958289‑M1/1‑100 (MQ=255)
                                                                          ATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAAt                        >  2:1841168‑M1/1‑100 (MQ=255)
                                                                           tgtgGCGCGTGCGTCTTATCCGGCATACACATATCGCATCAGATTATGTTTCTTTTGTCATCAACCTCAAATCTCCGAAGTCATTTATTTTATTTCAAt                        <  2:75864/99‑1 (MQ=255)
                                                                           TGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATa                       >  1:1071131‑M1/1‑100 (MQ=255)
                                                                           TGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATa                       <  1:1240288‑M1/100‑1 (MQ=255)
                                                                            gtgGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATaa                      >  1:111317/1‑100 (MQ=255)
                                                                             tgGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAag                     >  1:2672786/1‑100 (MQ=255)
                                                                             tgGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAag                     >  2:2054755/1‑100 (MQ=255)
                                                                              ggcgctcgcgcCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAaga                    >  1:2435995/8‑100 (MQ=255)
                                                                              ggCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATaa                      >  2:416412/1‑98 (MQ=255)
                                                                                 gcgAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAagatag                 <  2:280938/100‑1 (MQ=255)
                                                                                   gAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAagatagat               >  1:717235/1‑100 (MQ=255)
                                                                                     gcgcCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATaa             >  1:1724584/1‑100 (MQ=255)
                                                                                      cgcCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAg            <  2:1880991/100‑1 (MQ=255)
                                                                                      cgcCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAg            >  2:1178876/1‑100 (MQ=255)
                                                                                        cccTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTa          <  2:1820207/100‑1 (MQ=255)
                                                                                         ccTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAg         >  1:2218647/1‑100 (MQ=255)
                                                                                          cTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGa        <  2:1825962/100‑1 (MQ=255)
                                                                                            atccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAAc      <  2:427109‑M2/93‑1 (MQ=255)
                                                                                            atccggcATACACAGATCGCATCAGGTTATGTTTCGATTGTAATCAAACCCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAAATAAgtata        >  2:859369‑M2/8‑96 (MQ=255)
                                                                                              ccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTg    >  2:1332676‑M2/6‑100 (MQ=255)
                                                                                              ccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTg    >  1:2135228‑M2/6‑100 (MQ=255)
                                                                                              ccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTg    >  2:89293‑M2/6‑100 (MQ=255)
                                                                                              ccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTg    >  2:2568356‑M2/6‑100 (MQ=255)
                                                                                              ccggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTAATCAACCTCAAATAACCAAAATAATTTATTTTATTTAAATAAGATAGATAAGTagaatt     >  2:1322685‑M2/6‑97 (MQ=255)
                                                                                               cggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTga   <  2:2672768‑M2/96‑1 (MQ=255)
                                                                                               cggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATGTATTTTATTTCAATAAGATAGATAAGTAGAAATga   >  2:344085‑M2/5‑100 (MQ=255)
                                                                                                ggcATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTgag  <  2:1399134‑M2/97‑1 (MQ=255)
                                                                                                   |                                                                                                
TTACGCAAGCAGGTTCACAACAAATTATCTGTATAACTTCATATTGCCGACAAAGTACGCGTTATCCCTGCCGGATGTGGCGCGAGCGCCCTATCCGGCATACACAGATCGCATCAGGTTATGTTTCGTTTGTCATCAACCTCAAATCACCAAAATAATTTATTTTATTTCAATAAGATAGATAAGTAGAACTGAG  >  NC_000913/2041083‑2041278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.