New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 792267NA (NA)11 (0.090) 6/164 NT NA noncoding (4/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 792297 NA (NA)noncoding (34/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 165 total aligned reads displayed.

GGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGC  >  NC_000913/792198‑792396
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ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGC                                                                                                     >  2:1588096‑M2/1‑100 (MQ=255)
 gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCa                                                                                                    <  1:2670468/100‑1 (MQ=255)
  tttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCaa                                                                                                   >  1:3601753/1‑100 (MQ=255)
  tttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCaa                                                                                                   <  2:1367469/100‑1 (MQ=255)
   ttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAg                                                                                                  >  1:28151/1‑100 (MQ=255)
   ttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAg                                                                                                  <  2:3253043/100‑1 (MQ=255)
    tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                                                 <  1:340981/100‑1 (MQ=255)
    tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                                                 <  2:2396783/100‑1 (MQ=255)
     atgaatgaTTGCGCTTTTTATCTGAAAATAGACGCGGTTTCATGCCTGCATGCGTCGAACTGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGt                                                                                                >  1:378027/1‑100 (MQ=255)
        aatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                                              >  1:2537453/1‑99 (MQ=255)
        aatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAg                                                                                             <  2:2282529/100‑1 (MQ=255)
          tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGcn                                                                                           <  1:1232799/100‑2 (MQ=255)
          tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                           >  2:1774661/1‑100 (MQ=255)
          tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                           <  2:1854321/100‑1 (MQ=255)
           gaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCAc                                                                                          >  2:3604342/1‑100 (MQ=255)
             ttGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTa                                                                                        <  2:1165916/100‑1 (MQ=255)
              tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAc                                                                                       >  1:1323372/1‑100 (MQ=255)
               gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCGGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGGACTAcc                                                                                      >  1:3373274/1‑100 (MQ=255)
               gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                                                      >  1:3546180/1‑100 (MQ=255)
               gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                                                      <  2:3203801/100‑1 (MQ=255)
                  cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                                                   >  2:68427/1‑100 (MQ=255)
                   tttttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACt                                                                                  <  1:2740210/100‑1 (MQ=255)
                     tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                                                <  1:2392136/100‑1 (MQ=255)
                     tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                                                <  2:2894902/100‑1 (MQ=255)
                        aaaaaaaaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAata                                                                             <  1:840530/95‑1 (MQ=255)
                        aTCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACtagatc                                                                             >  1:1812599/1‑95 (MQ=255)
                        aTCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAata                                                                             >  2:199417/1‑100 (MQ=255)
                         tCTGAAAAAAGACGCGGTTTCATTCCTGCATTCTTGGAACCGTTGGCCGGAGCGGGTGATAAGGCCGCCTCCGGCAAGGTCAGCACTACCAACTTAata                                                                             >  1:3201629/1‑99 (MQ=255)
                           tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                          >  1:22956/1‑100 (MQ=255)
                            gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                                                         <  1:1763689/100‑1 (MQ=255)
                            gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                                                         >  2:3019428/1‑100 (MQ=255)
                              aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                                                       <  1:3383150/100‑1 (MQ=255)
                              aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                                                       <  2:697783/100‑1 (MQ=255)
                               aaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAttttt                                                                      <  1:864643/100‑1 (MQ=255)
                                aaaGAGGCGGTTTCATGCCTGCATGCGTCAAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCTGTCAAGGTCAGTACTACCGACTCAATATATTTTTg                                                                     <  1:2297102/100‑1 (MQ=255)
                                aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                     <  2:3655660/100‑1 (MQ=255)
                                aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                     <  1:231857/100‑1 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                  >  2:585461/1‑100 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                  <  2:1217151/100‑1 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                  >  1:2431704/1‑100 (MQ=255)
                                     cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGTGAGTGTGCTAGGGCCGCCTCCGGCAAGTTCAGCACTACCGACTCCATATATTTTTGTCAGc                                                                >  1:2835470/1‑100 (MQ=255)
                                     cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGc                                                                <  1:943842/100‑1 (MQ=255)
                                        ggTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGcaca                                                             >  2:3519204/1‑100 (MQ=255)
                                         gTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACAt                                                            >  2:2640415/1‑100 (MQ=255)
                                            tCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGCGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTCCCGACTCAATATATTTTTGTCAGCACATAGc                                                         <  1:1594500/100‑1 (MQ=255)
                                             cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                                                        >  1:3300683/1‑100 (MQ=255)
                                             cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                                                        >  2:2103697/1‑100 (MQ=255)
                                                gCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATa                                                     <  1:1998126/100‑1 (MQ=255)
                                                 ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGTACATAGCGATag                                                    <  2:2503578/100‑1 (MQ=255)
                                                 ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATag                                                    <  2:3298136/100‑1 (MQ=255)
                                                 ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGAGATag                                                    >  1:1847440/1‑100 (MQ=255)
                                                     cATGCGGCCAACCGTTGGCCGGAGAGGTTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTc                                                <  1:1323915/100‑1 (MQ=255)
                                                      aTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                                               <  2:22957/100‑1 (MQ=255)
                                                      aTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                                               <  2:1308895/100‑1 (MQ=255)
                                                        gCGTCGAACCGTTGGCCGGAGATGATGCTAAGGCCTCCTTCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                                               <  1:1717306/98‑1 (MQ=255)
                                                        gCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAc                                             <  2:29760/100‑1 (MQ=255)
                                                         cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAcc                                            <  1:1752793/100‑1 (MQ=255)
                                                         cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTACAcc                                            >  2:1712809/1‑100 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                        <  1:660962/100‑1 (MQ=255)
                                                                ccGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc                                     <  2:2523234/100‑1 (MQ=255)
                                                                 cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCa                                    <  1:1905251/100‑1 (MQ=255)
                                                                 cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCa                                    <  2:2796757/100‑1 (MQ=255)
                                                                 cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCa                                    <  1:977379/100‑1 (MQ=255)
                                                                  gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAc                                   >  1:2422551/1‑100 (MQ=255)
                                                                  gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAc                                   <  2:3115901/100‑1 (MQ=255)
                                                                  gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAc                                   >  1:66077/1‑100 (MQ=255)
                                                                  gTTGGCCGGAGAGGGGGCTAAGGCCGCCTCCGGCcaacggttcgacgtatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat                                    <  1:481321‑M2/99‑66 (MQ=255)
                                                                    tGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaa                                 <  2:1733220‑M2/100‑69 (MQ=255)
                                                                    tGACCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaa                                 <  1:2421236‑M2/100‑69 (MQ=255)
                                                                      gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAAc                               <  1:1883706/100‑1 (MQ=255)
                                                                      gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAAc                               >  2:617751/1‑100 (MQ=255)
                                                                       ccGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgccttttttcagataaaaagcgcactcactcatcaaccc                              <  1:2503060‑M2/100‑72 (MQ=255)
                                                                        cGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACtn                             <  2:174560/100‑2 (MQ=255)
                                                                          gagaGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCaa                           <  2:1323380/100‑1 (MQ=255)
                                                                              gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                       >  2:2815320/1‑100 (MQ=255)
                                                                              gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                       >  2:3724313/1‑100 (MQ=255)
                                                                              gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                       >  1:2128904/1‑100 (MQ=255)
                                                                              gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                       >  1:2709601/1‑100 (MQ=255)
                                                                                gTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGAt                     >  1:879090/1‑100 (MQ=255)
                                                                                  gCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATgg                   <  2:9401/100‑1 (MQ=255)
                                                                                   cTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATggg                  <  2:2699823/100‑1 (MQ=255)
                                                                                    tgaccttgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGt                 >  1:3287308/8‑100 (MQ=255)
                                                                                    tAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATggn                  <  1:1577012/99‑2 (MQ=255)
                                                                                    tAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTGGTCAGCACATAGTGATAGAGTCCACCGGCCGGCACGAACTCAAGACGATg                    >  1:2866211/1‑97 (MQ=255)
                                                                                     aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa                >  2:1863050/1‑100 (MQ=255)
                                                                                     aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa                >  2:902999/1‑100 (MQ=255)
                                                                                       ggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAAt              <  2:1752745/100‑1 (MQ=255)
                                                                                       ggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAAt              >  2:1661112/1‑100 (MQ=255)
                                                                                       ggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAAt              >  2:937373/1‑100 (MQ=255)
                                                                                          cgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAca           >  1:1490124/1‑100 (MQ=255)
                                                                                              tCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcg       >  2:96126‑M2/1‑6 (MQ=255)
                                                                                              tCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcg       <  2:3031138‑M2/100‑95 (MQ=255)
                                                                                                cGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcg     >  1:2437621‑M2/1‑4 (MQ=255)
                                                                                                cGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggcagg     <  2:386056/100‑1 (MQ=255)
                                                                                                cGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggcagg     <  2:3364909/100‑1 (MQ=255)
                                                                                                 ggCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgc    >  1:3084238‑M2/1‑3 (MQ=255)
                                                                                                 ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACaggcaggc    >  2:158365/1‑100 (MQ=255)
                                                                                                  gCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgca   >  1:411969‑M2/1‑2 (MQ=255)
                                                                                                  gCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGgcg   <  1:2474557/100‑1 (MQ=255)
                                                                                                   ccaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgcat  >  1:1032580‑M2/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCGC  >  NC_000913/792198‑792396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.