New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1187036 =NA (NA)9 (0.070) 6/168 NT NA coding (1193/1227 nt) pepT peptidase T
?NC_000913 1187066 = NA (NA)coding (1223/1227 nt) pepT peptidase T

Only 100 of 188 total aligned reads displayed.

GATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC  >  NC_000913/1186937‑1187135
                                                                                                   |                                                                                                   
gATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGt                                                                                                     >  1:658407/1‑100 (MQ=255)
 aTTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTc                                                                                                    <  1:636308/100‑1 (MQ=255)
  ttACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAAGAAAAGAAAAAGCGGTGCAGGTGATCGTcc                                                                                                   <  1:3153073/100‑1 (MQ=255)
  tcgcggcgctggtcaatagcgggtattggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTcc                                                                                                   >  1:1865761‑M1/98‑100 (MQ=255)
     ccGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGt                                                                                                 >  2:152772/1‑99 (MQ=255)
     ccGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTa                                                                                                >  1:467374/1‑100 (MQ=255)
     ccGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTa                                                                                                >  2:2686478/1‑100 (MQ=255)
      ggcgctcgtcaatagctggtattggttcttcgaagggtaagtttggatttaagcccgatgcggcatcacatgccgcatcccttttcgcttactTCCg                                                                                                  >  1:567675‑M1/94‑97 (MQ=255)
       gggCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTAtt                                                                                              >  2:2583062/3‑100 (MQ=255)
        tGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTg                                                                                             >  2:3562647/1‑100 (MQ=255)
         gCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGc                                                                                            <  2:783466/100‑1 (MQ=255)
         gCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGc                                                                                            <  2:1339147/100‑1 (MQ=255)
         gCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGc                                                                                            <  1:403876/100‑1 (MQ=255)
          cccGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCCTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGcc                                                                                           >  1:2497004/1‑100 (MQ=255)
          cccGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGcc                                                                                           >  1:1389678/1‑100 (MQ=255)
          cccGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGCGATCGTCCGTATTGcc                                                                                           >  2:1841134/1‑100 (MQ=255)
           ccGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCg                                                                                          <  2:2097874/100‑1 (MQ=255)
             gAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAACAAGCGGTGCAGGTGATCGTCCGTATTGCCGAg                                                                                        <  2:3621124/100‑1 (MQ=255)
               aCCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGtt                                                                                      <  2:2049892/100‑1 (MQ=255)
                   gTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACg                                                                                  <  1:773760/100‑1 (MQ=255)
                     tCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgc                                                                                <  1:1915273/100‑1 (MQ=255)
                     tCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAACGGTGCAGGTGATCGTCCGTATTGCCGAGTGAACGgc                                                                                >  1:1072840/1‑100 (MQ=255)
                      cACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgcg                                                                               >  1:2018712/1‑100 (MQ=255)
                       aCTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGAAGGTGATCGTCCGTATTGCCGAGTTAACGgcg                                                                               >  1:1517728/1‑99 (MQ=255)
                          ggCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAAc                                                                           >  1:929238/1‑100 (MQ=255)
                          ggCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAAc                                                                           <  1:1184979/100‑1 (MQ=255)
                             ggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGa                                                                        >  1:988160‑M1/71‑100 (MQ=255)
                             ggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGa                                                                        >  2:2975740‑M1/71‑100 (MQ=255)
                             ggTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGa                                                                        >  1:3252765/1‑100 (MQ=255)
                              gTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGaa                                                                       >  1:1492901/1‑100 (MQ=255)
                                tcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGt                                                                     >  2:678166‑M1/68‑100 (MQ=255)
                                  cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                   >  2:2464954/1‑100 (MQ=255)
                                  cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                   >  1:519990/1‑100 (MQ=255)
                                  cAACTATCATGGTAAGCATGAGTTTGTGACTATGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                   >  1:1647730/1‑100 (MQ=255)
                                   tcgaagggtaagtttggagttaagccggatgcggcatcacatggcgcatcccgtttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAg                                                                  >  1:3793634‑M1/65‑100 (MQ=255)
                                    aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                 <  2:2251832/100‑1 (MQ=255)
                                     cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                >  1:1209893/1‑100 (MQ=255)
                                     cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                >  1:797965/1‑100 (MQ=255)
                                     cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                >  1:1837407/1‑100 (MQ=255)
                                     cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                <  2:580307/100‑1 (MQ=255)
                                       aTCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaa                                                              >  2:3386298/1‑100 (MQ=255)
                                       aTCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                               >  2:3769771/1‑99 (MQ=255)
                                        tCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaa                                                             >  1:580059/1‑100 (MQ=255)
                                           tGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                          <  1:3402418/100‑1 (MQ=255)
                                            ggTAAGCATGAGTTTGTAACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                          <  2:2934432/99‑1 (MQ=255)
                                             gTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGa                                                        >  2:1444830/1‑100 (MQ=255)
                                                 gCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCg                                                    >  1:1364797/1‑100 (MQ=255)
                                                   aTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGc                                                  <  2:508214/100‑1 (MQ=255)
                                                   aTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGc                                                  <  2:3036155/100‑1 (MQ=255)
                                                   aTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGACTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCgg                                                   >  1:2757686/1‑99 (MQ=255)
                                                    tGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCa                                                 <  2:467380/100‑1 (MQ=255)
                                                       gTTTGTGACTCTGGTAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                              <  1:2600427/100‑1 (MQ=255)
                                                       gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                              <  2:1974997/100‑1 (MQ=255)
                                                       gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTACGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                              <  2:305353/100‑1 (MQ=255)
                                                        cgatctaCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgtg                                             <  2:1717660/94‑1 (MQ=255)
                                                         ttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGa                                            <  2:2843621/100‑1 (MQ=255)
                                                         ttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGa                                            >  2:3163339/1‑100 (MQ=255)
                                                            tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                         <  2:1389686/100‑1 (MQ=255)
                                                             ggctctGGAAGGTATGGAAAAAGCGGTGCATGTGATAGTCCGTGTTGTCGAGTTAACGGGGCAACGGAAGTAAGCGAAAAGGGATGCGACATGGGATGc                                         <  1:1441097/97‑1 (MQ=255)
                                                             gACTCTAGAAAGAAAGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                        <  1:1331955/100‑1 (MQ=255)
                                                              aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGagatcg                                       >  1:1717651/1‑95 (MQ=255)
                                                              aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                       >  2:3095270/1‑100 (MQ=255)
                                                              aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                       <  2:1025154/100‑1 (MQ=255)
                                                               ctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGc                                      <  2:3443479/100‑1 (MQ=255)
                                                                  tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                   <  2:237703/100‑1 (MQ=255)
                                                                   ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                  >  1:3018667/1‑100 (MQ=255)
                                                                   ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc                                  <  2:1274956/100‑1 (MQ=255)
                                                                   ggAAGGGATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGAAAAGAAAAAAAAAAAAAAGGGATGCGGCATCACATGCCGCATc                                   <  1:2299026/99‑1 (MQ=255)
                                                                     aaGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCgg                                >  2:1163172/1‑100 (MQ=255)
                                                                        gTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                             >  2:275416/1‑100 (MQ=255)
                                                                        aaaaagAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAATGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                             <  1:2121043/95‑1 (MQ=255)
                                                                         naTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                             >  2:848522/2‑99 (MQ=255)
                                                                          aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                           >  2:1886115/1‑100 (MQ=255)
                                                                           tGGAAAAAGAGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGTGCAAAAGAAAAAAAAGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaaa                          <  1:600792/100‑1 (MQ=255)
                                                                             gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                        <  2:428491/100‑1 (MQ=255)
                                                                              aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGcagatcgga                       >  1:900292/1‑92 (MQ=255)
                                                                              aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                       <  2:1277704/100‑1 (MQ=255)
                                                                              aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                       >  2:3709295/1‑100 (MQ=255)
                                                                                 aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaaa                    >  2:3567754/1‑100 (MQ=255)
                                                                                 aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaaa                    >  1:343256/1‑100 (MQ=255)
                                                                                 aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaa                     <  2:3248447/99‑1 (MQ=255)
                                                                                  aGCGGTGCAGGTGATCGTCCGTATTGCCGAGGTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAAc                   <  1:806081/100‑1 (MQ=255)
                                                                                   gCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACt                  >  2:596778/1‑100 (MQ=255)
                                                                                    cGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCGTAAATCCAAACtt                 >  2:3151971/1‑100 (MQ=255)
                                                                                     ggTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTa                <  2:3721655/100‑1 (MQ=255)
                                                                                      gTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAc               >  1:2143591/1‑100 (MQ=255)
                                                                                      gTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAc               >  2:1733039/1‑100 (MQ=255)
                                                                                       tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc              >  2:2513435/1‑100 (MQ=255)
                                                                                         cAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCt            >  2:954491/1‑100 (MQ=255)
                                                                                          aGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCtt           >  1:2398800/1‑100 (MQ=255)
                                                                                           ggggATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc          <  2:1784998/97‑1 (MQ=255)
                                                                                           ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc          <  2:1082770/100‑1 (MQ=255)
                                                                                           ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc          >  2:1363585/1‑100 (MQ=255)
                                                                                              gATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaa       <  2:64793/100‑1 (MQ=255)
                                                                                              gATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaa       <  1:1280356/100‑1 (MQ=255)
                                                                                               aTCGTCCGTATTGCGGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaag      <  1:778298/100‑1 (MQ=255)
                                                                                                   TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc  >  1:2421767‑M1/1‑100 (MQ=255)
                                                                                                   TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc  >  2:3774490‑M1/1‑100 (MQ=255)
                                                                                                   TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc  >  2:119220‑M1/1‑100 (MQ=255)
                                                                                                   TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc  >  1:1006698‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC  >  NC_000913/1186937‑1187135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.