New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 361886NA (NA)5 (0.040) 5/164 NT NA noncoding (4/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 361916 NA (NA)noncoding (34/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 148 total aligned reads displayed.

TTTTCCGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCG  >  NC_000913/361787‑361984
                                                                                                   |                                                                                                  
   tCCGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtc                                                                                                 >  1:359190‑M1/1‑97 (MQ=255)
    ccGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcg                                                                                                <  1:2386634‑M1/100‑5 (MQ=255)
    ccGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcg                                                                                                <  1:1386269‑M1/100‑5 (MQ=255)
     cGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcgg                                                                                               <  2:515209‑M1/100‑6 (MQ=255)
     cGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcgg                                                                                               <  1:3008191‑M1/100‑6 (MQ=255)
      ggTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcgga                                                                                              >  2:1026762‑M1/1‑94 (MQ=255)
       gTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcggat                                                                                             <  1:98611‑M1/100‑8 (MQ=255)
       gTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcggat                                                                                             >  2:2604389‑M1/1‑93 (MQ=255)
         aaGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATaa                                                                                           >  2:1928223/1‑100 (MQ=255)
         aaGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATaa                                                                                           >  2:1717694/1‑100 (MQ=255)
          aGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAg                                                                                          >  1:1584349/1‑100 (MQ=255)
           gCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAgg                                                                                         <  2:263751/100‑1 (MQ=255)
           gCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAgg                                                                                         <  2:482982/100‑1 (MQ=255)
             cTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGgcg                                                                                       <  2:332236/100‑1 (MQ=255)
              ttCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGgcgc                                                                                      >  1:1873347/1‑100 (MQ=255)
                  cacaTATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTcgc                                                                                  >  2:2903923/1‑100 (MQ=255)
                  cacaTATCGGTAAATAGCTAGCCTGCTCTTATTCTTTCGGTTATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGACCGGATAAGGCGCTcgc                                                                                  >  1:587685/1‑100 (MQ=255)
                      tatCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcggatgcggcgcgagcgcct                                                                              <  1:105906‑M1/100‑23 (MQ=255)
                      tatCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGcgccg                                                                              >  2:1072147/1‑100 (MQ=255)
                       atCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGcgccgc                                                                             >  2:1907547/1‑100 (MQ=255)
                       accGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGcgccgc                                                                             >  2:2271237/3‑100 (MQ=255)
                        tCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCA                                                                            >  2:2439653‑M2/1‑100 (MQ=255)
                        tCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCA                                                                            <  1:2649271‑M2/100‑1 (MQ=255)
                        tCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCA                                                                            <  1:2659932‑M2/100‑1 (MQ=255)
                         cGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGcgccg                                                                              <  2:1692504/97‑1 (MQ=255)
                         cGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCAT                                                                           <  2:662037‑M2/100‑1 (MQ=255)
                          ggTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcggatgcggcgcgagcgccttatc                                                                          >  2:1790083‑M1/1‑74 (MQ=255)
                          ggTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATC                                                                          >  2:1995713‑M2/1‑100 (MQ=255)
                          ggTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATC                                                                          <  1:3149457‑M2/100‑1 (MQ=255)
                          ggTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATC                                                                          <  2:1470583‑M2/100‑1 (MQ=255)
                           gTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTGTGATATGTTGgtcggatgcggcgcgagcgccttatcc                                                                         <  1:1790072‑M1/100‑28 (MQ=255)
                            tAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGgtcggatgcggcgcgagcgccttatccg                                                                        <  1:2116582‑M1/100‑29 (MQ=255)
                            tAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCG                                                                        <  1:1422499‑M2/100‑1 (MQ=255)
                            tAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCG                                                                        >  1:3256379‑M2/1‑100 (MQ=255)
                              aaTAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGAC                                                                      >  2:2679318‑M2/1‑100 (MQ=255)
                                    ttGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgat                                                                <  1:2703344/100‑1 (MQ=255)
                                     tGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgatt                                                               <  2:1191551/100‑1 (MQ=255)
                                      gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                              <  2:1658464/100‑1 (MQ=255)
                                      gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                              <  2:2507072/100‑1 (MQ=255)
                                       ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                             <  2:575171/100‑1 (MQ=255)
                                        cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                            <  2:463492/100‑1 (MQ=255)
                                        cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                            <  2:1044186/100‑1 (MQ=255)
                                         tGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCtt                                                           >  1:2295106/1‑100 (MQ=255)
                                             ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                       <  2:958219/100‑1 (MQ=255)
                                             ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                       >  2:3331315/1‑100 (MQ=255)
                                             ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                       <  2:2705317/100‑1 (MQ=255)
                                              ttATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCg                                                      <  1:533329/100‑1 (MQ=255)
                                               tATTCTTTCGGTCATTGGCATGTTCAATGCGATCACGCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGa                                                     >  2:2357952/1‑100 (MQ=255)
                                                aTTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGAc                                                    <  2:1058953/100‑1 (MQ=255)
                                                 ttCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACt                                                   >  2:313232/1‑100 (MQ=255)
                                                 ttCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACt                                                   <  2:2479934/100‑1 (MQ=255)
                                                   cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                 <  1:341439/100‑1 (MQ=255)
                                                   cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                 >  2:206494/1‑100 (MQ=255)
                                                     ttCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcat                                               <  2:3312709/100‑1 (MQ=255)
                                                        ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattc                                             >  1:1311968/1‑99 (MQ=255)
                                                         gTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAc                                           >  1:2657428/1‑100 (MQ=255)
                                                          tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                          <  2:2006436/100‑1 (MQ=255)
                                                          tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                          <  1:746748/100‑1 (MQ=255)
                                                           cATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcca                                         >  1:2006422/1‑99 (MQ=255)
                                                           cATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCt                                         >  1:1169791/1‑100 (MQ=255)
                                                           cATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCt                                         >  1:2388801/1‑100 (MQ=255)
                                                             ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTga                                       >  2:1120428/1‑100 (MQ=255)
                                                             ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTga                                       >  1:1032256/1‑100 (MQ=255)
                                                              tGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgac                                      <  1:662036/100‑1 (MQ=255)
                                                               ggCATGTTCAATGCGATCACTCCGTTATGATATGTTAGTCGGATGCGGCGCGAGCGCCTTATCCGACcaacatatcataacggagtgatcgcattgaac                                      >  1:1513139‑M2/1‑67 (MQ=255)
                                                                   tGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgc                                 <  2:819555/100‑1 (MQ=255)
                                                                    gTTCAATGCGATCACTCCGTTATGATATGTTGgtcggataaggcgctcgcgccgcatccgactaacatatcataacggagtgatcgcattgaacatgcc                                 >  1:1513139‑M1/1‑32 (MQ=255)
                                                                      tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                              <  1:1290842/100‑1 (MQ=255)
                                                                        aaTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGcagcag                            <  2:3239776/100‑1 (MQ=255)
                                                                          tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                          >  2:93146/1‑100 (MQ=255)
                                                                          tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGATCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                          <  1:2922165/100‑1 (MQ=255)
                                                                           gCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGa                         >  2:1959811/1‑100 (MQ=255)
                                                                             gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                       >  1:3242865/1‑100 (MQ=255)
                                                                             gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                       >  1:647797/1‑100 (MQ=255)
                                                                              aTCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAg                      <  1:1998247/100‑1 (MQ=255)
                                                                               tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                     >  1:2799936/1‑100 (MQ=255)
                                                                                cACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCg                    >  2:2781210/1‑100 (MQ=255)
                                                                                 aCTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgg                   >  1:1190058/1‑100 (MQ=255)
                                                                                  cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                  >  1:1681369/1‑100 (MQ=255)
                                                                                   tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                 <  2:1811384/100‑1 (MQ=255)
                                                                                    ncGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                 >  1:2882575/2‑99 (MQ=255)
                                                                                    ccgatctGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggcc                <  2:850045/94‑1 (MQ=255)
                                                                                    ccGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggcc                <  1:1702224/100‑1 (MQ=255)
                                                                                     cGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccg               >  1:2980543/1‑100 (MQ=255)
                                                                                       ttATGATATGTTGGTCGGATAAGGCGCTCGCGGCGCATCTGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggg             <  1:2350382/100‑1 (MQ=255)
                                                                                       ttATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggn             <  2:1387463/100‑2 (MQ=255)
                                                                                          tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc          >  1:1122157/1‑100 (MQ=255)
                                                                                          tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc          <  2:1422505/100‑1 (MQ=255)
                                                                                           gATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccagatcgg         >  1:850043/1‑93 (MQ=255)
                                                                                            atatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGc        <  2:2241920/100‑1 (MQ=255)
                                                                                            atatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGc        <  2:2367425/100‑1 (MQ=255)
                                                                                              atGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTa      <  2:1727539/100‑1 (MQ=255)
                                                                                              atGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTAATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt       >  1:2145888/1‑99 (MQ=255)
                                                                                               tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa     >  1:1568324/1‑100 (MQ=255)
                                                                                               tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa     >  1:281132/1‑100 (MQ=255)
                                                                                               tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa     >  2:2673838/1‑100 (MQ=255)
                                                                                                gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttc    <  2:1584355/100‑4 (MQ=38)
                                                                                                 ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttcc   <  2:3222581/100‑5 (MQ=38)
                                                                                                  tGGTCGGATAAGGCGCTCGCGCTGCATGCGACATTGATTGCTTAAGCGACTTCATTCACCTGACAACGCAGCAGGGAAAGCGCGCCGGGGCCGCTAAGCg  <  1:305184/100‑1 (MQ=39)
                                                                                                   ggTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg  >  1:2707954/1‑99 (MQ=255)
                                                                                                   |                                                                                                  
TTTTCCGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCG  >  NC_000913/361787‑361984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.