| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,121,521 | Δ9 bp | coding (219‑227/1332 nt) | hslU ← | molecular chaperone and ATPase component of HslUV protease |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4121521 | 4121529 | 9 | 59 [0] | [0] 60 | hslU | molecular chaperone and ATPase component of HslUV protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4121520 | 0 (0.000) | 57 (0.670) | 48/196 | 1.0 | 100% | coding (228/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease |
| ? | NC_000913 | 4121530 = | 0 (0.000) | coding (218/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease | |||||
TTCACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4121422‑4121520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTG > NC_000913/4121530‑4121628 TTCACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCA < 1:1650755/100‑1 CACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGC > 1:1943590/1‑100 CGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTT < 1:1140726/100‑1 CGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTT > 2:278239/1‑100 nCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCA > 1:618316/2‑100 GCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCA < 2:1559137/100‑1 GCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCA < 2:1859383/100‑1 TCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACG > 1:769333/1‑100 CAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGG < 1:368284/100‑1 AGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGG < 2:403482/100‑1 AGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTGCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGG < 2:1074084/100‑1 GATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGC > 1:846319/1‑100 GATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGC > 2:1871750/1‑100 ATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCG > 1:566513/1‑100 CGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGAT > 1:1785673/1‑100 CGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGAT > 1:2143216/1‑100 GCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATT > 1:2027721/1‑100 ATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAG < 1:1388035/100‑1 GAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTAC > 2:673770/1‑100 AATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACC < 2:1329546/100‑1 TCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCG < 1:893923/99‑1 CCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGATCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGAC > 2:1419939/1‑100 CACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACA > 2:620639/1‑100 ACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACAC > 1:1370010/1‑100 CTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACC > 1:2138172/1‑100 TTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCG < 1:2003267/100‑1 TTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCG < 1:848630/100‑1 TCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGG > 1:670555/1‑100 CCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGC > 2:929272/1‑100 CGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCC < 1:929274/100‑1 GACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCG > 1:511733/1‑100 atctGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGAT < 1:622009/96‑1 CGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGAT < 2:618316/100‑1 CGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGA < 2:602894/99‑1 TAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCA > 2:1527657/1‑100 GCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATagat > 2:622009/1‑96 CCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCA > 1:1779744/1‑100 CACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGG < 1:1871757/100‑1 GTGAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTT > 1:184422/1‑100 GAATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTC > 2:1334310/1‑100 AATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCG > 2:1538581/1‑100 AATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCG < 1:1713775/100‑1 ATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGG < 2:1370007/100‑1 ATTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGACGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGG < 2:1943582/100‑1 TTTGGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGG < 1:160431/100‑1 GGTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTC > 2:1682998/1‑100 GTCGCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCA > 1:1974661/1‑100 GCTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTT > 1:892218/1‑100 CTTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTC > 2:1852422/1‑100 TTCAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCA < 1:1419942/100‑1 CAACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATG > 1:653711/1‑100 ACTTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGC > 2:553915/1‑100 TTTGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGC < 2:670554/100‑1 TGATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAG < 2:566514/100‑1 ATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCT > 2:1925187/1‑100 ATGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCT > 2:1435700/1‑100 TGAACGGCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTC > 1:1201326/1‑100 CAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTG < 1:334877/100‑1 CAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTG < 1:620639/100‑1 TTCACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4121422‑4121520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTG > NC_000913/4121530‑4121628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |