| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,121,521 | Δ9 bp | coding (219‑227/1332 nt) | hslU ← | molecular chaperone and ATPase component of HslUV protease |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4121521 | 4121529 | 9 | 59 [0] | [0] 60 | hslU | molecular chaperone and ATPase component of HslUV protease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4121520 | 0 (0.000) | 57 (0.670) | 48/196 | 1.0 | 100% | coding (228/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease |
| ? | NC_000913 | 4121530 = | 0 (0.000) | coding (218/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease | |||||
TTCACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGC > NC_000913/4121422‑4121619 | ttCACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCa < 1:1650755‑M1/100‑2 (MQ=255) cACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagc > 1:1943590‑M1/1‑97 (MQ=255) cggcggCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagctt < 1:1140726‑M1/100‑6 (MQ=255) cggcggCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagctt > 2:278239‑M1/1‑95 (MQ=255) ncaTCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagcca > 1:618316‑M1/2‑90 (MQ=255) gcATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagcca < 2:1559137‑M1/100‑11 (MQ=255) gcATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagcca < 2:1859383‑M1/100‑11 (MQ=255) tCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacg > 1:769333‑M1/1‑83 (MQ=255) cAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgg < 1:368284‑M1/100‑19 (MQ=255) aGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacggg < 2:403482‑M1/100‑20 (MQ=255) aGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTGCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacggg < 2:1074084‑M1/100‑20 (MQ=255) gATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggc > 1:846319‑M1/1‑80 (MQ=255) gATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggc > 2:1871750‑M1/1‑80 (MQ=255) aTCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcg > 1:566513‑M1/1‑79 (MQ=255) cgcgAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgat > 1:1785673‑M1/1‑77 (MQ=255) cgcgAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgat > 1:2143216‑M1/1‑77 (MQ=255) gcgAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatt > 1:2027721‑M1/1‑76 (MQ=255) ataataGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcag < 1:1388035‑M1/100‑29 (MQ=255) gAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttac > 2:673770‑M1/1‑66 (MQ=255) aaTCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttacc < 2:1329546‑M1/100‑36 (MQ=255) tCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccg < 1:893923‑M1/99‑37 (MQ=255) ccACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGATCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgac > 2:1419939‑M1/1‑62 (MQ=255) cACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgaca > 2:620639‑M1/1‑61 (MQ=255) aCTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacac > 1:1370010‑M1/1‑60 (MQ=255) cTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacacc > 1:2138172‑M1/1‑59 (MQ=255) ttCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccg < 1:2003267‑M1/100‑43 (MQ=255) ttCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccg < 1:848630‑M1/100‑43 (MQ=255) tCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccgg > 1:670555‑M1/1‑57 (MQ=255) ccGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggc > 2:929272‑M1/1‑51 (MQ=255) cGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggcc < 1:929274‑M1/100‑51 (MQ=255) gACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccg > 1:511733‑M1/1‑49 (MQ=255) cGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgat < 2:618316‑M1/100‑54 (MQ=255) cGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccga < 2:602894‑M1/99‑53 (MQ=255) atctgcccaCTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgat < 1:622009‑M1/96‑54 (MQ=255) tAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatca > 2:1527657‑M1/1‑45 (MQ=255) gCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatagat > 2:622009‑M1/1‑43 (MQ=255) cccACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatca > 1:1779744‑M1/1‑42 (MQ=255) cACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcagg < 1:1871757‑M1/100‑61 (MQ=255) gTGAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttt > 1:184422‑M1/1‑33 (MQ=255) gAATTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttc > 2:1334310‑M1/1‑31 (MQ=255) aaTTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcg > 2:1538581‑M1/1‑30 (MQ=255) aaTTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcg < 1:1713775‑M1/100‑71 (MQ=255) aTTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcgg < 2:1370007‑M1/100‑72 (MQ=255) aTTTGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacggacgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcgg < 2:1943582‑M1/100‑72 (MQ=255) tttGGTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggg < 1:160431‑M1/100‑73 (MQ=255) ggTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtc > 2:1682998‑M1/1‑25 (MQ=255) gTCGCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtca > 1:1974661‑M1/1‑24 (MQ=255) gCTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcactt > 1:892218‑M1/1‑21 (MQ=255) cTTCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttc > 2:1852422‑M1/1‑20 (MQ=255) ttCAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttca < 1:1419942‑M1/100‑82 (MQ=255) cAACTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatg > 1:653711‑M1/1‑17 (MQ=255) aCTTTGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggc > 2:553915‑M1/1‑15 (MQ=255) tttGATGAACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgc < 2:670554‑M1/100‑88 (MQ=255) tgatgaACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgcag < 2:566514‑M1/100‑90 (MQ=255) atgaACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgcagct > 2:1925187‑M1/1‑9 (MQ=255) atgaACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgcagct > 2:1435700‑M1/1‑9 (MQ=255) tgaACGGCagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgcagctc > 1:1201326‑M1/1‑8 (MQ=255) cagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgcagctcttcgttg < 1:334877‑M1/100‑100 (MQ=255) cagcttagccagacgacgggcgatttcagttttaccgacaccggtcgggccgatcatcaggatatttttcggggtcacttcatggcgcagctcttcgttg < 1:620639‑M1/100‑100 (MQ=255) | TTCACGGCGGCATCGGTCAGATCGCGAATAATAGAATCCACTTCCTTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGC > NC_000913/4121422‑4121619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |