| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3884855 | 110 (0.810) | 23 (0.180) | 9/166 | NT | 17.9% | coding (40/258 nt) | yidD | membrane protein insertion efficiency factor, UPF0161 family inner membrane protein |
| ? | NC_000913 | = 3884868 | 109 (0.860) | coding (53/258 nt) | yidD | membrane protein insertion efficiency factor, UPF0161 family inner membrane protein | |||||
GTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3884751‑3884855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatagACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGCAA < NC_000913/3884868‑3884770 GTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCT < 1:1517043/100‑1GTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCT < 1:1221965/100‑1GTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCT > 1:3516092/1‑100 cgatctCGAATAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTG < 1:2496799/94‑1 TGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTG < 2:620872/100‑1 GTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGAT < 2:2822945/100‑1 GTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCCTGCTCTCTCGGAACCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGAT < 2:8298/100‑1 TGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATA < 1:2564821/100‑1 TGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGAT > 1:3215085/1‑99 GGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAG > 1:2170488/1‑100 gaaAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATA < 1:2194480/95‑1 CGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGAgatcg > 2:2496811/1‑95 GCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTA < 2:1506050/100‑1 CGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCCGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATC < 1:2039567/100‑1 ACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAG < 2:3388221/100‑1 ACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAG < 2:352528/100‑1 ACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAG < 2:1140069/100‑1 CCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCTACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGG < 2:219891/100‑1 CCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGG < 2:1854575/100‑1 CCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGG > 1:3555198/1‑100 CTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGA < 2:159377/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAGAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 1:875158/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 2:3563677/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 1:358272/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 1:727272/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 1:967872/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 1:2697068/100‑1 TCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGAC < 2:487481/100‑1 CGATAGCCGGTCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGTTCTTGATAGACCCGAATGAGGGCTATCAGGGCC < 1:2509222/100‑1 CGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGACC < 1:2200972/100‑1 CGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGACC < 2:3682822/100‑1 CGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGACC < 1:2124941/100‑1 CGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGACCCGAATGAGGGCTATCAGGACC < 1:3062802/100‑1 ATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCCGGTCCTGATAGACCCGAATGAGGGCTATCAGGACCCG < 1:2041330/100‑1 TAACCATACTCTCTCGGAATCGTTGTAACAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCCGATAGACCCGAATGAGGGCTATCAGG < 1:2181086/94‑1 TGATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTC < 1:280226/100‑1 TGATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTC > 2:3306383/1‑100 TGATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAAGTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTC < 1:3202/100‑1 GATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTC > 1:987184/1‑99 ATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGG < 2:1790983/100‑1 ATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGG > 2:357343/1‑100 ATAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGG < 1:638962/100‑1 TAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGC < 2:3311093/100‑1 TAGACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGC > 1:252305/1‑100 GACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGCAA > 2:2819734/1‑100 GACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGC < 1:271100/98‑1 GACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTCTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGCAA > 1:1535726/1‑100 GTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3884751‑3884855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatagACCCGAATGAGGGCTATCAGGACCCGCGAGCCAGGCGACAGTGGCGGCGCCATAATTTTTCCAACGCTTCCGAGAGAGCACGGTTATCGAGGTCGGCAA < NC_000913/3884868‑3884770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |