Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,033 IS1 (+) +9 bp 100% intergenic (‑111/‑486) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)105 (0.740) 66/178 NT 99.0% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293033 = 1 (0.010)intergenic (‑111/‑494) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 12930411 (0.010)119 (0.840) 82/178 NT 99.1% intergenic (‑119/‑486) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 246 total aligned reads displayed.

TATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTC  >  NC_000913/1292942‑1293140
                                                                                                   |                                                                                                   
tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccgcc                                                                                                     >  1:2101855/1‑100 (MQ=255)
gctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTgccgcc                                                                                                     <  1:1995910‑M2/9‑1 (MQ=255)
 aTTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCg                                                                                                    <  1:3255756‑M1/100‑2 (MQ=255)
  ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCgg                                                                                                   >  1:1113805‑M1/1‑98 (MQ=255)
    ggggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtg                                                                                                 >  2:1977150‑M1/1‑96 (MQ=255)
     cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataa                                                                                                >  2:1800477‑M2/87‑100 (MQ=255)
     cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataa                                                                                                >  1:1470862‑M2/87‑100 (MQ=255)
      gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataaa                                                                                               <  2:877474‑M2/15‑1 (MQ=255)
      gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataaa                                                                                               <  2:829389‑M2/15‑1 (MQ=255)
      ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgat                                                                                               >  1:3033116‑M1/1‑94 (MQ=255)
       gtggtTTGTTGAGGTAATAATAGATCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgat                                                                                               <  1:3423854‑M1/99‑7 (MQ=255)
        tctcaaaatcggtggagctgcatgacaaagtcatcgggaattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataaata                                                                                             <  2:3444760‑M2/17‑1 (MQ=255)
         ggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgct                                                                                            >  1:2698133‑M1/1‑91 (MQ=255)
         ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAatat                                                                                            >  2:1282829‑M2/83‑100 (MQ=255)
         ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAatat                                                                                            >  2:3706501‑M2/83‑100 (MQ=255)
            ttgttgAAGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgcc                                                                                         <  2:1268924‑M1/100‑13 (MQ=255)
              aatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCtttt                                                                                       <  2:1701697‑M2/23‑1 (MQ=255)
               ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaac                                                                                      <  2:1744208‑M1/100‑16 (MQ=255)
                   ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttac                                                                                  >  1:1930647‑M1/1‑81 (MQ=255)
                    tggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATaaa                                                                                 <  1:1298510‑M2/29‑1 (MQ=255)
                    gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttact                                                                                 <  2:214795‑M1/100‑21 (MQ=255)
                    gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttact                                                                                 <  1:3070341‑M1/100‑21 (MQ=255)
                      gagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAAt                                                                               <  2:434121‑M2/31‑1 (MQ=255)
                       ataataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgat                                                                              >  2:3054326‑M1/1‑77 (MQ=255)
                        taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatt                                                                             <  2:1557393‑M1/100‑25 (MQ=255)
                          tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                           >  2:1669427‑M2/66‑100 (MQ=255)
                          ataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgattta                                                                           <  1:3005242‑M1/100‑27 (MQ=255)
                           taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttag                                                                          <  1:2164110‑M1/100‑28 (MQ=255)
                           gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGcc                                                                          <  1:2854685‑M2/36‑1 (MQ=255)
                            agagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatactgccaacttactgatttagt                                                                         >  2:259332‑M1/1‑72 (MQ=255)
                             gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtg                                                                        <  2:387888‑M1/100‑30 (MQ=255)
                             gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtg                                                                        >  1:2380171‑M1/1‑71 (MQ=255)
                             atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAg                                                                        >  2:237781‑M2/63‑100 (MQ=255)
                             atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAg                                                                        >  1:3588032‑M2/63‑100 (MQ=255)
                              tgacaaagtcatcgggcatgatctgaacataaaacactatcaataagttggagtcaataccTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGa                                                                       <  2:3261562‑M2/39‑1 (MQ=255)
                                ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtat                                                                     >  1:3626889‑M1/1‑68 (MQ=255)
                                acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                     <  1:788880‑M2/41‑1 (MQ=255)
                                 caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaaa                                                                    >  1:263808‑M2/59‑100 (MQ=255)
                                 cTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatg                                                                    >  1:2820475‑M1/1‑67 (MQ=255)
                                    aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatg                                                                 <  1:371596‑M1/100‑37 (MQ=255)
                                     aaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatgg                                                                >  2:1197189‑M1/1‑63 (MQ=255)
                                        atcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                             >  2:248016‑M2/52‑100 (MQ=255)
                                          cgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                           >  1:3686995‑M2/50‑100 (MQ=255)
                                          cgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                           <  1:2973449‑M2/51‑1 (MQ=255)
                                           gTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                          <  2:165893‑M1/100‑44 (MQ=255)
                                           gTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                          <  1:3120938‑M1/100‑44 (MQ=255)
                                             tgtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                        <  1:1604090‑M1/100‑46 (MQ=255)
                                              gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                       <  2:136695‑M1/100‑47 (MQ=255)
                                               tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                      >  1:1548108‑M1/1‑53 (MQ=255)
                                                gCAATAGCCAGGGATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                     <  2:3166467‑M1/100‑49 (MQ=255)
                                                 tatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGcc                                                    <  1:604956‑M2/58‑1 (MQ=255)
                                                 cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                    <  1:397244‑M1/100‑50 (MQ=255)
                                                  atctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGccc                                                   >  1:1834155‑M2/42‑100 (MQ=255)
                                                  atctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGAGGCATATAGccc                                                   >  1:3755402‑M2/42‑100 (MQ=255)
                                                  aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgacaacttactgatttagtgtatgatggtgtttttgaggtg                                                   >  2:3828669‑M1/1‑50 (MQ=255)
                                                   tctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCt                                                  >  2:2062081‑M2/41‑100 (MQ=255)
                                                    ctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTa                                                 >  2:2678021‑M2/40‑100 (MQ=255)
                                                     tgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAt                                                >  1:1128277‑M2/39‑100 (MQ=255)
                                                     tgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAt                                                >  2:1844484‑M2/39‑100 (MQ=255)
                                                     tgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAt                                                >  1:950220‑M2/39‑100 (MQ=255)
                                                       aacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                              <  2:2960867‑M2/64‑1 (MQ=255)
                                                         cataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTac                                            <  1:1960719‑M2/66‑1 (MQ=255)
                                                            aaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                         <  2:1481068‑M2/69‑1 (MQ=255)
                                                            aaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                         <  2:1318908‑M2/69‑1 (MQ=255)
                                                            aaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                         <  1:1375019‑M2/69‑1 (MQ=255)
                                                                tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                     >  2:3751619‑M1/1‑36 (MQ=255)
                                                                cactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatg                                     <  1:1256156‑M2/73‑1 (MQ=255)
                                                                cactatcaataagttggagacattaccTGTCCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACcgatt                                     <  2:3627774‑M2/73‑2 (MQ=255)
                                                                  ccatcaataagttggagtcattaccTGTGCCACCAATAAATAACTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatgat                                   >  1:2666674‑M2/26‑100 (MQ=255)
                                                                   ggAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                  >  1:2412050‑M1/1‑33 (MQ=255)
                                                                    gAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                 <  2:3870601‑M1/100‑69 (MQ=255)
                                                                      caataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                               <  2:739011‑M2/79‑1 (MQ=255)
                                                                      aTTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                               >  1:1771936‑M1/1‑30 (MQ=255)
                                                                       ttCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta                              >  1:2291490‑M1/1‑29 (MQ=255)
                                                                       aataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGCACAGACGCGGCATATATCCCTATTTACACCGATGATTTCgc                              >  2:1617326‑M2/21‑100 (MQ=255)
                                                                       aataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                              >  1:1748282‑M2/21‑100 (MQ=255)
                                                                       aataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                              <  2:2556655‑M2/80‑1 (MQ=255)
                                                                       aataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                              <  1:3187766‑M2/80‑1 (MQ=255)
                                                                       aataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                              >  1:1886428‑M2/21‑100 (MQ=255)
                                                                        tCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                             >  1:2541634‑M1/1‑28 (MQ=255)
                                                                          aagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagc                           <  2:3736615‑M2/83‑1 (MQ=255)
                                                                          aaaaTTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                           <  1:865456‑M1/100‑75 (MQ=255)
                                                                           agttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagca                          >  1:2568875‑M2/17‑100 (MQ=255)
                                                                              ttGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg                       <  1:914066‑M1/100‑79 (MQ=255)
                                                                               tGTTCTTTATTTTGTGCCGCCggtgatgctgccgacttactgatttagtgtatgatggtgtttttgaagtgctccagtggcttctgtttctatcagc                         <  2:1188214‑M1/97‑77 (MQ=255)
                                                                                gTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                     >  2:2198547‑M1/1‑20 (MQ=255)
                                                                                gTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                     >  2:624299‑M1/1‑20 (MQ=255)
                                                                                gTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                     <  1:14140‑M1/100‑81 (MQ=255)
                                                                                  tCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                   >  1:3909045‑M1/1‑18 (MQ=255)
                                                                                   cTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                  >  2:3537803‑M1/1‑17 (MQ=255)
                                                                                      tATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtactccagtggcttctgtttctatcagctgtccctcct               >  2:1539942‑M1/1‑14 (MQ=255)
                                                                                           tgtgCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca          <  2:12202‑M1/100‑92 (MQ=255)
                                                                                           tgtgCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca          >  1:1200482‑M1/1‑9 (MQ=255)
                                                                                              gccgccggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagct       <  2:2793774‑M1/100‑95 (MQ=255)
                                                                                              gccgccggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagct       >  1:622512‑M1/1‑6 (MQ=255)
                                                                                              gccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAAGTTAAAACTTcc        <  2:536804/99‑1 (MQ=255)
                                                                                               ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg      >  2:1956917/1‑100 (MQ=255)
                                                                                                 gccggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact    >  2:791517‑M1/1‑3 (MQ=255)
                                                                                                 gccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt    >  2:3125759/1‑100 (MQ=255)
                                                                                                   cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga  >  2:617450‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
TATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTC  >  NC_000913/1292942‑1293140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.