New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 792267NA (NA)11 (0.090) 6/164 NT NA noncoding (4/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 792297 NA (NA)noncoding (34/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 167 total aligned reads displayed.

TATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA  >  NC_000913/792168‑792366
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tATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTg                                                                                                     <  2:586201/100‑1 (MQ=255)
 aTGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGg                                                                                                    >  1:1032580‑M1/1‑99 (MQ=255)
   gcgcGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgcc                                                                                                  >  1:3084238‑M1/1‑97 (MQ=255)
   gcgcGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgcc                                                                                                  <  1:3305260‑M1/100‑4 (MQ=255)
    cgcgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccg                                                                                                 >  1:2437621‑M1/1‑96 (MQ=255)
    cgcgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccg                                                                                                 >  1:9400‑M1/1‑96 (MQ=255)
     gcgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTATATATAAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccgg                                                                                                <  1:1698997‑M1/100‑6 (MQ=255)
       gATTGAGTGATTATAGAACAGAGGGGTTATGAATGATTGCGCTTTTTATCTGAATAAAGACGCGGTGGCATGCCCGCATGCGTCGAACCGTTGGCCgg                                                                                                <  1:1021080/98‑1 (MQ=255)
        aTTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGgaga                                                                                             >  2:2366953/1‑100 (MQ=255)
         ttAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGagag                                                                                            <  2:1869574/100‑1 (MQ=255)
          tAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAgg                                                                                           >  2:1752802/1‑100 (MQ=255)
              tGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGc                                                                                       >  1:3460321/1‑100 (MQ=255)
                aTTATAAAACAGAGGGTTTATGAATGATTGTGCTTTTTTTTTTTTTTTTGACGCGGTTTCAGGCCTGCATGCGTCGAACTGTTGGCCGGAGAGGGTGCTa                                                                                     >  1:2465873/1‑100 (MQ=255)
                  tataAAACAGAGGGTTTATGAAAGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAg                                                                                   >  1:2214050/1‑100 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATGTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAgg                                                                                  >  1:2036798/1‑100 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAgg                                                                                  >  1:1263023/1‑100 (MQ=255)
                    taAAACAGAGGGTTTATGAATGATTTCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGgc                                                                                 <  1:760255/100‑1 (MQ=255)
                    taAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGgc                                                                                 >  2:3366894/1‑100 (MQ=255)
                    taAAACAGAGGGTTTATGAATGATGGCGCTTTTTATCGGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGGTGGCCGGAGAGGGTGCTa                                                                                     <  1:3785040/96‑1 (MQ=255)
                      aagcAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGgcc                                                                                <  2:773848/96‑1 (MQ=255)
                        ncaGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCC                                                                             <  1:725058‑M2/99‑1 (MQ=255)
                        aCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCC                                                                             >  2:2551658‑M2/1‑100 (MQ=255)
                        aCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCC                                                                             >  1:354959‑M2/1‑100 (MQ=255)
                        aCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCC                                                                             <  2:886111‑M2/100‑1 (MQ=255)
                         cAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCT                                                                            <  1:3656747‑M2/100‑1 (MQ=255)
                             gggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccgg                                                                        <  1:1498351‑M1/100‑30 (MQ=255)
                             gggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGG                                                                        <  1:1367461‑M2/100‑1 (MQ=255)
                              ggTTTATGAATGATTGCGTTTTTTATCTTAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGG                                                                        >  1:3239077‑M2/1‑99 (MQ=255)
                              ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggc                                                                       <  2:117925‑M1/100‑31 (MQ=255)
                               gTTTATTAATGATTGGGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggcc                                                                      <  1:3289918‑M1/100‑32 (MQ=255)
                               gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggcc                                                                      <  2:1605979‑M1/100‑32 (MQ=255)
                               gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggcc                                                                      <  2:3234679‑M1/100‑32 (MQ=255)
                                 ttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAg                                                                    <  2:2745388/100‑1 (MQ=255)
                                 ttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAg                                                                    >  1:28151/1‑100 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                   <  1:340981/100‑1 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaacg                                                                  <  2:3031183‑M1/100‑36 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATACGTCGAACCGTTGgccggaggcggccttagccccctctccggccaac                                                                   <  1:481321‑M1/99‑35 (MQ=255)
                                      aatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                >  1:2537453/1‑99 (MQ=255)
                                      aatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAg                                                               <  2:2282529/100‑1 (MQ=255)
                                        tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                             >  2:1774661/1‑100 (MQ=255)
                                        tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                             <  2:1854321/100‑1 (MQ=255)
                                         gaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCAc                                                            >  2:3604342/1‑100 (MQ=255)
                                           ttGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTa                                                          <  2:1165916/100‑1 (MQ=255)
                                            tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAc                                                         >  1:1323372/1‑100 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        <  2:3203801/100‑1 (MQ=255)
                                              cgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCg                                                       <  2:3393180/100‑1 (MQ=255)
                                                cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                     >  2:68427/1‑100 (MQ=255)
                                                   tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                  <  2:2894902/100‑1 (MQ=255)
                                                   tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                  >  2:943849/1‑100 (MQ=255)
                                                   tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                  <  1:2392136/100‑1 (MQ=255)
                                                    ttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCaa                                                 <  1:1843717/100‑1 (MQ=255)
                                                     tATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAat                                                >  2:2020296/1‑100 (MQ=255)
                                                      atcaaaaaaaaGACGCGGTTTCATGCCTTCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGGCGCCTCCGGCAAGGTCAGCACTACCGACTCAat                                                <  1:2296535/94‑1 (MQ=255)
                                                      aTCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAata                                               >  2:199417/1‑100 (MQ=255)
                                                       tCTGAAAAAAGACGCGGTTTCATTCCTGCATTCTTGGAACCGTTGGCCGGAGCGGGTGATAAGGCCGCCTCCGGCAAGGTCAGCACTACCAACTTAata                                               >  1:3201629/1‑99 (MQ=255)
                                                        cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatat                                              >  1:841337/1‑99 (MQ=255)
                                                         tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                            >  2:1349652/1‑100 (MQ=255)
                                                         tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                            >  1:22956/1‑100 (MQ=255)
                                                          gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                           >  2:3019428/1‑100 (MQ=255)
                                                            aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTTCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                         <  1:2700844/100‑1 (MQ=255)
                                                            aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                         <  1:3383150/100‑1 (MQ=255)
                                                              aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                       <  1:2417861/100‑1 (MQ=255)
                                                              aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                       <  1:231857/100‑1 (MQ=255)
                                                                 gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                    >  1:2431704/1‑100 (MQ=255)
                                                                 gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATACTTTTGTc                                     <  1:2599606/99‑1 (MQ=255)
                                                                   cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGTGAGTGTGCTAGGGCCGCCTCCGGCAAGTTCAGCACTACCGACTCCATATATTTTTGTCAGc                                  >  1:2835470/1‑100 (MQ=255)
                                                                   cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGc                                  <  1:943842/100‑1 (MQ=255)
                                                                   cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGc                                  >  1:1790931/1‑100 (MQ=255)
                                                                    gcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGca                                 >  2:965569/1‑100 (MQ=255)
                                                                         ttCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAg                            <  1:1727694/100‑1 (MQ=255)
                                                                         ttCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAg                            >  1:1276573/1‑100 (MQ=255)
                                                                           cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                          >  1:3300683/1‑100 (MQ=255)
                                                                           cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                          >  2:2103697/1‑100 (MQ=255)
                                                                              gCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATa                       <  1:1998126/100‑1 (MQ=255)
                                                                              gCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATa                       <  2:1536925/100‑1 (MQ=255)
                                                                               ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGTACATAGCGATag                      <  2:2503578/100‑1 (MQ=255)
                                                                               ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGAGATag                      >  1:1847440/1‑100 (MQ=255)
                                                                                    aTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                 <  2:1308895/100‑1 (MQ=255)
                                                                                    aTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                 <  2:22957/100‑1 (MQ=255)
                                                                                     tGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCa                <  2:913904/100‑1 (MQ=255)
                                                                                      tcGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAc               <  2:3721796/99‑1 (MQ=255)
                                                                                       cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAcc              <  1:1752793/100‑1 (MQ=255)
                                                                                       cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTACAcc              >  2:1712809/1‑100 (MQ=255)
                                                                                         tCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGt            <  2:3740375/100‑1 (MQ=255)
                                                                                          ngAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTc           >  2:665312/2‑100 (MQ=255)
                                                                                          caaaCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTc           >  2:2579415/3‑100 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc          >  2:1218951/1‑100 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTc           >  1:3773518/1‑99 (MQ=255)
                                                                                            aaCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCAGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGAGAGAGTCCACCGTCCg         >  2:2807900/1‑100 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat      <  1:1445021‑M2/100‑66 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat      <  2:3031183‑M2/100‑66 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCa      <  1:1905251/100‑1 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCa      <  2:3255307/100‑1 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCa      <  1:977379/100‑1 (MQ=255)
                                                                                                gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAc     >  1:66077/1‑100 (MQ=255)
                                                                                                gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAc     >  1:46851/1‑100 (MQ=255)
                                                                                                  tGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaa   <  2:1733220‑M2/100‑69 (MQ=255)
                                                                                                  tGACCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaa   <  1:2421236‑M2/100‑69 (MQ=255)
                                                                                                   ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaac  <  2:1605979‑M2/100‑70 (MQ=255)
                                                                                                   ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaac  <  2:3234679‑M2/100‑70 (MQ=255)
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TATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA  >  NC_000913/792168‑792366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.