New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 377335 =NA (NA)17 (0.130) 8/164 NT NA noncoding (1/187 nt) REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 377368 = NA (NA)noncoding (34/187 nt) REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 233 total aligned reads displayed.

CCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGG  >  NC_000913/377269‑377466
                                                                                                   |                                                                                                  
tggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtagGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    >  1:615176‑M1/67‑100 (MQ=255)
tggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtagGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    >  1:2164348‑M1/67‑100 (MQ=255)
cccGTATGCCGACTTCAAAGTGCCTGATGATTTTATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    <  2:451021/100‑1 (MQ=255)
cccGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGcc                                                                                                    <  2:870612/100‑1 (MQ=255)
 ggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtagGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCt                                                                                                   >  1:3446602‑M1/66‑100 (MQ=255)
 ccGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCt                                                                                                   >  2:1863131/1‑100 (MQ=255)
     cacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataatccgtagGCCTGATGCGACCCTATGCGCGTCTTATCAGGCCTACgg                                                                                               >  1:171140‑M1/62‑100 (MQ=255)
       gCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGtt                                                                                             >  1:2513208/1‑100 (MQ=255)
           aCTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATg                                                                                         <  2:1167057/100‑1 (MQ=255)
           aCTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATg                                                                                         <  1:2065494/100‑1 (MQ=255)
            cTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATgg                                                                                        >  2:3023645/1‑100 (MQ=255)
             ttCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATggg                                                                                       <  1:3638937/100‑1 (MQ=255)
               cAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACTGTTCATGGGCg                                                                                     <  2:2066196/100‑1 (MQ=255)
                   gTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAgt                                                                                 <  2:2840807/100‑1 (MQ=255)
                   gTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAgt                                                                                 <  1:3020643/100‑1 (MQ=255)
                      ccTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTa                                                                              <  1:37880/100‑1 (MQ=255)
                      ccTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTa                                                                              >  2:638472/1‑100 (MQ=255)
                       cTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAg                                                                             >  2:112874/1‑100 (MQ=255)
                        tgatgaTTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGa                                                                            >  2:703359/1‑100 (MQ=255)
                            gatTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCgg                                                                        >  2:742812/1‑100 (MQ=255)
                             atTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGa                                                                       <  1:2312618/100‑1 (MQ=255)
                             atTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGa                                                                       >  1:427490/1‑100 (MQ=255)
                              tttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGAt                                                                      >  2:1333625/1‑100 (MQ=255)
                               ttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATa                                                                     <  2:1546350/100‑1 (MQ=255)
                               ttGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATa                                                                     <  2:3299591/100‑1 (MQ=255)
                                tGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATaa                                                                    >  1:922393/1‑100 (MQ=255)
                                tGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATaa                                                                    <  1:2835322/100‑1 (MQ=255)
                                tGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATACGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATaa                                                                    >  2:2155446/1‑100 (MQ=255)
                                 gATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAg                                                                   >  1:2408763/1‑100 (MQ=255)
                                  aTGTGGTAAATATAGATTAGTCGGGCGCAGATGCTTGATGCGACGCTATGCGCGTATGATCAGGCCTACGGTTTATGGGCGAAATGTAGACCGGATAAg                                                                   <  2:2581174/99‑1 (MQ=37)
                                    gtgGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCg                                                                <  1:510353/100‑1 (MQ=255)
                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATaa                                                                    >  1:1035960/1‑94 (MQ=255)
                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGtt                                                              >  1:3373627/1‑100 (MQ=255)
                                      ggTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGtt                                                              >  2:2479805/1‑100 (MQ=255)
                                        tAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCa                                                            >  1:1979496/1‑100 (MQ=255)
                                         aaaCATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAc                                                           >  1:1799359/1‑100 (MQ=255)
                                         aaaCATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAc                                                           >  1:3845519/1‑100 (MQ=255)
                                           aCATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgc                                                         >  2:1744955/1‑100 (MQ=255)
                                            cATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCAcgcc                                                        <  2:104201/100‑1 (MQ=255)
                                                     gTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               >  2:1718778/1‑100 (MQ=255)
                                                     gTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               >  1:106179/1‑100 (MQ=255)
                                                     gTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc                                               >  1:46185/1‑100 (MQ=255)
                                                       cGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAg                                             <  1:813964/100‑1 (MQ=255)
                                                        gTGCGCAGATGCCTGCTGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTCGACCACATAAGGCGTTCACGCCGCATCCGGCAg                                             >  2:2377370/1‑99 (MQ=17)
                                                         tGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGATTTCTGCGCGAAGTGTAGAACGGATAAGGCGTTTACGCCGCATCCGGc                                               >  2:2606255/1‑96 (MQ=17)
                                                          gcgcAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCg                                          >  1:1014682/1‑100 (MQ=255)
                                                           cgcAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt                                         >  1:162210/1‑100 (MQ=255)
                                                            gcAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTg                                        >  2:2755494/1‑100 (MQ=255)
                                                            ccgtaggcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTg                                        >  1:929123‑M2/40‑100 (MQ=255)
                                                              gtaggcctgataagacgcgcaaagcgtcgcatcaggcCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGtgct                                      >  2:1408412‑M2/38‑99 (MQ=255)
                                                               gATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTgc                                       >  2:3372499/1‑98 (MQ=255)
                                                                aggcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTgcgc                                     >  1:3822570‑M2/36‑99 (MQ=255)
                                                                aTGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGcc                                    <  2:3618797/100‑1 (MQ=255)
                                                                  gcctgataagacgcgcatagcgtcttatcaggcCTACGGTTTATGGGCGAAGTTTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCAt                                  >  2:3583977‑M2/34‑100 (MQ=255)
                                                                  gcctgataagacgcgcatagcgtcgcattaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGTCGTTCACGCCGCATCCGGCAGTCGTGCGCCa                                   >  2:914454‑M2/34‑99 (MQ=255)
                                                                  gcctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCAt                                  >  1:2398272‑M2/34‑100 (MQ=255)
                                                                   cctgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATg                                 >  1:1121917‑M2/33‑100 (MQ=255)
                                                                   CCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATg                                 <  1:824691‑M1/100‑1 (MQ=255)
                                                                     tgataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGcc                               >  1:2275105‑M2/31‑100 (MQ=255)
                                                                     TGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCGGGCAGTCGTGCGCCATGcc                               <  2:3484580‑M1/100‑1 (MQ=255)
                                                                     TGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGcc                               <  2:2965004‑M1/100‑1 (MQ=255)
                                                                      gataagacgcgcatagcgtcgcatcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCt                              >  2:2009867‑M2/30‑100 (MQ=255)
                                                                      GATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATACGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCt                              >  2:2431253‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGa                            <  1:2168557‑M1/100‑1 (MQ=255)
                                                                         gCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGa                            >  2:2004438/1‑99 (MQ=255)
                                                                          cGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATg                          >  1:445205/1‑100 (MQ=255)
                                                                          cGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATg                          >  1:1788799/1‑100 (MQ=255)
                                                                          cGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATg                          <  1:3046776/100‑1 (MQ=255)
                                                                          cGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATg                          >  2:3533900/1‑100 (MQ=255)
                                                                           gACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGAtaa                         <  1:697856/100‑3 (MQ=255)
                                                                           gACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGc                         <  2:2204705/100‑1 (MQ=255)
                                                                            aagCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATg                          <  2:781795/96‑1 (MQ=255)
                                                                            aCGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGc                         <  2:2187380/99‑1 (MQ=255)
                                                                              gCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCAGATGCGAc                      <  2:160707/100‑1 (MQ=255)
                                                                               cTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACg                     >  2:2368370/1‑100 (MQ=255)
                                                                                  tGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCtt                  >  1:1384442/1‑100 (MQ=255)
                                                                                  tGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCtt                  <  1:2017545/100‑1 (MQ=255)
                                                                                   gcgcGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCttt                 >  1:3344995/1‑100 (MQ=255)
                                                                                   gcgcGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCttt                 >  1:2350567/1‑100 (MQ=255)
                                                                                    cgcgTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTg                <  2:2319450/100‑1 (MQ=255)
                                                                                      cgTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgcg              <  1:3533926/100‑1 (MQ=255)
                                                                                      cgTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTGgcg              <  1:1292824/100‑1 (MQ=255)
                                                                                       gTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTgcg              <  2:3162132/99‑1 (MQ=255)
                                                                                        tCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGcgcg            <  1:3246103/100‑1 (MQ=255)
                                                                                        tCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGcgcg            <  1:1430076/100‑1 (MQ=255)
                                                                                          ttATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTc          <  2:2331552/100‑1 (MQ=255)
                                                                                          ttATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTc          >  2:905217/1‑100 (MQ=255)
                                                                                          ttATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTc          <  1:2826277/100‑1 (MQ=255)
                                                                                          ttATCAGGCCTACGGTTTATGGGCGAAGGGTAGACCGGAGAACGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTc          <  2:2776525/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCt         <  1:2684630/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCt         <  1:3947046/100‑1 (MQ=255)
                                                                                            atcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCtt        >  2:1535733‑M2/8‑100 (MQ=255)
                                                                                             tcaggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTa       <  1:2202714‑M2/94‑1 (MQ=255)
                                                                                               aggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCTTCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATc     <  2:2730853‑M2/96‑1 (MQ=255)
                                                                                               aggcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATc     >  1:2988812‑M2/5‑100 (MQ=255)
                                                                                                 gcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAg   >  1:1299147‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAg   >  1:1584248‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAg   >  1:3807887‑M2/3‑100 (MQ=255)
                                                                                                  ccTACGGTTTATGGGCGAAGTGTCGCCCGGATAACGCCTTCACGCCGCATCCCGCAGTCGTGCGCCATGCCTGATGCCACGCTTTGCGCGTCTTATCAgg  <  2:3876723/100‑1 (MQ=25)
                                                                                                  cCTACGGTTTATGGGCGACGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGACATGCCTGATGCGTCGCTTTGCGCGTCTAATc     >  2:1381755‑M2/2‑97 (MQ=255)
                                                                                                   |                                                                                                  
CCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGG  >  NC_000913/377269‑377466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.