New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 998439 =160 (1.310)7 (0.060) 6/180 13.8 4.7% intergenic (+32/‑51) elfA/elfD laminin‑binding fimbrin subunit/putative periplasmic pilin chaperone
?NC_000913 998461 = 136 (1.230)intergenic (+54/‑29) elfA/elfD laminin‑binding fimbrin subunit/putative periplasmic pilin chaperone
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 152 total aligned reads displayed.

AGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGC  >  NC_000913/998362‑998560
                                                                                                   |                                                                                                   
aGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGa                                                                                                     <  2:782928/100‑1 (MQ=255)
aGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGa                                                                                                     <  2:1411988/100‑1 (MQ=255)
      tgtgAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCa                                                                                               >  2:536275/1‑100 (MQ=255)
      tgtgAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCa                                                                                               >  1:1369047/1‑100 (MQ=255)
       gtgAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCat                                                                                              >  1:2957927/1‑100 (MQ=255)
       gtgAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCat                                                                                              >  2:1531631/1‑100 (MQ=255)
        tgAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCata                                                                                             >  1:1475264/1‑100 (MQ=255)
           aTGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATAttt                                                                                          >  1:2350390/1‑100 (MQ=255)
                gTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATAtttttt                                                                                       <  1:393820/98‑1 (MQ=255)
                gTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTAACCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTaa                                                                                     >  1:1674037/1‑100 (MQ=255)
                 tAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAag                                                                                    <  2:793741/100‑1 (MQ=255)
                  aaCAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAaga                                                                                   <  1:98310/100‑1 (MQ=255)
                   aCAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTaa                                                                                     >  1:2454429/1‑97 (MQ=255)
                   aCAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAagag                                                                                  <  2:2980405/100‑1 (MQ=255)
                   aCAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAagag                                                                                  >  2:1407630/1‑100 (MQ=255)
                      aaTTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAagag                                                                                  >  1:1861444/1‑97 (MQ=255)
                           ccATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTAtt                                                                          >  1:1749075/1‑100 (MQ=255)
                           ccATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTAtt                                                                          >  1:2605748/1‑100 (MQ=255)
                             atatTAATTATTATTAATAGAACTCATTAATTGTTTTATTAATTATTACTCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTa                                                                        <  1:2760835/100‑1 (MQ=255)
                              tatTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTAt                                                                       <  2:615670/100‑1 (MQ=255)
                              tatTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTAt                                                                       <  2:641081/100‑1 (MQ=255)
                              tatTAACTATTATTAATAGAACTCATTAATTCTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTAt                                                                       <  1:2061134/100‑1 (MQ=255)
                               atTAACTATTATTAATAGAACTCATTAGTTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATg                                                                      >  1:1872576/1‑100 (MQ=255)
                               atTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATg                                                                      <  2:2957946/100‑1 (MQ=255)
                               atTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATg                                                                      <  1:1926302/100‑1 (MQ=255)
                               atTAACTATTATTAATAGAACTCATTAATTGTTTTAGTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATg                                                                      <  1:1694073/100‑1 (MQ=255)
                               atTAACGATTATAAATAGAACGCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTATGAGTGACTAttt                                                                         <  1:58339/97‑1 (MQ=255)
                                ttAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGa                                                                     >  2:2690662/1‑100 (MQ=255)
                                 tAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGaa                                                                    >  1:132561/1‑100 (MQ=255)
                                     tattatTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACt                                                                <  2:2265809/100‑1 (MQ=255)
                                      attattAATAGAACTCATTAATTGTTTTATTAATTAGTACACCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACtt                                                               >  1:1556868/1‑100 (MQ=255)
                                       ttattaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTg                                                              <  1:2477907/100‑1 (MQ=255)
                                        tattaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGc                                                             >  2:2584048/1‑100 (MQ=255)
                                        tattaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGc                                                             <  1:2859258/100‑1 (MQ=255)
                                        tattaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGc                                                             <  1:2956427/100‑1 (MQ=255)
                                        tattaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGc                                                             <  1:124043/100‑1 (MQ=255)
                                         attaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCa                                                            >  2:1272349/1‑100 (MQ=255)
                                         attaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCa                                                            >  1:2396456/1‑100 (MQ=255)
                                         attaATAGAACTCATTAATTGAATTATTAATTAGTACCCCTCCAGAGTTCTGAAGGGGATATTCATATTTTTTAAGTGTGACTATTTATGAAAACTTgaa                                                            >  1:811479/1‑98 (MQ=255)
                                          ttaATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCTGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCAt                                                           <  1:2151579/100‑1 (MQ=255)
                                           taATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATa                                                          <  2:1644371/100‑1 (MQ=255)
                                            aaTAGAACTCAGTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATATTTTAAGAGTGACTATTTATGAAAACTTGCATaa                                                         >  1:1615503/1‑100 (MQ=255)
                                             aTAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAAc                                                        >  1:954763/1‑100 (MQ=255)
                                               aGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACaa                                                      >  1:2268296/1‑100 (MQ=255)
                                               aGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACaa                                                      <  2:1274666/100‑1 (MQ=255)
                                               aGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATGTTTTATGAGTGACTTTTTATGAAAACTTGCATAACaa                                                      >  1:2068460/1‑100 (MQ=255)
                                                  aCTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAgg                                                   <  1:1112659/100‑1 (MQ=255)
                                                   cTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAggg                                                  <  1:1974783/100‑1 (MQ=255)
                                                     cATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGaa                                                >  1:1575177/1‑100 (MQ=255)
                                                     cATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGaa                                                >  2:1463281/1‑100 (MQ=255)
                                                        tAATTGTTTTATTAATTAGTACCCCTCAAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATtg                                             <  1:1765694/100‑1 (MQ=255)
                                                          aTTGTTTTATTAATTAGTACTCGTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAATAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATtgtg                                           <  1:292217/100‑1 (MQ=255)
                                                          aTTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATtgtg                                           <  2:1451935/100‑1 (MQ=255)
                                                          aTTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATtgtg                                           >  2:2128243/1‑100 (MQ=255)
                                                          aTTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATtgtg                                           <  1:215008/100‑1 (MQ=255)
                                                          aTTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATtgtg                                           <  2:2869942/100‑1 (MQ=255)
                                                           ttGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGTGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGa                                          <  1:1917595/100‑1 (MQ=255)
                                                              ttttATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCg                                       <  2:806574/100‑1 (MQ=255)
                                                              ttttATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCg                                       >  1:538170/1‑100 (MQ=255)
                                                                ttattaATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTa                                     >  1:1836335/1‑100 (MQ=255)
                                                                ttattaATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTa                                     >  1:2741390/1‑100 (MQ=255)
                                                                 aattaattaGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTAGCATAACAAAGGGAATTGTGACCGTaa                                    >  1:1057676/2‑100 (MQ=255)
                                                                  attaattaGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAg                                   <  2:1147729/100‑1 (MQ=255)
                                                                  attaattaGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAg                                   >  1:1732078/1‑100 (MQ=255)
                                                                  attaattaGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAg                                   >  1:408240/1‑100 (MQ=255)
                                                                   ttaattaGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGt                                  >  2:1892581/1‑100 (MQ=255)
                                                                    taattaGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGtt                                 <  2:1628209/100‑1 (MQ=255)
                                                                        taGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAAc                             >  2:1072178/1‑100 (MQ=255)
                                                                           tACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGc                          <  2:2677986/100‑1 (MQ=255)
                                                                            aCCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCa                         <  2:377694/100‑1 (MQ=255)
                                                                             ccccTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCaa                        >  2:2621911/1‑100 (MQ=255)
                                                                             ccccTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCaa                        >  1:2637533/1‑100 (MQ=255)
                                                                              cccTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAat                       <  2:1121874/100‑1 (MQ=255)
                                                                               ccTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAata                      <  1:2200500/100‑1 (MQ=255)
                                                                               ccTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAata                      >  2:2701733/1‑100 (MQ=255)
                                                                                 tccagaacacTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATAtt                    <  2:2017553/91‑1 (MQ=255)
                                                                                  ccAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTa                   >  2:1000010/1‑100 (MQ=255)
                                                                                  ccAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTa                   <  1:1437535/100‑1 (MQ=255)
                                                                                  ccAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTa                   <  2:1232462/100‑1 (MQ=255)
                                                                                   cAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTAc                  <  2:2517443/100‑1 (MQ=255)
                                                                                   cAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTAc                  <  2:2988634/100‑1 (MQ=255)
                                                                                   cAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTAc                  <  2:2963297/100‑1 (MQ=255)
                                                                                     gtgtTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTc                <  2:1535002/100‑1 (MQ=255)
                                                                                       gtTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTAGTTATGAAAAGTTGCATAAGAAAGGGAGTTGTGAGAGTAAGTTTATCGGCAatatga                   >  1:695590/1‑93 (MQ=255)
                                                                                        ttCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgc             >  2:2551699/1‑100 (MQ=255)
                                                                                        ttCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgc             <  2:1214395/100‑1 (MQ=255)
                                                                                        ttCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgc             <  2:2953809/100‑1 (MQ=255)
                                                                                         tCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTTAgct            >  1:498492/1‑100 (MQ=255)
                                                                                          cTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgctg           >  1:217052/1‑100 (MQ=255)
                                                                                          cTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgctg           >  1:775642/1‑100 (MQ=255)
                                                                                           tGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGACTTGTGACCGTAAGTTTAACGGCAATATTACTCAgctgc          <  1:1892575/100‑1 (MQ=255)
                                                                                           tGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgctgc          >  1:2406529/1‑100 (MQ=255)
                                                                                            ggAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAgctgct         >  1:1039631/1‑100 (MQ=255)
                                                                                             gAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTc        >  1:297661/1‑100 (MQ=255)
                                                                                              aGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCa       >  2:1237560/1‑100 (MQ=255)
                                                                                               ggggATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCAt      >  1:380939/1‑100 (MQ=255)
                                                                                                gggATATTTATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATc     <  1:1378842/100‑1 (MQ=255)
                                                                                                 ggATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATcc    >  2:2348408/1‑100 (MQ=255)
                                                                                                  gATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCg   <  2:2395492/100‑1 (MQ=255)
                                                                                                   atatTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGc  <  1:1184091/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAATAGAACTCATTAATTGTTTTATTAATTAGTACCCCTCCAGTGTTCTGGAGGGGATATTCATATTTTTTAAGAGTGACTATTTATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGC  >  NC_000913/998362‑998560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.