New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3299608158 (1.000)34 (0.240) 11/158 NT 18.7% coding (308/444 nt) yhbP UPF0306 family protein
?NC_000913 = 3299630 156 (1.110)coding (286/444 nt) yhbP UPF0306 family protein

Only 100 of 287 total aligned reads displayed.

ATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCT  >  NC_000913/3299509‑3299707
                                                                                                   |                                                                                                   
aTTTTTTTACCAAAGCCCGGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGAC                                                                                                     <  2:3342115‑M1/100‑1 (MQ=255)
aTTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGAC                                                                                                     >  1:2238635‑M1/1‑100 (MQ=255)
aTTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGAC                                                                                                     <  1:3134175‑M1/100‑1 (MQ=255)
 tttttttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGcgacg                                                                                                    <  1:1951043/100‑1 (MQ=255)
   cgatctccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAt                                                                                                  <  1:4372863/94‑1 (MQ=255)
      ttACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGt                                                                                               >  1:3911555/1‑100 (MQ=255)
         ccAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGAtagatcg                                                                                            >  2:4372894/1‑94 (MQ=255)
         caaaaGCGCAGCGTGTTGTAGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACGGCATTCTGGCAACCGGAAAGCGACGACTGCACg                                                                                            >  1:2137438/3‑100 (MQ=255)
           aaaGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGcc                                                                                          <  1:150026/100‑1 (MQ=255)
           aaaGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGcc                                                                                          >  1:1113364/1‑100 (MQ=255)
                  aGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtac                                                                                   >  2:2791659‑M1/1‑82 (MQ=255)
                  aGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTgcgcg                                                                                   <  2:1603271/100‑1 (MQ=255)
                  aGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTgcgcg                                                                                   <  2:856871/100‑1 (MQ=255)
                  aGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTgcgcg                                                                                   >  1:2501156/1‑100 (MQ=255)
                   gCGTGTTGTCGGGGAATTTGATTTCATCGAGCCGGAGTTCTCACACCGGGGACGACAGCATTCTGGCAACTGGAAAGCGACGAGTGTACGCATTgcgcg                                                                                   >  1:1682851/1‑99 (MQ=255)
                     gtgtTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACGCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGa                                                                                <  1:60520/100‑1 (MQ=255)
                     gtgtTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGa                                                                                <  2:3695444/100‑1 (MQ=255)
                     gtgtTGTCGGTGAATTTGATTTCAGCGAGCCGGAGTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGcgcgcgn                                                                                <  2:1886715/100‑2 (MQ=255)
                         tgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtc                                                                            >  1:3912257‑M2/1‑97 (MQ=255)
                          gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                           <  2:69388‑M2/100‑5 (MQ=255)
                          gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                           >  2:3188368‑M2/1‑96 (MQ=255)
                          gtCGGTGAATTTGATTTCATCGAGCCGGATTTACCACACCGGGGCCGACAGCATTCTCGGAACCGGCAAGAGCCGATTGTCCGCCTTGCGCGCGAGg                                                                              <  1:4134914‑M2/97‑2 (MQ=255)
                           tCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgc                                                                          >  2:1305383‑M2/1‑95 (MQ=255)
                            cGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgct                                                                         <  2:3854996‑M2/100‑7 (MQ=255)
                             ggTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctt                                                                        >  1:834704‑M2/1‑93 (MQ=255)
                             ggTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctt                                                                        >  1:3715683‑M2/1‑93 (MQ=255)
                               tGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttc                                                                      <  1:2930741‑M1/100‑32 (MQ=255)
                               tGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttc                                                                      <  2:2471948‑M1/100‑32 (MQ=255)
                                tcttttgatTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                                     <  2:1982376‑M1/97‑33 (MQ=255)
                                gagtttGATTTCAGCGACGCGGATTGCCGAAACCGGTGCCGACTGCATTCTGGCAACCGGAAAGCGGCCATTGTACGCCTTGCGCGCGAGGTCGCGTTcc                                                                     <  1:1505848/97‑1 (MQ=255)
                                gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGTAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                                     <  1:184322‑M1/100‑33 (MQ=255)
                                gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                                     <  2:4197861‑M1/100‑33 (MQ=255)
                                gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttcc                                                                     <  2:2406616‑M1/100‑33 (MQ=255)
                                 aaTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccg                                                                    <  1:3709906‑M1/100‑34 (MQ=255)
                                 aaTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccg                                                                    <  1:1601901‑M1/100‑34 (MQ=255)
                                  aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccgg                                                                   <  1:28579‑M1/100‑35 (MQ=255)
                                  aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccgg                                                                   <  1:2791643‑M1/100‑35 (MQ=255)
                                  aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGGCGCTTTCCt                                                                    >  2:3637116/1‑99 (MQ=255)
                                   tctGATTTCATCGAGCCGGATTTCCCACACCAGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCa                                                                  >  2:2962067/3‑100 (MQ=255)
                                     tGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttg                                                                <  2:2146006‑M1/100‑38 (MQ=255)
                                     tGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggt                                                                  <  1:383504‑M1/98‑36 (MQ=255)
                                     tGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCCGCACGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCAcc                                                                >  1:456298/1‑100 (MQ=255)
                                      gATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgc                                                               <  1:821473‑M1/100‑39 (MQ=255)
                                      gATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCt                                                               >  1:3281511/1‑100 (MQ=255)
                                       aTTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCtt                                                              >  1:2085189/1‑100 (MQ=255)
                                        tttCATCGAGCCGGATTTCCCACCCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGCTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTc                                                             <  1:3007234/100‑1 (MQ=255)
                                         ttCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTcc                                                            <  2:1496908/100‑1 (MQ=255)
                                          tCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCa                                                           >  1:2918406/1‑100 (MQ=255)
                                          tCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCa                                                           >  2:2029660/1‑100 (MQ=255)
                                              cGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCt                                                       >  2:3065898/1‑100 (MQ=255)
                                                 gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                    >  2:2731290/1‑100 (MQ=255)
                                                 gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                    >  2:456530/1‑100 (MQ=255)
                                                     gATGTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAtc                                                <  2:3744317/100‑1 (MQ=255)
                                                       tttCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAtctc                                              <  1:3868191/100‑1 (MQ=255)
                                                        ttCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCa                                             >  2:4064871/1‑100 (MQ=255)
                                                         tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACTATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                            <  1:4079236/100‑1 (MQ=255)
                                                         tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                            >  1:1002859/1‑100 (MQ=255)
                                                         tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                            >  2:3220342/1‑100 (MQ=255)
                                                          cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                           >  2:2360581/1‑100 (MQ=255)
                                                             acacCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCttt                                        <  1:697929/100‑1 (MQ=255)
                                                              cacCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTa                                       >  2:3501680/1‑100 (MQ=255)
                                                               acCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTa                                       >  1:3472387/1‑99 (MQ=255)
                                                                 cGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAAc                                    <  2:3797094/100‑1 (MQ=255)
                                                                   gggCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTg                                  <  2:3721599/100‑1 (MQ=255)
                                                                    ggCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGc                                 >  1:405022/1‑100 (MQ=255)
                                                                     gCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGca                                <  2:2501168/100‑1 (MQ=255)
                                                                       cGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcaca                              <  1:1172812/100‑1 (MQ=255)
                                                                       agACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcaca                              >  2:2167932/2‑100 (MQ=255)
                                                                            gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                         >  2:2783779/1‑100 (MQ=255)
                                                                            gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                         >  2:816151/1‑100 (MQ=255)
                                                                             cATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGa                        >  2:925511/1‑100 (MQ=255)
                                                                                  tGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaa                   <  2:494761‑M2/100‑61 (MQ=255)
                                                                                  tGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTaa                   <  2:3109873/100‑1 (MQ=255)
                                                                                     cAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCAACTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGc                >  1:1371080/1‑100 (MQ=255)
                                                                                      aaCCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaa               <  1:3100220‑M2/100‑65 (MQ=255)
                                                                                       tctggaaaGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaa              >  1:1982368‑M2/4‑35 (MQ=255)
                                                                                       aCCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTa              >  2:1565944/1‑100 (MQ=255)
                                                                                        ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaat             <  2:1265261‑M2/100‑67 (MQ=255)
                                                                                        ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccgactcgatgaaatcaa               <  1:2577867‑M2/98‑65 (MQ=255)
                                                                                         cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt            <  2:3140675‑M2/100‑68 (MQ=255)
                                                                                         cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt            <  1:1195676‑M2/100‑68 (MQ=255)
                                                                                         cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt            <  2:3885234‑M2/100‑68 (MQ=255)
                                                                                          ggAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc           >  1:3532652‑M1/1‑10 (MQ=255)
                                                                                          ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagcatgctgtcggccccggtgtgggacatccggctcgatcacatcaca              <  1:1447789‑M2/97‑66 (MQ=255)
                                                                                          ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc           <  2:3842790‑M2/100‑69 (MQ=255)
                                                                                          ggAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCg           >  2:4003652/1‑100 (MQ=255)
                                                                                           gAAAGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattca          <  2:4166707‑M1/100‑92 (MQ=255)
                                                                                           gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattca          <  1:2933349‑M2/100‑70 (MQ=255)
                                                                                           gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccgcctccatgaaatcaaa              <  1:1252336‑M2/96‑66 (MQ=255)
                                                                                             aaGCGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcacc        <  2:2700692‑M1/100‑94 (MQ=255)
                                                                                              aGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGtttt       >  2:1773058/1‑100 (MQ=255)
                                                                                               gCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTc      <  1:3362958/100‑1 (MQ=255)
                                                                                                cgacgaTTGTACGCCTTTCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACTGTTTTCg     <  1:2299972/100‑1 (MQ=255)
                                                                                                cGACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgac     <  1:1050021‑M1/100‑97 (MQ=255)
                                                                                                 gACctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgaca    <  1:3650815‑M1/100‑98 (MQ=255)
                                                                                                  acgaTTGTACGCCTTGCGCGCGAGGTCGCTTTTCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGc   <  1:636180/100‑1 (MQ=255)
                                                                                                  acgaTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGc   <  2:1193703/100‑1 (MQ=255)
                                                                                                  acgaTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGc   <  2:1035743/100‑1 (MQ=255)
                                                                                                  aCctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgacaa   >  2:47764‑M1/1‑2 (MQ=255)
                                                                                                   cctcgcgcgcaaggcgtacaatcgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgacaac  <  2:2419792‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCT  >  NC_000913/3299509‑3299707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.