| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,121,521 | Δ9 bp | coding (219‑227/1332 nt) | hslU ← | molecular chaperone and ATPase component of HslUV protease |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4121521 | 4121529 | 9 | 59 [0] | [0] 60 | hslU | molecular chaperone and ATPase component of HslUV protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4121520 | 0 (0.000) | 57 (0.670) | 48/196 | 1.0 | 100% | coding (228/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease |
| ? | NC_000913 | 4121530 = | 0 (0.000) | coding (218/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease | |||||
GCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGA > NC_000913/4121431‑4121629 | ttcacggcggcatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggca < 1:1650755‑M2/1‑1 (MQ=255) cacggcggcatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGc > 1:1943590‑M2/98‑100 (MQ=255) cggcggcatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCtt < 1:1140726‑M2/5‑1 (MQ=255) cggcggcatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCtt > 2:278239‑M2/96‑100 (MQ=255) ncatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCa > 1:618316‑M2/91‑100 (MQ=255) gcatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCa < 2:1559137‑M2/10‑1 (MQ=255) gcatcggtcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCa < 2:1859383‑M2/10‑1 (MQ=255) tcagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGacgacg > 1:769333‑M2/84‑100 (MQ=255) cagatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACgg < 1:368284‑M2/18‑1 (MQ=255) agatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACggg < 2:403482‑M2/19‑1 (MQ=255) agatcgcgaataatagaatccacttccttaccgacgtagcccactgcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACggg < 2:1074084‑M2/19‑1 (MQ=255) gatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGc > 2:1871750‑M2/81‑100 (MQ=255) gatcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGc > 1:846319‑M2/81‑100 (MQ=255) atcgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCg > 1:566513‑M2/80‑100 (MQ=255) cgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGAt > 1:1785673‑M2/78‑100 (MQ=255) cgcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGAt > 1:2143216‑M2/78‑100 (MQ=255) gcgaataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGAtt > 1:2027721‑M2/77‑100 (MQ=255) ataatagaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAg < 1:1388035‑M2/28‑1 (MQ=255) gaatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTAc > 2:673770‑M2/67‑100 (MQ=255) aatccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTAcc < 2:1329546‑M2/35‑1 (MQ=255) tccacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCg < 1:893923‑M2/36‑1 (MQ=255) ccacttccttaccgacgtagcccacttcggtgaatttgatcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGac > 2:1419939‑M2/63‑100 (MQ=255) cacttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGaca > 2:620639‑M2/62‑100 (MQ=255) acttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGacac > 1:1370010‑M2/61‑100 (MQ=255) cttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACAcc > 1:2138172‑M2/60‑100 (MQ=255) ttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCg < 1:2003267‑M2/42‑1 (MQ=255) ttccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCg < 1:848630‑M2/42‑1 (MQ=255) tccttaccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCgg > 1:670555‑M2/58‑100 (MQ=255) ccgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGc > 2:929272‑M2/52‑100 (MQ=255) cgacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGcc < 1:929274‑M2/50‑1 (MQ=255) gacgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCg > 1:511733‑M2/50‑100 (MQ=255) cgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGat < 2:618316‑M2/53‑1 (MQ=255) cgtagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGa < 2:602894‑M2/52‑1 (MQ=255) atctgcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGat < 1:622009‑M2/53‑1 (MQ=255) tagcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGatca > 2:1527657‑M2/46‑100 (MQ=255) gcccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGgccgatagat > 2:622009‑M2/44‑96 (MQ=255) cccacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGAtcatca > 1:1779744‑M2/43‑100 (MQ=255) cacttcggtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAgg < 1:1871757‑M2/60‑1 (MQ=255) gtgaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAtttt > 1:184422‑M2/34‑100 (MQ=255) gaatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTc > 2:1334310‑M2/32‑100 (MQ=255) aatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCg < 1:1713775‑M2/70‑1 (MQ=255) aatttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCg > 2:1538581‑M2/31‑100 (MQ=255) atttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCgg < 2:1370007‑M2/71‑1 (MQ=255) atttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGACGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCgg < 2:1943582‑M2/71‑1 (MQ=255) tttggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCggg < 1:160431‑M2/72‑1 (MQ=255) ggtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTc > 2:1682998‑M2/26‑100 (MQ=255) gtcgcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCa > 1:1974661‑M2/25‑100 (MQ=255) gcttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACtt > 1:892218‑M2/22‑100 (MQ=255) cttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTc > 2:1852422‑M2/21‑100 (MQ=255) ttcaactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCa < 1:1419942‑M2/81‑1 (MQ=255) caactttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATg > 1:653711‑M2/18‑100 (MQ=255) actttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGgc > 2:553915‑M2/16‑100 (MQ=255) tttgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGgcgc < 2:670554‑M2/87‑1 (MQ=255) tgatgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAg < 2:566514‑M2/89‑1 (MQ=255) atgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGct > 2:1925187‑M2/10‑100 (MQ=255) atgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGct > 2:1435700‑M2/10‑100 (MQ=255) tgaacggcAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGctc > 1:1201326‑M2/9‑100 (MQ=255) cAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTg < 1:334877‑M2/99‑1 (MQ=255) cAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTg < 1:620639‑M2/99‑1 (MQ=255) aGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGa < 1:673771/100‑1 (MQ=255) | GCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGA > NC_000913/4121431‑4121629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |