New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4608119 =124 (0.920)10 (0.080) 6/166 NT 7.4% coding (317/414 nt) holD DNA polymerase III, psi subunit
?NC_000913 4608161 = 134 (1.060)coding (359/414 nt) holD DNA polymerase III, psi subunit
Rejected: Frequency below cutoff threshold.

Only 100 of 176 total aligned reads displayed.

GTTGGCGGTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGCCTTTC  >  NC_000913/4608062‑4608260
                                                                                                   |                                                                                                   
 ttGGCGGTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCcgcg                                                                                                    <  2:1690424/100‑1 (MQ=255)
 tcagtcgtttcgagggaagaaatcgtgttcatatgtgcaaatttgttgccataacgCGGCGCTCACCGATTTACGGGCAAACCCAATGGCACGCGCcgcg                                                                                                    >  1:2656949‑M1/57‑100 (MQ=255)
  cagtcgtttcgagggaagaaatcgtgttcatatgtgcaaatttgttgccataacgCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGt                                                                                                   >  2:2435968‑M1/56‑100 (MQ=255)
   agtcgtttcgagggaagaaatcgtgttcatatgtgcaaatttgttgccataacgCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGtt                                                                                                  >  1:1913332‑M1/55‑100 (MQ=255)
     cGGTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTAt                                                                                                >  2:1274352/1‑100 (MQ=255)
      ggTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATg                                                                                               <  1:657990/100‑1 (MQ=255)
        ttGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGc                                                                                             <  1:723077/100‑1 (MQ=255)
            ntACTGACGAACCGCTATCACTAGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGcaaca                                                                                         >  1:2209501/2‑100 (MQ=255)
            gTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGcaaca                                                                                         >  2:1754951/1‑100 (MQ=255)
            gTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGcaaca                                                                                         >  2:2473314/1‑100 (MQ=255)
               cTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAAt                                                                                      >  2:768554/1‑100 (MQ=255)
               cTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAAt                                                                                      >  2:2106707/1‑100 (MQ=255)
                 gACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAAttt                                                                                    >  2:2186221/1‑100 (MQ=255)
                 gACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAAttt                                                                                    >  2:2638207/1‑100 (MQ=255)
                 gACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAAttt                                                                                    >  1:3379469/1‑100 (MQ=255)
                 gACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGACAAACCCAACGGCACGCGCCGCGTTATGCCAACAAAtt                                                                                     >  1:3277384/1‑99 (MQ=255)
                  aCGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTg                                                                                   <  1:1720806/100‑1 (MQ=255)
                  aCGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTg                                                                                   <  2:3144283/100‑1 (MQ=255)
                   cGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGc                                                                                  >  1:1828933/1‑100 (MQ=255)
                    gAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGca                                                                                 <  2:1822946/100‑1 (MQ=255)
                     aaCCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGcac                                                                                <  1:107281/100‑1 (MQ=255)
                     aaCCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGca                                                                                 <  1:3460818/99‑1 (MQ=255)
                      aCCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGcaca                                                                               <  2:2547482/100‑1 (MQ=255)
                         gCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACatat                                                                            >  2:2860712/1‑100 (MQ=255)
                          cTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATg                                                                           <  2:2209511/100‑1 (MQ=255)
                          cTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATg                                                                           <  1:1937452/100‑1 (MQ=255)
                          cTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATg                                                                           >  2:198206/1‑100 (MQ=255)
                          cTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATg                                                                           <  1:3079482/100‑1 (MQ=255)
                            aTCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGaa                                                                         >  1:89030/1‑100 (MQ=255)
                            aTCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTGACGTGCAAAACCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGa                                                                          <  2:1435408/99‑1 (MQ=255)
                              cACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAaca                                                                       >  1:3346157/1‑100 (MQ=255)
                              cACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAaca                                                                       >  2:630453/1‑100 (MQ=255)
                               aCTGGAAGGCGCTCAGGTTGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAacac                                                                      <  1:1427267/100‑1 (MQ=255)
                                cTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACg                                                                     >  1:3664555/1‑100 (MQ=255)
                                 tGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGa                                                                    <  1:877339/100‑1 (MQ=255)
                                 tGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGa                                                                    >  2:3029329/1‑100 (MQ=255)
                                  ggAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGAt                                                                   >  2:3735894/1‑100 (MQ=255)
                                  ggAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGAt                                                                   <  2:631353/100‑1 (MQ=255)
                                    aaGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGAt                                                                   >  1:1202200/1‑98 (MQ=255)
                                    aaGGCGCTCACGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATAGCAACAAATTTGCACATATGAACACGAttt                                                                 <  1:2499324/100‑1 (MQ=255)
                                      gacgcTCAGGTGGGATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATttct                                                               >  2:2586426/3‑100 (MQ=255)
                                       gcgcTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATttctt                                                              <  1:1665024/100‑1 (MQ=255)
                                        cgcTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATttcttc                                                             >  2:2421640/1‑100 (MQ=255)
                                        cgcTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATttcttc                                                             <  1:1993713/100‑1 (MQ=255)
                                         gcTCAGGTGGCATCAGCGGCGCTCACCAATTTACGCGCAAACCCATCGGCACGAGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATttcttc                                                             <  1:3595604/99‑1 (MQ=255)
                                            cAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACAAGAtcggaagagcg                                                         >  1:1872074/1‑90 (MQ=255)
                                              ggTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCCACAAATTTGCACATATGAACACGATTTCTTCCCTCGa                                                       >  1:737509/1‑100 (MQ=255)
                                              ggTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGa                                                       >  1:3046670/1‑100 (MQ=255)
                                              ggTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGa                                                       >  2:2947044/1‑100 (MQ=255)
                                                 ggCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAAc                                                    <  2:418800/100‑1 (MQ=255)
                                                    aTCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATCTGCACATATGAACACGATTTCTTCCCTCGAAACGa                                                  >  1:255256/1‑99 (MQ=255)
                                                      cACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTg                                               >  2:3606902/1‑100 (MQ=255)
                                                       aCCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGa                                              <  1:2412293/100‑1 (MQ=255)
                                                        gcggcgcgtgccgttgggtttgcccgtaaatcggtgagcgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGAt                                             >  2:577091‑M2/44‑100 (MQ=255)
                                                        ccGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGCACACGATTTCTTCCCTCGAAACGACt                                                >  1:1331848/1‑97 (MQ=255)
                                                        ccGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGa                                              <  1:1524145/99‑1 (MQ=255)
                                                        ccGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGAt                                             >  1:1044700/1‑100 (MQ=255)
                                                         cggcgcgtgccgttgggtttgaccgtaaatcggtgagcgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGAtt                                            >  1:506039‑M2/43‑100 (MQ=255)
                                                         CGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGAtt                                            <  1:503547‑M1/100‑1 (MQ=255)
                                                          ggcgcgtgccgttgggtttgcccgtaaatcggtgagcgccgCGTTATGGCAACAAATTTGCACCTATGAACACGATTTCTTCCCTCGAAACGACTGAtt                                            >  2:3501749‑M2/42‑99 (MQ=255)
                                                          ggcgcgtgccgttgggtttgcccgtaaatcggtgagcgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCGTCGAAACGACTGAttt                                           >  1:3393653‑M2/42‑100 (MQ=255)
                                                          ggcgcgtgccgttgggtttgcccgtaaatcggtgagcgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAAAGACTGAttt                                           >  1:1890859‑M2/42‑100 (MQ=255)
                                                           GCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTa                                          >  1:1350724‑M1/1‑100 (MQ=255)
                                                             GCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTAcc                                        >  2:3317827‑M1/1‑100 (MQ=255)
                                                             GCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTAcc                                        >  1:984632‑M1/1‑100 (MQ=255)
                                                               tCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAAGGACTGATTTACcgg                                      >  2:3570342/1‑100 (MQ=255)
                                                               tCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACcgg                                      >  2:2465124/1‑100 (MQ=255)
                                                               tCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACcgg                                      <  1:286405/100‑1 (MQ=255)
                                                                cACCGATTTACGGGCAAGCCCAAGGGGACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACcggc                                     <  1:3597623/100‑1 (MQ=255)
                                                                  ccGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACcggcgg                                   >  2:3797629/1‑100 (MQ=255)
                                                                   cGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCggcggc                                  <  1:628898/100‑1 (MQ=255)
                                                                   cGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCggcggc                                  <  2:1142913/100‑1 (MQ=255)
                                                                        tACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTAcc                             >  1:563728/1‑100 (MQ=255)
                                                                        tACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTAcc                             <  1:858898/100‑1 (MQ=255)
                                                                          cGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACcac                           >  2:1634148/1‑100 (MQ=255)
                                                                          cGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACcac                           <  1:317030/100‑1 (MQ=255)
                                                                            ggCAAACCCAACGGCGCGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACAt                         >  1:2675303/1‑100 (MQ=255)
                                                                            ggCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAGCACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACAt                         >  2:522386/1‑100 (MQ=255)
                                                                            ggCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACAt                         >  2:2892899/1‑100 (MQ=255)
                                                                            ggCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACAt                         <  1:2743804/100‑1 (MQ=255)
                                                                             gCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACAt                         <  1:3114608/99‑1 (MQ=255)
                                                                              cAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTg                       >  2:3359203/1‑100 (MQ=255)
                                                                               aaaCCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGa                      <  2:2181429/100‑1 (MQ=255)
                                                                                 aCCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGaac                    <  1:3720213/100‑1 (MQ=255)
                                                                                 aCCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGaac                    >  2:3214393/1‑100 (MQ=255)
                                                                                 aCCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGaac                    <  2:2233719/100‑1 (MQ=255)
                                                                                  cccAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGaaca                   >  2:1225304/1‑100 (MQ=255)
                                                                                     aaCGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACCGATTTACCGGCGGCTTACCACATTGAACAAcg                >  1:1015320/1‑100 (MQ=255)
                                                                                            cgcgCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGGAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCAc         >  2:2722480/1‑100 (MQ=255)
                                                                                             gcgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGACACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACg        >  2:855862‑M2/7‑100 (MQ=255)
                                                                                             gcgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACg        <  1:969897‑M2/94‑1 (MQ=255)
                                                                                              cgccgCTTTATGGCAACAAATTTGCACGTATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCTTCTTACCCCATTGAACAACGCGCCCACg        <  1:2324065‑M2/94‑1 (MQ=255)
                                                                                              cgccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGc       >  2:3086590‑M2/6‑100 (MQ=255)
                                                                                               gccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGcc      <  1:2933317‑M2/96‑1 (MQ=255)
                                                                                               gccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGcc      <  1:2979132‑M2/96‑1 (MQ=255)
                                                                                               gccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGcc      <  1:905312‑M2/96‑1 (MQ=255)
                                                                                               gccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGcc      <  2:1464236‑M2/96‑1 (MQ=255)
                                                                                               gccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGcc      >  2:1323115‑M2/5‑100 (MQ=255)
                                                                                                ccgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGCCt     >  2:684164‑M2/4‑100 (MQ=255)
                                                                                                 cgCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGcc      <  1:2180404‑M2/96‑1 (MQ=255)
                                                                                                   |                                                                                                   
GTTGGCGGTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGCCTTTC  >  NC_000913/4608062‑4608260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.