Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,033 IS1 (+) +9 bp 100% intergenic (‑111/‑486) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)105 (0.740) 66/178 NT 99.0% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293033 = 1 (0.010)intergenic (‑111/‑494) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 12930411 (0.010)119 (0.840) 82/178 NT 99.1% intergenic (‑119/‑486) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 108 total aligned reads displayed.

GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050448‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA  >  NC_000913/1293033‑1293128
                                                                                                                                                                                                  
GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTG                                                                                                >  1:2160055/1‑100
 GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGT                                                                                               >  2:615289/1‑100
     TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCG                                                                                           >  2:3866260/1‑100
     TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCC                                                                                            >  2:2819292/1‑99
      CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGC                                                                                          >  2:1387952/1‑100
       GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCC                                                                                         <  1:1995910/100‑1
       GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCC                                                                                         <  2:382903/100‑1
            CGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAA                                                                                    >  2:1801040/1‑100
            CGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAA                                                                                    >  2:1800477/1‑100
            CGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAA                                                                                    >  1:1470862/1‑100
            CGTTCTCAAAACCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAA                                                                                    <  1:799253/100‑1
             GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAA                                                                                   <  2:877474/100‑1
             GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAA                                                                                   <  2:829389/100‑1
              TTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAAT                                                                                  >  2:1704619/1‑100
               TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATA                                                                                 >  2:3133194/1‑100
               TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGAATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATA                                                                                 <  2:3444760/100‑1
                CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATAT                                                                                >  2:3706501/1‑100
                CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATAT                                                                                >  2:1282829/1‑100
                 TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                               <  2:3776913/100‑1
                 TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATC                                                                               >  1:622165/1‑100
                  CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCT                                                                              >  1:2579966/1‑100
                  CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCT                                                                              <  1:3706529/100‑1
                   AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTT                                                                             <  1:2438971/100‑1
                     AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTT                                                                           <  2:1701697/100‑1
                      ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTC                                                                          <  1:1875493/100‑1
                           TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAA                                                                     <  1:1298510/100‑1
                             GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAAT                                                                   <  2:434121/100‑1
                              AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATT                                                                  <  2:3946435/100‑1
                                CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAG                                                                <  2:1827266/100‑1
                                 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC                                                               >  2:1656263/1‑100
                                 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC                                                               >  1:3082348/1‑100
                                 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC                                                               >  2:1669427/1‑100
                                  GCATGTCAAATTCATCGGGCATTATCTGAACATAAAACACGATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAAT                                                                   <  2:3718369/95‑1
                                  GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                              <  2:1696909/100‑1
                                  GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                              >  2:733066/1‑100
                                  GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                              <  2:2169394/100‑1
                                  GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC                                                              <  1:2854685/100‑1
                                   CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGACAATAAATATCTTTTCATAAAATTAGCCA                                                             >  2:1278600/1‑100
                                    ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG                                                            >  1:3588032/1‑100
                                    ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG                                                            >  2:237781/1‑100
                                     TGACAAAGTCATCGGGCATGATCTGAACATAAAACACTATCAATAAGTTGGAGTCAATACCTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGA                                                           <  2:3261562/100‑1
                                       ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAA                                                         <  1:788880/100‑1
                                        CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAA                                                        >  1:263808/1‑100
                                         AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAG                                                       >  2:604953/1‑100
                                          AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGn                                                      <  2:473734/100‑2
                                          AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGA                                                      <  2:3605231/100‑1
                                            GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACG                                                    >  1:2429038/1‑100
                                               ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGG                                                 >  2:1268882/1‑100
                                               ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGG                                                 >  2:248016/1‑100
                                               ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGG                                                 <  1:3924257/100‑1
                                                 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA                                               <  1:2973449/100‑1
                                                 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA                                               >  1:3686995/1‑100
                                                 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA                                               <  2:3019819/100‑1
                                                   GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA                                             >  2:559854/1‑100
                                                     CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATA                                           <  2:2805486/100‑1
                                                        TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC                                        <  1:604956/100‑1
                                                         ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGAGGCATATAGCCC                                       >  1:3755402/1‑100
                                                          TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCT                                      >  2:2062081/1‑100
                                                           CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTA                                     >  2:2678021/1‑100
                                                           CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTA                                     >  1:1231026/1‑100
                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                    >  2:1844484/1‑100
                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                    >  1:1128277/1‑100
                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                    >  2:1625849/1‑100
                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                    >  1:159149/1‑100
                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                    >  1:950220/1‑100
                                                            TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGACGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT                                    >  2:2645409/1‑100
                                                              AACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT                                  <  1:3174527/100‑1
                                                              AACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT                                  <  2:2960867/100‑1
                                                              AACATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT                                  <  2:1419721/100‑1
                                                                CATAAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC                                <  1:1960719/100‑1
                                                                   AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                             <  2:1318908/100‑1
                                                                   AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                             <  1:1375019/100‑1
                                                                   AAAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC                             <  2:1481068/100‑1
                                                                    AAACACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCG                            <  2:1788028/100‑1
                                                                       CACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATG                         <  1:1184155/100‑1
                                                                       CACTATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATG                         <  1:1256156/100‑1
                                                                       CACTATCAATAAGTTGGAGACATTACCTGTCCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATt                         <  2:3627774/100‑2
                                                                          TATCAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCACATAGCCCTATTTACACCGATGATT                      >  1:2680519/1‑100
                                                                             CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                   <  2:739011/100‑1
                                                                             CAATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG                   >  1:1589944/1‑100
                                                                              AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGCACAGACGCGGCATATATCCCTATTTACACCGATGATTTCGC                  >  2:1617326/1‑100
                                                                              AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                  <  2:2556655/100‑1
                                                                              AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                  <  1:3187766/100‑1
                                                                              AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                  <  1:3214643/100‑1
                                                                              AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                  >  1:1886428/1‑100
                                                                              AATAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC                  >  1:1748282/1‑100
                                                                               ATAAGTTGGAGGCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCA                 >  1:2755845/1‑100
                                                                                TAAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAG                <  1:1518380/100‑1
                                                                                 AAGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGC               <  2:3736615/100‑1
                                                                                  AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCA              >  1:2568875/1‑100
                                                                                  AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCA              <  2:618487/100‑1
                                                                                  AGTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCA              >  1:260296/1‑100
                                                                                   GTTGGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATACAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCc              >  2:2388801/1‑98
                                                                                      GGAGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGCAGCGGCATATAGCCCTATTTACACAGATGATTTCGCAGCACATG          >  2:3851047/1‑100
                                                                                       GAGGCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGA         <  2:1296098/100‑1
                                                                                        AGTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAG        <  2:773682/100‑1
                                                                                         GTCATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGG       <  1:1423477/100‑1
                                                                                            ATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTA    >  1:1990112/1‑100
                                                                                            ATTACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTA    >  2:674140/1‑100
                                                                                              TACCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA  <  1:1120158/100‑1
                                                                                                                                                                                                  
GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1050448‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAA  >  NC_000913/1293033‑1293128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.