New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1187036 =	NA (NA)	9 (0.070)	6/168	NT	NA	coding (1193/1227 nt)	pepT	peptidase T
	?	NC_000913	1187066 =	NA (NA)					coding (1223/1227 nt)	pepT	peptidase T

TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1187139‑1187036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGA  >  NC_000913/1187066‑1187162                                                                                                                                                                                                           TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATA                                                                                                       <  1:2844983/100‑1  ATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATAC                                                                                                      >  1:507945/1‑100   TTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACG                                                                                                     <  2:429674/100‑1    TGGTTCTTCGAAGGGTGAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGTCGTTAACTCGGCAATACGG                                                                                                    <  2:484575/100‑1    TGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGG                                                                                                    <  2:2960851/100‑1     GGTTCTTCGAAGGGTAAGTTTGGATTTAATCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  2:1209900/1‑100     GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCTTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  1:2680802/1‑100     GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  2:797973/1‑100     GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  1:1006698/1‑100     GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  2:3774490/1‑100     GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  2:119220/1‑100     GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA                                                                                                   >  1:2421767/1‑100                                                                  TCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTT                                      >  2:590303/1‑100                                                                    GCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGCTGCCGCATCCGGCTTAAATCCAAACTTACCCTTCG                                    >  2:1605025/1‑100                                                                    GCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGCTGCCGCATCCGGCTTAAATCCAAACTTACCCTTCG                                    >  1:1196028/1‑100                                                                     CTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAACGGGATGCGCCATGTGATGCCGCATCCGGCTTAACTCCAAACTTACCCTTCGA                                   >  1:3793634/1‑100                                                                     CTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGA                                   >  2:2049315/1‑100                                                                        ACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGA                                >  2:678166/1‑100                                                                         CTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAA                               >  1:1357158/1‑100                                                                           TCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC                             >  1:988160/1‑100                                                                           TCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC                             >  2:2975740/1‑100                                                                                                     CGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCGGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCAGCTATTGACGAGCGCC      >  1:567675/1‑97                                                                                                     CGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCG   <  2:2132392/100‑1                                                                                                      GGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGA  >  1:1865761/1‑100                                                                                                                                                                                                           TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1187139‑1187036 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGA  >  NC_000913/1187066‑1187162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.