New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1187036 =NA (NA)9 (0.070) 6/168 NT NA coding (1193/1227 nt) pepT peptidase T
?NC_000913 1187066 = NA (NA)coding (1223/1227 nt) pepT peptidase T

Only 100 of 193 total aligned reads displayed.

GTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCA  >  NC_000913/1186967‑1187165
                                                                                                   |                                                                                                   
gTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGaa                                                                                                     <  2:1058968/100‑1 (MQ=255)
  tcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGt                                                                                                   >  2:678166‑M1/68‑100 (MQ=255)
    cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                                                 >  1:519990/1‑100 (MQ=255)
    cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                                                 >  2:293337/1‑100 (MQ=255)
     tcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAg                                                                                                >  2:2049315‑M1/65‑100 (MQ=255)
     tcgaagggtaagtttggagttaagccggatgcggcatcacatggcgcatcccgtttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAg                                                                                                >  1:3793634‑M1/65‑100 (MQ=255)
     aaCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAg                                                                                                <  2:3397940/100‑1 (MQ=255)
      cgaagggtaagtttggatttaagccggatgcggcagcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                               >  1:1196028‑M1/64‑100 (MQ=255)
      aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                               <  2:1007282/100‑1 (MQ=255)
      aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                               <  2:2251832/100‑1 (MQ=255)
       cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                              >  1:1209893/1‑100 (MQ=255)
       cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                              <  2:580307/100‑1 (MQ=255)
        tATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                                                             >  1:1826278/1‑100 (MQ=255)
         aTCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                                                             >  2:3769771/1‑99 (MQ=255)
          tCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaa                                                                                           >  1:580059/1‑100 (MQ=255)
            aTGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAg                                                                                         >  2:3782993/1‑100 (MQ=255)
               gTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGa                                                                                      >  2:1444830/1‑100 (MQ=255)
                     aTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGc                                                                                <  2:3036155/100‑1 (MQ=255)
                     aTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGACTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCgg                                                                                 >  1:2757686/1‑99 (MQ=255)
                       gAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAt                                                                              <  2:1940933/100‑1 (MQ=255)
                         gtgtggggctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                                                            <  1:1383096/92‑1 (MQ=255)
                         gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                                                            <  1:3386278/100‑1 (MQ=255)
                         gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTACGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                                                            <  2:305353/100‑1 (MQ=255)
                          cgatctaCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgtg                                                                           <  2:1717660/94‑1 (MQ=255)
                           ttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtcaca                                                                          <  2:1826287/100‑5 (MQ=255)
                           ttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGa                                                                          >  2:3163339/1‑100 (MQ=255)
                              tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                                                       <  2:658415/100‑1 (MQ=255)
                               ggctctGGAAGGTATGGAAAAAGCGGTGCATGTGATAGTCCGTGTTGTCGAGTTAACGGGGCAACGGAAGTAAGCGAAAAGGGATGCGACATGGGATGc                                                                       <  1:1441097/97‑1 (MQ=255)
                               gACTCTAGAAAGAAAGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                                                      <  1:1331955/100‑1 (MQ=255)
                                aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                                                     >  2:3095270/1‑100 (MQ=255)
                                 ctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGc                                                                    >  1:394683/1‑100 (MQ=255)
                                  tctGGAAAGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCa                                                                   <  2:3614923/100‑1 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc                                                                 >  2:1357243/1‑100 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                 <  2:237703/100‑1 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                                                >  1:3018667/1‑100 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc                                                                <  1:773930/100‑1 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCAGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCAAAAAGGGGTGCGGCAAGTGATGACGCATcc                                                                >  2:1377738/1‑100 (MQ=255)
                                     ggAAGGGATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGAAAAGAAAAAAAAAAAAAAGGGATGCGGCATCACATGCCGCATc                                                                 <  1:2299026/99‑1 (MQ=255)
                                       aaGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCgg                                                              >  2:1163172/1‑100 (MQ=255)
                                        aGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGc                                                             <  2:3513339/100‑1 (MQ=255)
                                          gTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                                                           >  2:275416/1‑100 (MQ=255)
                                           tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                                                          <  2:45840/100‑1 (MQ=255)
                                           tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                                                          >  1:916820/1‑100 (MQ=255)
                                           naTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                                                           >  2:848522/2‑99 (MQ=255)
                                            aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                                                         >  2:1886115/1‑100 (MQ=255)
                                             tGGAAAAAGAGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGTGCAAAAGAAAAAAAAGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaaa                                                        <  1:600792/100‑1 (MQ=255)
                                              ggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAt                                                       >  1:343076/1‑100 (MQ=255)
                                              ggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAt                                                       >  2:620364/1‑100 (MQ=255)
                                               gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                                                      >  1:1547951/1‑100 (MQ=255)
                                               gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                                                      >  1:788798/1‑100 (MQ=255)
                                                aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGcagatcgga                                                     >  1:900292/1‑92 (MQ=255)
                                                aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                                                     <  2:1277704/100‑1 (MQ=255)
                                                aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                                                     >  2:3709295/1‑100 (MQ=255)
                                                aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                                                     >  1:2172692/1‑100 (MQ=255)
                                                   aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaaa                                                  >  1:343256/1‑100 (MQ=255)
                                                   aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaa                                                   <  2:3248447/99‑1 (MQ=255)
                                                    aGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAAc                                                 >  1:1672790/1‑100 (MQ=255)
                                                    aGCGGTGCAGGTGATCGTCCGTATTGCCGAGGTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAAc                                                 <  1:806081/100‑1 (MQ=255)
                                                      cGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCGTAAATCCAAACtt                                               >  2:3151971/1‑100 (MQ=255)
                                                        gTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAc                                             >  1:2143591/1‑100 (MQ=255)
                                                         tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAACTCCAAACTTAcc                                            <  2:2501250/100‑1 (MQ=255)
                                                           cAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCt                                          >  2:954491/1‑100 (MQ=255)
                                                            tcgcttacttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCtt                                         >  2:590303‑M2/40‑100 (MQ=255)
                                                            aGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCtt                                         >  1:2398800/1‑100 (MQ=255)
                                                             ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCATc                                        >  1:2457367/1‑100 (MQ=255)
                                                              gcttacttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGCTGCCGCATCCGGCTTAAATCCAAACTTACCCTTCg                                       >  2:1605025‑M2/38‑100 (MQ=255)
                                                               tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                      <  1:653340/100‑1 (MQ=255)
                                                               tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                      <  2:1419137/100‑1 (MQ=255)
                                                                gATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaa                                     <  1:1280356/100‑1 (MQ=255)
                                                                 aTCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaag                                    <  2:519996/100‑1 (MQ=255)
                                                                 aTCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaag                                    <  2:2545773/100‑1 (MQ=255)
                                                                   cttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaagaa                                  >  1:1357158‑M2/33‑100 (MQ=255)
                                                                     tccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                                >  2:2975740‑M2/31‑100 (MQ=255)
                                                                     TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                                >  1:2421767‑M1/1‑100 (MQ=255)
                                                                     TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                                >  1:1006698‑M1/1‑100 (MQ=255)
                                                                     TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGATTAAATCCAAACTTACCCTTCGAAGAAcc                                >  2:1209900‑M1/1‑100 (MQ=255)
                                                                     TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAAGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                                >  1:2680802‑M1/1‑100 (MQ=255)
                                                                      CCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCa                               <  2:2960851‑M1/100‑1 (MQ=255)
                                                                      CCGTATTGCCGAGTTAACGACGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTCACCCTTCGAAGAACCa                               <  2:484575‑M1/100‑1 (MQ=255)
                                                                       CGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCaa                              <  2:429674‑M1/100‑1 (MQ=255)
                                                                          aTTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATa                            <  1:206374/99‑1 (MQ=255)
                                                                             gCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAGTCCAAACTGACCCTTCGAAGAACCAATACCCg                        >  1:3180877/1‑100 (MQ=255)
                                                                             gCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCg                        <  1:2825994/100‑1 (MQ=255)
                                                                                  gTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTa                     <  1:2711463/98‑1 (MQ=255)
                                                                                    tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTACATCTAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa                 >  1:460271/1‑100 (MQ=255)
                                                                                    tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTCCCCTTCGAAGAACCAATACCCGCTAt                    >  2:3426719/1‑97 (MQ=255)
                                                                                    tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa                 >  1:2580696/1‑100 (MQ=255)
                                                                                     naCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc                >  2:3786304/2‑100 (MQ=255)
                                                                                     aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc                <  2:3445466/100‑1 (MQ=255)
                                                                                     aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc                >  1:707065/1‑100 (MQ=255)
                                                                                      aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  2:3347435/100‑1 (MQ=255)
                                                                                      aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  2:1737787/100‑1 (MQ=255)
                                                                                       cGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCa              <  1:2137417/100‑1 (MQ=255)
                                                                                          cgcAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCATTCGAAGAACCAATAACCGCTATTGAACAgcg           >  2:702749/1‑100 (MQ=255)
                                                                                            cAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgcc         >  2:279967/1‑100 (MQ=255)
                                                                                             aaCGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgccg        >  2:427017/1‑100 (MQ=255)
                                                                                               cggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCGGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCAGCTATTGACGAGcgcc         >  1:567675‑M2/5‑97 (MQ=255)
                                                                                               cggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCcgcg      <  2:2132392‑M2/96‑1 (MQ=255)
                                                                                                ggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGa     >  1:1865761‑M2/4‑100 (MQ=255)
                                                                                                   aGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCa  >  2:1190963/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCA  >  NC_000913/1186967‑1187165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.