New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3819519155 (0.980)27 (0.190) 12/160 NT 15.2% coding (1652/1683 nt) ligB DNA ligase, NAD(+)‑dependent
?NC_000913 = 3819527 163 (1.150)coding (1644/1683 nt) ligB DNA ligase, NAD(+)‑dependent

Only 100 of 256 total aligned reads displayed.

TTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT  >  NC_000913/3819421‑3819618
                                                                                                  |                                                                                                   
ntGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGcagc                                                                                                    >  1:1020367/2‑100 (MQ=255)
 tGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGcagcc                                                                                                   <  2:923654/100‑1 (MQ=255)
   cccGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGCGcagccag                                                                                                 >  1:2938925/1‑100 (MQ=255)
     cGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCagccagcc                                                                                               >  1:4175485/1‑100 (MQ=255)
      gCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAgccagcca                                                                                              <  2:259801/100‑1 (MQ=255)
             ggCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgccc                                                                                       <  1:1542200‑M1/100‑15 (MQ=255)
              gcgcTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgccca                                                                                      >  2:2512621‑M2/1‑93 (MQ=255)
                gcTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagc                                                                                    <  2:3389031‑M1/100‑18 (MQ=255)
                gcTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagc                                                                                    <  1:2059632‑M1/100‑18 (MQ=255)
                 cTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagca                                                                                   >  2:1398092‑M1/1‑82 (MQ=255)
                 cTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagca                                                                                   <  1:1398087‑M1/100‑19 (MQ=255)
                  tACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagcag                                                                                  <  2:1641840‑M1/100‑20 (MQ=255)
                  tACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagcag                                                                                  <  2:2046264‑M1/100‑20 (MQ=255)
                  tACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGctt                                                                                  >  2:3814090/1‑100 (MQ=255)
                     gCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagcagatc                                                                               <  1:1046095‑M1/100‑23 (MQ=255)
                     gCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGcttctt                                                                               >  2:3227928/1‑100 (MQ=255)
                      ccTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTg                                                                              <  2:2895586/100‑1 (MQ=255)
                       cTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagcagatcac                                                                             <  2:1584643‑M1/100‑25 (MQ=255)
                         tAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGAtt                                                                           <  2:537547/100‑1 (MQ=255)
                         tAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCAGCTGGGCAGttggctggctgcccagcagatcacag                                                                           <  2:3446116‑M1/100‑27 (MQ=255)
                          aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagcagatcacagg                                                                          <  2:3672275‑M1/100‑28 (MQ=255)
                          aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGttggctggctgcccagcagatcacagg                                                                          <  2:52213‑M1/100‑28 (MQ=255)
                           aGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTg                                                                         >  2:4290075/1‑100 (MQ=255)
                            gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgc                                                                        >  2:350652/1‑100 (MQ=255)
                             cTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcg                                                                       >  2:655696/1‑100 (MQ=255)
                              tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcgc                                                                      <  2:760154/100‑1 (MQ=255)
                              tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcgc                                                                      >  1:3380033/1‑100 (MQ=255)
                                     aCCGGTCTTTTACTACAGCCACGAAGGACTCTAAGGTTCAAAACCTGTGATCTGCTGGGCAGTTGGCTGGctgcccagcagatcacaggttttgaacc                                                                 >  1:1911629‑M2/1‑70 (MQ=255)
                                     aCCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttcc                                                               <  2:1788807/100‑1 (MQ=255)
                                      ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttcct                                                              >  2:1210367/1‑100 (MQ=255)
                                      ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttcct                                                              >  2:105086/1‑100 (MQ=255)
                                           cTTTTACTACAGCCACGAAGGACACTAGGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAt                                                         >  1:3801427/1‑100 (MQ=255)
                                           cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCan                                                         <  2:2766989/100‑2 (MQ=255)
                                           cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAt                                                         <  2:2647315/100‑1 (MQ=255)
                                             tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTc                                                       >  2:3432771/1‑100 (MQ=255)
                                             tttACTACAGCCACGAAGAACACTAAAATTCAAAACCTATGATCTGCTAGGAAAACAACCAAATAAACAGCTTTTTGAATTGCGAATATTCCTTACAt                                                         >  1:2373528/1‑98 (MQ=255)
                                                 ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATa                                                   >  2:2943313/1‑100 (MQ=255)
                                                   acAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc                                                 >  2:2164873/1‑100 (MQ=255)
                                                    cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCCGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                >  1:1281027/1‑100 (MQ=255)
                                                    cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                <  2:4250051/100‑1 (MQ=255)
                                                    cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                <  2:3685191/100‑1 (MQ=255)
                                                      gCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTg                                              >  2:2327970/1‑100 (MQ=255)
                                                          cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTg                                          >  1:1838133/1‑100 (MQ=255)
                                                          cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTg                                          >  2:4071096/1‑100 (MQ=255)
                                                          cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCGTCCATTCAATAACCTGTCTg                                          <  1:4143554/100‑1 (MQ=255)
                                                           gAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg                                         >  2:1601323/1‑100 (MQ=255)
                                                             aGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcg                                       <  2:3581733/100‑1 (MQ=255)
                                                               gACACTAAGGTTCAAAGCCTGTGATCTGCGGGGCAGCCAGGCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGcgcg                                     <  1:4360022/100‑1 (MQ=255)
                                                                 cacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc                                   >  2:1007287/1‑100 (MQ=255)
                                                                   cTAAGGTTCTAAACCTTTGATCTGCTGGGTGGCCAGCCAACTGCCCCGCTTCTTGATTTGCGCATTTTCCTTCCAATCCATTCCGTGTCGGGCGCGTcc                                  <  1:612944/99‑1 (MQ=255)
                                                                   cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTccc                                 >  1:2625705/1‑100 (MQ=255)
                                                                   cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTccc                                 >  1:1385686/1‑100 (MQ=255)
                                                                    tAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATACAAGAACCTGTCTGGCGCGTCCCg                                >  1:1716591/1‑100 (MQ=255)
                                                                    tAAGGGGCAAAACGGGTGATCGGCTGGGCAGCAAGCCAACTGTCCTGCTGCTGGAGTTGCGCATTTTCACTCCGTCCAGTAGCCTGTCTGGCGCGTgcc                                 <  1:4032634/99‑1 (MQ=255)
                                                                     aaGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGa                               >  2:2485257/1‑100 (MQ=255)
                                                                      acgTTCCAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGAt                              <  1:3241428/98‑1 (MQ=255)
                                                                       ggTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc                             >  1:4389899/1‑100 (MQ=255)
                                                                        gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcn                            <  1:2683222/100‑2 (MQ=255)
                                                                        gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcc                            >  2:1847371/1‑100 (MQ=255)
                                                                         ttCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCa                           >  1:1201909/1‑100 (MQ=255)
                                                                           cAAAACCTGTGATCTGCTGGGCAGCCAGCCCACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt                         >  1:3726432/1‑100 (MQ=255)
                                                                            aaaaCCTGTGATCTGCTGGGCAGccagccaactgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatccca                        >  1:3189174‑M1/1‑23 (MQ=255)
                                                                            aaaaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg                          <  1:3539189/98‑1 (MQ=255)
                                                                             aaaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcc                       >  2:1402824/1‑100 (MQ=255)
                                                                             aaaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATCTTCCAACCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcc                       <  1:3958154/100‑1 (MQ=255)
                                                                              aaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTccc                      >  2:4022610/1‑100 (MQ=255)
                                                                                ccTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcccc                     <  1:2912309/99‑1 (MQ=255)
                                                                                ccTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCg                    >  2:1309740/1‑100 (MQ=255)
                                                                                ccTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCg                    <  1:52472/100‑1 (MQ=255)
                                                                                  tgtgATCTGCTGGGCAGCTAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGc                  <  1:432498/100‑1 (MQ=255)
                                                                                  tgtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGc                  <  1:1165400/100‑1 (MQ=255)
                                                                                  tgtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGc                  <  2:2447415/100‑1 (MQ=255)
                                                                                  tgtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCGTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCgg                   <  1:861655/99‑1 (MQ=255)
                                                                                   gtgATCTGCTGGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaa                  <  1:1579996‑M2/99‑76 (MQ=255)
                                                                                     gATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc               >  2:2113414/1‑100 (MQ=255)
                                                                                     gATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc               >  2:3911983/1‑100 (MQ=255)
                                                                                       tCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct              <  1:1549976/99‑1 (MQ=255)
                                                                                        ctgctgGGCAGCCAGCCAActgcccagcagatcaccggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgt             <  1:1029131‑M2/99‑81 (MQ=255)
                                                                                        ctgctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgta            <  2:78211‑M2/100‑82 (MQ=255)
                                                                                        ctgctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgta            <  2:3329207‑M2/100‑82 (MQ=255)
                                                                                        ctgctgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGTCGCGTCCCGATCCAGTCCCCGGCAgctgc            >  2:165284/1‑100 (MQ=255)
                                                                                        cagctgggCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgta            <  2:2966364‑M2/98‑82 (MQ=255)
                                                                                          gctgGGCCGCCAGCCAACTACCCAGCTTCTTGATTTGCGCATTGTCCTTCCATTCAAAAAGCTGTCTTGCGCGTCCCGATCCAGTCCCCGGCAGctgctg          >  1:3090806/1‑100 (MQ=255)
                                                                                          gctgGGCAGttggctggctgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagc          <  1:258746‑M1/100‑92 (MQ=255)
                                                                                          gctgGGCAGttggctggctgcccagcagatcaaaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagc          >  2:1836159‑M1/1‑9 (MQ=255)
                                                                                          gctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagc          <  1:319939‑M2/100‑84 (MQ=255)
                                                                                          gctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcctaaggcgcagc          <  1:1574885‑M2/100‑84 (MQ=255)
                                                                                          gctgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGctgctg          >  2:4344538/1‑100 (MQ=255)
                                                                                          gctgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGctgctg          >  1:676424/1‑100 (MQ=255)
                                                                                              ggCAGttggctggctgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagcgcca      >  2:3944528‑M1/1‑5 (MQ=255)
                                                                                               gCAGttgtctggctgcccagcagagtacaggttttggaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagctttaggcgtagcgcca      <  1:1704463‑M1/99‑96 (MQ=255)
                                                                                               gCAGttggctggctgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagcgccag     >  2:4343725‑M1/1‑4 (MQ=255)
                                                                                               gCAGttggctggctgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagcgccag     <  2:4375095‑M1/100‑97 (MQ=255)
                                                                                               gCAGttggctggctgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagcgccag     <  2:499948‑M1/100‑97 (MQ=255)
                                                                                               gCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa     <  1:279583/100‑1 (MQ=255)
                                                                                               gCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa     <  1:2164865/100‑1 (MQ=255)
                                                                                                cagccagcCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATACCCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa     <  1:766720/99‑1 (MQ=255)
                                                                                                cAGttggctggctgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagcgccagt    <  1:1363466‑M1/100‑98 (MQ=255)
                                                                                                 agccagccAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGCTCCAGTCCCCGGCAGCTGCTGCCAGAAc   >  1:3886830/1‑100 (MQ=255)
                                                                                                 agccagccAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCAGCTGccgggga   <  1:271375/100‑6 (MQ=255)
                                                                                                  |                                                                                                   
TTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT  >  NC_000913/3819421‑3819618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.