New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3819519155 (0.980)27 (0.190) 12/160 NT 15.2% coding (1652/1683 nt) ligB DNA ligase, NAD(+)‑dependent
?NC_000913 = 3819527 163 (1.150)coding (1644/1683 nt) ligB DNA ligase, NAD(+)‑dependent

Only 100 of 209 total aligned reads displayed.

ACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTG  >  NC_000913/3819431‑3819626
                                                                                                |                                                                                                   
 cTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgc                                                                                                 >  2:4343725‑M2/1‑96 (MQ=255)
 cTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgc                                                                                                 <  2:499948‑M2/100‑5 (MQ=255)
 cTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgc                                                                                                 <  2:4375095‑M2/100‑5 (MQ=255)
  tGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgcc                                                                                                >  2:3944528‑M2/1‑95 (MQ=255)
    gcgcTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgccca                                                                                              >  2:867110‑M2/1‑93 (MQ=255)
    gcgcTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAActgccca                                                                                              >  2:2512621‑M2/1‑93 (MQ=255)
      gcTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTTTGATCTGCTGGGCAGCCAGCCAActgcccagc                                                                                            >  2:1836159‑M2/1‑91 (MQ=255)
           gCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGcttctt                                                                                       >  2:3227928/1‑100 (MQ=255)
            ccTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTg                                                                                      <  2:2895586/100‑1 (MQ=255)
                  gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgc                                                                                >  1:1329755/1‑100 (MQ=255)
                  gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgc                                                                                >  2:535178/1‑100 (MQ=255)
                   cTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcg                                                                               <  2:3145296/100‑1 (MQ=255)
                   cTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcg                                                                               <  1:3231270/100‑1 (MQ=255)
                    tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGTTGGCTGGctgcccagcagatcacaggtttt                                                                              >  1:3189174‑M2/1‑77 (MQ=255)
                    tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcgc                                                                              <  2:760154/100‑1 (MQ=255)
                    tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTgcgc                                                                              >  1:3380033/1‑100 (MQ=255)
                         ttACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCAtttt                                                                         <  2:1298772/100‑1 (MQ=255)
                          tACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttc                                                                        <  1:328561/100‑1 (MQ=255)
                           aCCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttcc                                                                       <  2:1882378/100‑1 (MQ=255)
                            ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttcct                                                                      >  2:105086/1‑100 (MQ=255)
                            ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttcc                                                                       <  2:1414621/99‑1 (MQ=255)
                               gTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTttccttcc                                                                   <  1:508519/100‑1 (MQ=255)
                                 cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCan                                                                 <  2:2766989/100‑2 (MQ=255)
                                 cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAt                                                                 <  2:2399945/100‑1 (MQ=255)
                                  ttttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAtt                                                                >  1:1985474/1‑100 (MQ=255)
                                  ttttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAtt                                                                <  2:1625185/100‑1 (MQ=255)
                                   tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTc                                                               <  2:406689/100‑1 (MQ=255)
                                   tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTc                                                               >  2:3432771/1‑100 (MQ=255)
                                   tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTc                                                               <  1:26902/100‑1 (MQ=255)
                                   tttACTACAGCCACGAAGAACACTAAAATTCAAAACCTATGATCTGCTAGGAAAACAACCAAATAAACAGCTTTTTGAATTGCGAATATTCCTTACAt                                                                 >  1:2373528/1‑98 (MQ=255)
                                      actacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAt                                                            >  2:668896/1‑100 (MQ=255)
                                       ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATa                                                           >  2:2943313/1‑100 (MQ=255)
                                         acAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc                                                         >  1:2778782/1‑100 (MQ=255)
                                          cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCCGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                        >  1:1281027/1‑100 (MQ=255)
                                          cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                        <  2:3685191/100‑1 (MQ=255)
                                          cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                        <  1:1041901/100‑1 (MQ=255)
                                          cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                        <  2:2608265/100‑1 (MQ=255)
                                          cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                        <  1:378658/100‑1 (MQ=255)
                                            gCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTg                                                      >  2:2327970/1‑100 (MQ=255)
                                             ccACGAAGGACACTAAGGTTCAAAACCGGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGGATTTTCCTTCCATTCAATAAc                                                         <  1:2854363/96‑1 (MQ=255)
                                              cACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTc                                                    <  2:1113813/100‑1 (MQ=255)
                                               aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATCTGCGCATTTTCCTTCCATTCAATAACCTGTCt                                                   <  2:4175515/100‑1 (MQ=255)
                                                cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTg                                                  >  1:1838133/1‑100 (MQ=255)
                                                 gAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCGAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTg                                                  >  1:2408946/1‑99 (MQ=255)
                                                    ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcgc                                              >  2:2128925/1‑100 (MQ=255)
                                                     gACACTAAGGTTCAAAGCCTGTGATCTGCGGGGCAGCCAGGCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGcgcg                                             <  1:4360022/100‑1 (MQ=255)
                                                      acacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGt                                            >  1:2666301/1‑100 (MQ=255)
                                                       cacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc                                           >  2:1007287/1‑100 (MQ=255)
                                                         cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTccc                                         >  1:2625705/1‑100 (MQ=255)
                                                         cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTccc                                         >  1:1385686/1‑100 (MQ=255)
                                                         cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTccc                                         <  2:1794911/100‑1 (MQ=255)
                                                          tAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATACAAGAACCTGTCTGGCGCGTCCCg                                        >  1:1716591/1‑100 (MQ=255)
                                                          tAAGGGGCAAAACGGGTGATCGGCTGGGCAGCAAGCCAACTGTCCTGCTGCTGGAGTTGCGCATTTTCACTCCGTCCAGTAGCCTGTCTGGCGCGTgcc                                         <  1:4032634/99‑1 (MQ=255)
                                                             ggTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc                                     >  1:4389899/1‑100 (MQ=255)
                                                             ggTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc                                     <  2:2665362/100‑1 (MQ=255)
                                                              gTTCAAAACCTGTGATCTGCTGGGCAGCCAACCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcc                                    <  2:3525337/100‑1 (MQ=255)
                                                               ttCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCa                                   >  1:1201909/1‑100 (MQ=255)
                                                                tCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATCACCTGTCTGGCGCGTCCCGATCCAg                                  >  1:1614191/1‑100 (MQ=255)
                                                                 cAAAACCTGTGATCTGCTGGGCAGCCAGCCCACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt                                 >  1:3726432/1‑100 (MQ=255)
                                                                  aaaaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg                                  <  1:3539189/98‑1 (MQ=255)
                                                                  aaaaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc                                >  2:4278170/1‑100 (MQ=255)
                                                                   aaaCCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATCTTCCAACCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcc                               <  1:3958154/100‑1 (MQ=255)
                                                                      ccTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcccc                             <  1:2912309/99‑1 (MQ=255)
                                                                      ccTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCg                            >  1:601943/1‑100 (MQ=255)
                                                                       cTGTGATCTGCTGGGCAGCCAGCCAActgcccagctgatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagctta                           <  2:3446116‑M2/100‑75 (MQ=255)
                                                                       cTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCgg                           >  1:2990611/1‑100 (MQ=255)
                                                                       cTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCgg                           >  2:3847144/1‑100 (MQ=255)
                                                                        tgtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGc                          <  1:1165400/100‑1 (MQ=255)
                                                                        tgtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCGTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCgg                           <  1:861655/99‑1 (MQ=255)
                                                                         gtgATCTGCTGGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaag                         <  2:1584643‑M2/100‑77 (MQ=255)
                                                                         gtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCa                         <  1:4158057/100‑1 (MQ=255)
                                                                         gtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCa                         >  2:4348425/1‑100 (MQ=255)
                                                                         gtgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCa                         <  2:3365927/100‑1 (MQ=255)
                                                                          tgATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAg                        >  1:4233420/1‑100 (MQ=255)
                                                                           gATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc                       >  2:2113414/1‑100 (MQ=255)
                                                                           gATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgc                       >  2:3911983/1‑100 (MQ=255)
                                                                            ntCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct                      >  1:686352/2‑100 (MQ=255)
                                                                            aTCTGCTGGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcg                      <  2:3588041‑M2/100‑80 (MQ=255)
                                                                             tCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct                      <  1:1549976/99‑1 (MQ=255)
                                                                              ctgctgGGCAGCCAGCCAActgcccagcagatcaccggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgt                     <  1:1029131‑M2/99‑81 (MQ=255)
                                                                              ctgctgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGTCGCGTCCCGATCCAGTCCCCGGCAgctgc                    >  2:165284/1‑100 (MQ=255)
                                                                              ctgctgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctgc                    >  2:3311070/1‑100 (MQ=255)
                                                                               tgctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtag                   >  2:1398092‑M2/1‑18 (MQ=255)
                                                                               tgctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtag                   <  1:1398087‑M2/100‑83 (MQ=255)
                                                                                gctgGGCCGCCAGCCAACTACCCAGCTTCTTGATTTGCGCATTGTCCTTCCATTCAAAAAGCTGTCTTGCGCGTCCCGATCCAGTCCCCGGCAGctgctg                  >  1:3090806/1‑100 (MQ=255)
                                                                                gctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcttaaggcgtagc                  <  1:2059632‑M2/100‑84 (MQ=255)
                                                                                gctgGGCAGCCAGCCAActgcccagcagatcacaggttttgaaccttagtgtccttcgtggctgtagtaaaagaccggtaatcccagcctaaggcgcagc                  <  1:1574885‑M2/100‑84 (MQ=255)
                                                                                 ctgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc                 >  2:1785881/1‑100 (MQ=255)
                                                                                  tgGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGcc                <  1:4054157/100‑1 (MQ=255)
                                                                                   gggCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCa               >  2:3755350/1‑100 (MQ=255)
                                                                                     gCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa             <  1:2164865/100‑1 (MQ=255)
                                                                                     gCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa             <  1:639162/100‑1 (MQ=255)
                                                                                      cagccagcCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCAGCTGccgggg            <  2:2454298/100‑5 (MQ=255)
                                                                                       agccagccAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGCTCCAGTCCCCGGCAGCTGCTGCCAGAAc           >  1:3886830/1‑100 (MQ=255)
                                                                                        gccagccaACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACt          <  2:3502385/100‑1 (MQ=255)
                                                                                         ccagccaACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTg         >  2:1338856/1‑100 (MQ=255)
                                                                                          cagccaACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGc        <  2:2037965/100‑1 (MQ=255)
                                                                                              caACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCg    >  2:2543029/1‑100 (MQ=255)
                                                                                               aaCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGt   <  1:1501631/100‑1 (MQ=255)
                                                                                                aCTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTg  <  2:555284/100‑1 (MQ=255)
                                                                                                |                                                                                                   
ACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTCCGTG  >  NC_000913/3819431‑3819626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.