Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,033 IS1 (+) +9 bp 100% intergenic (‑111/‑486) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)105 (0.740) 66/178 NT 99.0% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293033 = 1 (0.010)intergenic (‑111/‑494) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 12930411 (0.010)119 (0.840) 82/178 NT 99.1% intergenic (‑119/‑486) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 129 total aligned reads displayed.

ATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1292943‑1293041
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  NC_000913/1979270‑1979172
                                                                                                                                                                                                      
ATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCG                                                                                                    <  1:3255756/100‑1
 TTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGG                                                                                                   >  1:1113805/1‑100
 TTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTACTTTGTGCCGCCGG                                                                                                   <  1:2653454/100‑1
   GGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTG                                                                                                 <  2:3259046/100‑1
   GGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTG                                                                                                 >  2:1977150/1‑100
    GGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGA                                                                                                <  2:1500196/100‑1
     GGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGAT                                                                                               >  1:3033116/1‑100
      GTGGTTTGTTGAGGTAATAATAGATCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGAT                                                                                               <  1:3423854/99‑1
        GGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCT                                                                                            >  1:2698133/1‑100
        GGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCT                                                                                            >  2:3489687/1‑100
        GGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCT                                                                                            >  1:3566633/1‑100
           TTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGC                                                                                          <  2:830836/99‑1
           TTGTTGAAGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCC                                                                                         <  2:1268924/100‑1
              TTGAGGTAATAATCGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAGAATTGTTCTTTGTTTTGTGCCGCCGGTGATGCTGCCAAC                                                                                      >  2:2696409/1‑100
              TTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAAC                                                                                      <  2:1744208/100‑1
                  GGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTAC                                                                                  >  1:2841247/1‑100
                  GGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTAC                                                                                  >  1:136695/1‑100
                   GTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACT                                                                                 <  1:3070341/100‑1
                   GTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACT                                                                                 <  1:2134264/100‑1
                   GTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACT                                                                                 <  2:793571/100‑1
                   GTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACT                                                                                 <  1:757634/100‑1
                     AATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGA                                                                               <  1:1977160/100‑1
                      ATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGAT                                                                              >  2:3054326/1‑100
                       TAATAGAGCCTTAAATTCAGTTGTGCGATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATT                                                                             >  1:2394016/1‑100
                       TAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATT                                                                             <  2:1557393/100‑1
                         ATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGGGATGCTGCCAACTTACTGATTTA                                                                           >  2:1873454/1‑100
                           AGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATACTGCCAACTTACTGATTTAGT                                                                         >  2:259332/1‑100
                            GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                        >  1:2380171/1‑100
                            GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                        <  2:387888/100‑1
                            GAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                        >  2:126448/1‑100
                              GCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                                      >  1:915768/1‑100
                              GCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTA                                                                      >  1:867084/1‑100
                               CCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTAT                                                                     >  1:3626889/1‑100
                               CCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTAT                                                                     >  1:2043055/1‑100
                               CCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTAT                                                                     >  1:1412568/1‑100
                                CTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATG                                                                    >  1:2978336/1‑100
                                    AATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                <  1:3026358/100‑1
                                    AATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGG                                                                >  2:1194013/1‑100
                                     ATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGT                                                               >  1:361042/1‑100
                                      TTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG                                                              <  2:2698116/100‑1
                                          GTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                          <  1:3120938/100‑1
                                          GTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                          <  2:165893/100‑1
                                            TGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG                                                        <  1:1203097/100‑1
                                            TGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTG                                                        <  1:1604090/100‑1
                                             GTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                                       <  2:136695/100‑1
                                             GTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGA                                                       <  2:820337/100‑1
                                              TGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                      >  1:1548108/1‑100
                                               GCAATAGCCAGGGATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                     <  2:3166467/100‑1
                                               GCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                     >  2:1205259/1‑100
                                               GCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGG                                                     >  1:3728720/1‑100
                                                 AATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGACAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTG                                                   >  2:3828669/1‑100
                                                    AGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC                                                >  1:1746661/1‑100
                                                     GCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                               >  1:898060/1‑100
                                                     GCCAGGAATGTAAGGAATCCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC                                               <  1:3840797/100‑1
                                                       CAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                             >  1:195887/1‑100
                                                        AGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                            <  2:3735219/100‑1
                                                           AATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC                                         >  1:1918822/1‑100
                                                            ATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                        >  1:327942/1‑100
                                                              GTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                      >  1:3012070/1‑100
                                                               TAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT                                     >  2:3751619/1‑100
                                                                AAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTG                                    >  1:2271019/1‑100
                                                                 AGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGTTTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGT                                   >  2:3163944/1‑100
                                                                  GGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                  <  2:2301501/100‑1
                                                                  GGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                  <  1:2944595/100‑1
                                                                  GGAATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTT                                  >  1:2412050/1‑100
                                                                    AATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                                <  1:3799691/100‑1
                                                                    AATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTC                                <  2:1128468/100‑1
                                                                     ATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                               >  1:1771936/1‑100
                                                                     ATTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                               >  1:403842/1‑100
                                                                      TTCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTA                              >  1:2291490/1‑100
                                                                       TCAAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                             >  1:2541634/1‑100
                                                                         AAAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                           >  1:3100360/1‑100
                                                                          AAATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAG                          >  1:2753288/1‑100
                                                                           AATTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGC                         <  1:2878945/100‑1
                                                                             TTGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG                       <  1:914066/100‑1
                                                                              TGTTCTTTATTTTGTGCCGCCGGTGATGCTGCCGACTTACTGATTTAGTGTATGATGGTGTTTTTGAAGTGCTCCAGTGGCTTCTGTTTCTATCAGC                         <  2:1188214/97‑1
                                                                               GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     <  1:14140/100‑1
                                                                               GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     >  2:624299/1‑100
                                                                               GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     >  2:1354409/1‑100
                                                                               GTTCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                     >  2:2198547/1‑100
                                                                                 TCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                   <  1:1754674/100‑1
                                                                                 TCTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                   >  1:3909045/1‑100
                                                                                  nTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCC                   >  1:1786422/2‑99
                                                                                  CTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                  >  2:3537803/1‑100
                                                                                  CTTTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                  <  2:3626861/100‑1
                                                                                    TTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                <  2:2541617/100‑1
                                                                                    TTATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCC                <  2:1545634/100‑1
                                                                                      ATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTG              <  1:1293860/100‑1
                                                                                      ATTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT               >  1:3672278/1‑99
                                                                                       TTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT             <  2:2306021/100‑1
                                                                                       TTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT             <  2:1662432/100‑1
                                                                                       TTTTGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT             <  2:3738215/100‑1
                                                                                        cgtaTGCCGTCGGTGATGCTGCAAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT            >  2:155471/5‑100
                                                                                          TGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA          >  1:1200482/1‑100
                                                                                          TGTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCA          <  2:12202/100‑1
                                                                                           GTGCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAG         >  2:196362/1‑100
                                                                                             GCCGCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCT       >  1:622512/1‑100
                                                                                              CCGCCGGCGATACTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCATCTGTTTCTATCAGCTGTCCCTCCTGTTCAGC        >  2:2069446/1‑98
                                                                                                  CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  >  2:617450/1‑100
                                                                                                  CGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  >  1:2323720/1‑100
                                                                                                                                                                                                      
ATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1292943‑1293041
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGA  <  NC_000913/1979270‑1979172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.