New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3299608158 (1.000)34 (0.240) 11/158 NT 18.7% coding (308/444 nt) yhbP UPF0306 family protein
?NC_000913 = 3299630 156 (1.110)coding (286/444 nt) yhbP UPF0306 family protein

Only 100 of 235 total aligned reads displayed.

TGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAAC  >  NC_000913/3299531‑3299729
                                                                                                   |                                                                                                   
  ttgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgt                                                                                                   >  2:3713751‑M2/1‑98 (MQ=255)
   tgtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtc                                                                                                  >  1:3912257‑M2/1‑97 (MQ=255)
    gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                                                 <  1:1050021‑M2/100‑5 (MQ=255)
    gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                                                 <  1:2244060‑M2/100‑5 (MQ=255)
    gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                                                 >  2:3188368‑M2/1‑96 (MQ=255)
    gtCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcg                                                                                                 <  2:69388‑M2/100‑5 (MQ=255)
    gtCGGTGAATTTGATTTCATCGAGCCGGATTTACCACACCGGGGCCGACAGCATTCTCGGAACCGGCAAGAGCCGATTGTCCGCCTTGCGCGCGAGg                                                                                                    <  1:4134914‑M2/97‑2 (MQ=255)
         tGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttc                                                                                            <  2:4166707‑M2/100‑10 (MQ=255)
          gagtttGATTTCAGCGACGCGGATTGCCGAAACCGGTGCCGACTGCATTCTGGCAACCGGAAAGCGGCCATTGTACGCCTTGCGCGCGAGGTCGCGTTcc                                                                                           <  1:1505848/97‑1 (MQ=255)
          gAATTTGTTGTCATCGAGCCGGTTCTCCCGAACCGGGGCCGACAGCATGCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGATGTCGCTTTcc                                                                                           <  1:3723899/100‑1 (MQ=255)
          gAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttcc                                                                                           >  1:3532652‑M2/1‑90 (MQ=255)
            aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                                                         <  2:3889805/100‑1 (MQ=255)
            aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTc                                                                                         <  1:2466287/100‑1 (MQ=255)
            aTTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGGCGCTTTCCt                                                                                          >  2:3637116/1‑99 (MQ=255)
              ttGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCAc                                                                                       >  2:3868216/1‑100 (MQ=255)
               tGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCAcc                                                                                      <  1:1971497/100‑1 (MQ=255)
               tGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCCGCACGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCAcc                                                                                      >  1:456298/1‑100 (MQ=255)
                 aTTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCtt                                                                                    >  2:86826/1‑100 (MQ=255)
                 aTTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCtt                                                                                    >  1:2085189/1‑100 (MQ=255)
                  tttCATCGAGCCGGATTTCCCACCCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGCTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTc                                                                                   <  1:3007234/100‑1 (MQ=255)
                   ttCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTcc                                                                                  <  2:1496908/100‑1 (MQ=255)
                    tCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCa                                                                                 >  2:2029660/1‑100 (MQ=255)
                     cATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAg                                                                                >  1:162103/1‑100 (MQ=255)
                      aTCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGc                                                                               >  2:2554291/1‑100 (MQ=255)
                      aTCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGc                                                                               <  2:4233721/100‑1 (MQ=255)
                       tCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGcc                                                                              <  1:3854971/100‑1 (MQ=255)
                       tCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGcc                                                                              <  1:1496472/100‑1 (MQ=255)
                        cGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCt                                                                             >  1:3143465/1‑100 (MQ=255)
                        cGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCt                                                                             >  2:3065898/1‑100 (MQ=255)
                        cGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCt                                                                             <  2:2262587/100‑1 (MQ=255)
                         gAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTg                                                                            >  2:188962/1‑100 (MQ=255)
                          aGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGc                                                                           >  1:3691810/1‑100 (MQ=255)
                           gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                                          <  2:1803389/100‑1 (MQ=255)
                           gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                                          >  2:231730/1‑100 (MQ=255)
                           gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                                          >  2:456530/1‑100 (MQ=255)
                           gCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCg                                                                          >  1:2179153/1‑100 (MQ=255)
                             cGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                                                        <  1:946146/100‑1 (MQ=255)
                             cGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                                                        <  1:2842118/100‑1 (MQ=255)
                             cGGATGTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAGAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGa                                                                        <  1:599234/100‑1 (MQ=255)
                              ggATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAt                                                                       >  2:2479357/1‑100 (MQ=255)
                              ggATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAt                                                                       >  2:128094/1‑100 (MQ=255)
                               gATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAtc                                                                      <  2:3504919/100‑1 (MQ=255)
                               gATGTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGAtc                                                                      <  2:3744317/100‑1 (MQ=255)
                                  ttCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCa                                                                   <  2:3004984/100‑1 (MQ=255)
                                  ttCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCa                                                                   >  2:4064871/1‑100 (MQ=255)
                                   tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACTATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                                                  <  1:4079236/100‑1 (MQ=255)
                                   tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                                                  >  2:3212370/1‑100 (MQ=255)
                                   tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                                                  >  2:3353659/1‑100 (MQ=255)
                                   tCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAc                                                                  >  1:1002859/1‑100 (MQ=255)
                                    cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                                                 >  2:3307358/1‑100 (MQ=255)
                                    cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                                                 >  2:840258/1‑100 (MQ=255)
                                    cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                                                 >  2:2360581/1‑100 (MQ=255)
                                    cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc                                                                 <  2:3725304/100‑1 (MQ=255)
                                      cacaCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCtt                                                               <  1:1118385/100‑1 (MQ=255)
                                      cacaCCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCtt                                                               <  1:2979940/100‑1 (MQ=255)
                                       acacCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCttt                                                              <  1:697929/100‑1 (MQ=255)
                                         acCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTa                                                             >  1:3472387/1‑99 (MQ=255)
                                           cGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTaaa                                                           <  1:3334447/99‑1 (MQ=255)
                                           cGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAAc                                                          <  2:2704218/100‑1 (MQ=255)
                                              ggCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGc                                                       >  1:3301392/1‑100 (MQ=255)
                                                 cGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcaca                                                    <  1:1172812/100‑1 (MQ=255)
                                                 cGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcaca                                                    >  2:1405472/1‑100 (MQ=255)
                                                 agACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcaca                                                    >  2:2167932/2‑100 (MQ=255)
                                                      gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACcgcg                                               >  2:2783779/1‑100 (MQ=255)
                                                       cATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGCTCTCACCTTTAAACTGCACACCGCGa                                              >  1:3955035/1‑100 (MQ=255)
                                                            tGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaa                                         <  2:494761‑M2/100‑61 (MQ=255)
                                                            tGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTaa                                         >  2:2437979/1‑100 (MQ=255)
                                                            tGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCCGCGGATCTTACCTTTAAACTGCACACCGCGAATTaa                                         <  2:3109872/100‑1 (MQ=255)
                                                              gCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatc                                       <  1:821473‑M2/100‑63 (MQ=255)
                                                              gCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCCCACCGCGAATTACCg                                       <  1:3644278/100‑1 (MQ=255)
                                                               cAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCAACTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGc                                      >  1:1371080/1‑100 (MQ=255)
                                                                aaCCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaa                                     <  1:3100220‑M2/100‑65 (MQ=255)
                                                                 aCCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTa                                    >  2:1565944/1‑100 (MQ=255)
                                                                  ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaat                                   <  1:28579‑M2/100‑67 (MQ=255)
                                                                  ccGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccgactcgatgaaatcaa                                     <  1:2577867‑M2/98‑65 (MQ=255)
                                                                   cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt                                  <  2:3140675‑M2/100‑68 (MQ=255)
                                                                   cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt                                  <  1:1195676‑M2/100‑68 (MQ=255)
                                                                   cGGAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaatt                                  <  1:1601901‑M2/100‑68 (MQ=255)
                                                                    ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagcatgctgtcggccccggtgtgggacatccggctcgatcacatcaca                                    <  1:1447789‑M2/97‑66 (MQ=255)
                                                                    ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc                                 <  2:2406616‑M2/100‑69 (MQ=255)
                                                                    ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc                                 <  2:3842790‑M2/100‑69 (MQ=255)
                                                                    ggAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttacggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattc                                 <  1:184322‑M2/100‑69 (MQ=255)
                                                                    ggAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCg                                 >  2:4003652/1‑100 (MQ=255)
                                                                     gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattca                                <  1:2930741‑M2/100‑70 (MQ=255)
                                                                     gAAAGCGACGATTGTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccgcctccatgaaatcaaa                                    <  1:1252336‑M2/96‑66 (MQ=255)
                                                                      aaaGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGt                                >  1:2780672/1‑99 (MQ=255)
                                                                        aGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGtttt                             >  2:1650411/1‑100 (MQ=255)
                                                                            acgaTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGc                         <  2:1193703/100‑1 (MQ=255)
                                                                              gaTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTg                       <  2:628426/100‑1 (MQ=255)
                                                                               aTTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTCCCAGCCTGCGGATCTCACCTTTAATCTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGa                      <  2:1668866/100‑1 (MQ=255)
                                                                                ttGTACGCCTTGCGCGCGAGCTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTg                       <  1:657447/98‑1 (MQ=255)
                                                                                  gTACGCCTTGCGCGCGAGgtcgctttccggttgccagaatgctgtcggccccggtgtgggaaatccggctcgatgaaatcaaattcaccgacaacacgct                   >  2:2791659‑M2/1‑18 (MQ=255)
                                                                                     cGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGttt                >  1:461343/1‑100 (MQ=255)
                                                                                      gCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTa               <  2:1108557/100‑1 (MQ=255)
                                                                                        cTTGCGCGCGCGGTCGCTTCCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATGAACGCTACCGTTTTCGGCTGACCGTTTAcc             <  1:3879188/100‑1 (MQ=255)
                                                                                            cgcgcgAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCCCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTc         >  2:4322071/1‑100 (MQ=255)
                                                                                             gcgcgAGGTCGCTTTCCTCACCTTCCAGCTTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTcc        <  1:323192/100‑1 (MQ=255)
                                                                                              cgcgAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGTCTGACCGTTTCCCGTTc         >  1:423102/1‑98 (MQ=255)
                                                                                                   ggTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAAc  <  1:1773052/100‑1 (MQ=255)
                                                                                                   ggTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAAc  <  2:3658888/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAGGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAAC  >  NC_000913/3299531‑3299729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.