New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 689269 =NA (NA)5 (0.040) 4/166 NT NA noncoding (6/34 nt) REP59 (repetitive extragenic palindromic) element; contains 1 REP sequences REP59 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 689297 = NA (NA)noncoding (34/34 nt) REP59 (repetitive extragenic palindromic) element; contains 1 REP sequences REP59 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 178 total aligned reads displayed.

TGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGC  >  NC_000913/689198‑689396
                                                                                                   |                                                                                                   
tGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGt                                                                                                     >  1:2798851/1‑100 (MQ=255)
tGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGt                                                                                                     >  2:714128/1‑100 (MQ=255)
tGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGt                                                                                                     >  2:2969139/1‑100 (MQ=255)
 tgtctgcgtcagcgacgtaaataatcccttcttatcgtgccggaatacatcccatatttcggcacgctcaCCGGATAATGCACTGATGCCGCATCCGGTg                                                                                                    >  2:1663760‑M1/71‑100 (MQ=255)
 gCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTg                                                                                                    >  1:2904313/1‑100 (MQ=255)
  gtctgcgtcagcgacgtaaataatcccttcttatcgtgccggaatacatcccatatttcggcacgctcaCCGGATAATGCACTGATGCCGCATCCGGTGa                                                                                                   <  1:1663751‑M1/31‑1 (MQ=255)
  cTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGa                                                                                                   >  2:1768459/1‑100 (MQ=255)
  cTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGa                                                                                                   >  1:592995/1‑100 (MQ=255)
   tGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAg                                                                                                  >  2:797330/1‑100 (MQ=255)
    ctgcgtcagcgacgtaaataatcccttcttatcgtgccgagacacagcccatatttcggcacgctcaCCGGATAATGCACTGATGCCGCATCCGGTGAGc                                                                                                 >  1:1655974‑M1/68‑100 (MQ=255)
     tttCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCg                                                                                                >  2:1323852/1‑100 (MQ=255)
     tgcgtcagcgacgtaaataatcccttcttatcgtgccggaatacatcccatatttcggcacgctcaCCGGATAATGCACTGATGCCGCATCCGGTGAGCg                                                                                                >  1:943731‑M1/67‑100 (MQ=255)
       tCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGt                                                                                               >  1:2709480/1‑99 (MQ=255)
        cAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGc                                                                                             >  1:2293010/1‑100 (MQ=255)
         aGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGcc                                                                                            >  2:40414/1‑100 (MQ=255)
          gggTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATACTGCACTGATGCCGCATCCGGTGAGCGTGCCg                                                                                           >  2:3217395/1‑100 (MQ=255)
          gggTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCg                                                                                           <  2:623714/100‑1 (MQ=255)
            gTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGaa                                                                                         >  2:2849084/1‑100 (MQ=255)
                gCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAatat                                                                                     >  2:3778948/1‑100 (MQ=255)
                gCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAatat                                                                                     >  2:1677776/1‑100 (MQ=255)
                 ccTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATg                                                                                    <  2:1557301/100‑1 (MQ=255)
                 ccTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATg                                                                                    <  1:1867787/100‑1 (MQ=255)
                 ccTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATg                                                                                    >  1:1411148/1‑100 (MQ=255)
                  cTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATgg                                                                                   <  1:358596/100‑1 (MQ=255)
                  cTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGAGTGCCGAAATATg                                                                                    >  2:251350/1‑99 (MQ=255)
                   ttGTATAACAAAGCAATAAATGTGCAAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGTACGGATGCCGCATCCGGTGAGCGTGCCGAAATATggg                                                                                  <  1:3393950/100‑1 (MQ=255)
                   ttGTATAACAAAGCAAGAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATggg                                                                                  <  2:1583995/100‑1 (MQ=255)
                    ngTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGGAatacatcc                                                                                 >  1:1574165/2‑95 (MQ=255)
                      tataACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATg                                                                               >  2:2105151/1‑100 (MQ=255)
                        taACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGGAatacatcccata                                                                             >  1:3740721/1‑91 (MQ=255)
                        taACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTa                                                                             >  1:107711/1‑100 (MQ=255)
                        taACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTa                                                                             >  2:3684648/1‑100 (MQ=255)
                        taACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTa                                                                             >  2:3710562/1‑100 (MQ=255)
                          aCAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTAtt                                                                           >  1:912135/1‑100 (MQ=255)
                           cAAAGCAATAGATGTGCCAACGCTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTAtt                                                                           >  1:2278410/1‑99 (MQ=255)
                             aaGCAATAGATGTGCCAAAGTTGGATAGGAGAACATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCg                                                                        >  1:1395814/1‑100 (MQ=255)
                              aGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCgg                                                                       <  2:397329/100‑1 (MQ=255)
                              aGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCgg                                                                       <  2:574915/100‑1 (MQ=255)
                               gCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGCAATATGGGATGTATTCCGGc                                                                      >  2:2847382/1‑100 (MQ=255)
                               gCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGc                                                                      <  1:4704/100‑1 (MQ=255)
                               gCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGc                                                                      >  1:994938/1‑100 (MQ=255)
                                 aaTAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCAc                                                                    <  2:2907502/100‑1 (MQ=255)
                                 aaTAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCAc                                                                    <  2:2518216/100‑1 (MQ=255)
                                     gATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGAt                                                                 >  2:1367482/1‑99 (MQ=255)
                                     gATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATa                                                                >  1:194440/1‑100 (MQ=255)
                                     gATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATa                                                                >  2:1882494/1‑100 (MQ=255)
                                     gATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATa                                                                >  2:226028/1‑100 (MQ=255)
                                     gATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATa                                                                <  2:2389694/100‑1 (MQ=255)
                                     gATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATa                                                                <  1:399544/100‑1 (MQ=255)
                                       tgtgCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaag                                                              >  2:3639369/1‑100 (MQ=255)
                                          gCCAAAGTTGGATAGGAGAATCTTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGCTGTATTCCCGCTCGATaggaag                                                           >  1:3012196/1‑100 (MQ=255)
                                          gCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaagaag                                                           >  2:1410713/1‑100 (MQ=255)
                                          gCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaagaag                                                           >  2:530575/1‑100 (MQ=255)
                                          gCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaagaag                                                           >  1:1809235/1‑100 (MQ=255)
                                          gCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATaagaa                                                            >  2:2881244/1‑99 (MQ=255)
                                          gCCAAAGTTGGATAGGAGAATAAAGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGAGGTATTCCGGCACGAAaaga                                                             >  1:89116/1‑98 (MQ=255)
                                            cAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAggg                                                         >  1:953560/1‑100 (MQ=255)
                                             aaaGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGa                                                        >  1:2601897/1‑100 (MQ=255)
                                             aaaGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGa                                                        <  1:284293/100‑1 (MQ=255)
                                               aGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGatt                                                      <  2:3402184/100‑1 (MQ=255)
                                                gTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGatta                                                     >  2:2276877/1‑100 (MQ=255)
                                                    gATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTa                                                 <  2:1812210/100‑1 (MQ=255)
                                                    gATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTa                                                 <  2:912142/100‑1 (MQ=255)
                                                     aTAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTAc                                                <  2:1334075/100‑1 (MQ=255)
                                                        ggAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTc                                             >  1:1196250/1‑100 (MQ=255)
                                                        ggAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTc                                             >  2:3156086/1‑100 (MQ=255)
                                                        ggAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTc                                             >  1:2728400/1‑100 (MQ=255)
                                                         gagaATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCg                                            <  2:3311109/100‑1 (MQ=255)
                                                         gagaATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCg                                            >  1:700278/1‑100 (MQ=255)
                                                           gaATATTGTTATCCGGATAATGCACTGATGGCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTACGGGACGATAAGAAGGGATTAATTAAGtgg                                            >  1:3488549/1‑96 (MQ=255)
                                                             atatTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGGTAAGAAGGGATTATTTACGTCGCTGa                                        >  1:2209409/1‑100 (MQ=255)
                                                             atatTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGa                                        <  2:2901024/100‑1 (MQ=255)
                                                              tatTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGAc                                       <  1:54512/100‑1 (MQ=255)
                                                               atTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACg                                      <  2:2313876/100‑1 (MQ=255)
                                                                ttGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGGGTCGAAATATGGGATGTATTCCGGCACGTTAAGGAGGGATTATTTAAGTCGCTGACGc                                     >  1:2477399/1‑100 (MQ=255)
                                                                  gTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAg                                   >  1:1708470/1‑100 (MQ=255)
                                                                    tATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGAc                                 <  2:1962041/100‑1 (MQ=255)
                                                                     caccggatgcggcatcagtgcattatccggTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGAGAACCAGGGATAATATACGTCGCTGAAGCCGa                                  >  1:1984074‑M2/31‑98 (MQ=255)
                                                                        CGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACtcat                             >  2:2697984‑M1/1‑100 (MQ=255)
                                                                          GATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACtcatca                           >  2:418183‑M1/1‑100 (MQ=255)
                                                                            TAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAAc                         >  2:1615882‑M1/1‑100 (MQ=255)
                                                                            TAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAAc                         <  1:1777589‑M1/100‑1 (MQ=255)
                                                                            TAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAAc                         >  2:3091809‑M1/1‑100 (MQ=255)
                                                                              aTGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAacac                       <  2:3221829/100‑1 (MQ=255)
                                                                               tccACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAAcaca                      >  2:2578399/3‑100 (MQ=255)
                                                                               tGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAAcaca                      <  2:1176433/100‑1 (MQ=255)
                                                                                 cACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc                    >  2:1973892/1‑100 (MQ=255)
                                                                                 cACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc                    >  2:937066/1‑100 (MQ=255)
                                                                                 cACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagc                    >  2:47729/1‑100 (MQ=255)
                                                                                  attGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagca                   >  1:1305579/3‑100 (MQ=255)
                                                                                   cTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACAcagcag                  <  2:2965815/100‑1 (MQ=255)
                                                                                     gATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAgcagca                >  1:1350272/1‑100 (MQ=255)
                                                                                     gATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAgcagca                <  2:169741/100‑1 (MQ=255)
                                                                                          cGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAAcc           <  2:1388907/100‑1 (MQ=255)
                                                                                            cATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCaa         >  1:19030/1‑100 (MQ=255)
                                                                                              tccggTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAAc       >  1:2533127‑M2/6‑100 (MQ=255)
                                                                                                cggTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACaa     >  2:2362201‑M2/4‑100 (MQ=255)
                                                                                                 ggTGAGCGTGACTAAATATGGAATGTATTCCTGAACGATAAGAAGGGATTATTTACGTAGCTGACGCAAACTCATCAACACAGCAGCAAAACCAAAc       <  1:2432368/97‑1 (MQ=255)
                                                                                                   tGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGc  <  2:2016158/100‑1 (MQ=255)
                                                                                                   tGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGc  <  1:2915797/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGCTGTTTCAGGGTTTGCCTTGTATAACAAAGCAATAGATGTGCCAAAGTTGGATAGGAGAATATTGTTATCCGGATAATGCACTGATGCCGCATCCGGTGAGCGTGCCGAAATATGGGATGTATTCCGGCACGATAAGAAGGGATTATTTACGTCGCTGACGCAGACTCATCAACACAGCAGCAAAACCAAACAATGC  >  NC_000913/689198‑689396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.