New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 361886NA (NA)5 (0.040) 5/164 NT NA noncoding (4/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 361916 NA (NA)noncoding (34/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 137 total aligned reads displayed.

AATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGC  >  NC_000913/361817‑362013
                                                                                                   |                                                                                                 
aaTAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGAC                                                                                                   >  2:2679318‑M2/1‑100 (MQ=255)
  cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                 >  2:483732‑M1/69‑100 (MQ=255)
  cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                 >  2:1680617‑M1/69‑100 (MQ=255)
    gCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattg                                                                                               >  2:2648243/1‑100 (MQ=255)
      ttGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgat                                                                                             <  1:2703344/100‑1 (MQ=255)
       tGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgatt                                                                                            <  2:1191551/100‑1 (MQ=255)
        gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                           <  2:1658464/100‑1 (MQ=255)
          cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                         <  1:1143615/100‑1 (MQ=255)
          cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                         <  2:1044186/100‑1 (MQ=255)
          cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                         <  2:463492/100‑1 (MQ=255)
           tGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCtt                                                                                        >  1:2295106/1‑100 (MQ=255)
              tctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAg                                                                                     <  2:1844168/100‑1 (MQ=255)
               ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                    <  2:958219/100‑1 (MQ=255)
               ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                    >  2:3331315/1‑100 (MQ=255)
                ttATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCg                                                                                   <  1:533329/100‑1 (MQ=255)
                 tATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGa                                                                                  >  2:1616974/1‑100 (MQ=255)
                 tATTCTTTCGGTCATTGGCATGTTCAATGCGATCACGCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGa                                                                                  >  2:2357952/1‑100 (MQ=255)
                  aTTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGAc                                                                                 <  2:1058953/100‑1 (MQ=255)
                   ttCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACt                                                                                <  2:2479934/100‑1 (MQ=255)
                   ttCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACt                                                                                >  2:313232/1‑100 (MQ=255)
                     cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                              >  2:206494/1‑100 (MQ=255)
                     cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                              <  1:341439/100‑1 (MQ=255)
                          ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattc                                                                          >  1:1311968/1‑99 (MQ=255)
                            tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                       <  1:746748/100‑1 (MQ=255)
                            tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                       <  1:2674337/100‑1 (MQ=255)
                             cATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcca                                                                      >  1:2006422/1‑99 (MQ=255)
                             cATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCt                                                                      >  1:1169791/1‑100 (MQ=255)
                             cATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCt                                                                      >  1:2388801/1‑100 (MQ=255)
                               ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTga                                                                    >  2:1120428/1‑100 (MQ=255)
                               ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTga                                                                    >  1:1032256/1‑100 (MQ=255)
                                tGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgac                                                                   <  1:662036/100‑1 (MQ=255)
                                 ggCATGTTCAATGCGATCACTCCGTTATGATATGTTAGTCGGATGCGGCGCGAGCGCCTTATCCGACcaacatatcataacggagtgatcgcattgaac                                                                   >  1:1513139‑M2/1‑67 (MQ=255)
                                   gtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacgac                                                                <  2:1487656‑M1/65‑1 (MQ=255)
                                    aTGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGacgacg                                                               >  1:1344366/1‑100 (MQ=255)
                                     tGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgc                                                              <  2:819555/100‑1 (MQ=255)
                                        tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                           <  1:1290842/100‑1 (MQ=255)
                                          aaTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGcagcag                                                         <  2:3239776/100‑1 (MQ=255)
                                            tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                       >  2:93146/1‑100 (MQ=255)
                                            tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                       <  2:1787659/100‑1 (MQ=255)
                                            tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGATCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                       <  1:2922165/100‑1 (MQ=255)
                                             gCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGa                                                      >  2:1959811/1‑100 (MQ=255)
                                             gCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGa                                                      <  1:394847/100‑1 (MQ=255)
                                              cGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaa                                                     >  2:2140312/1‑100 (MQ=255)
                                               gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                                                    >  1:647797/1‑100 (MQ=255)
                                               gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                                                    >  1:3242865/1‑100 (MQ=255)
                                                 tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                  >  1:2799929/1‑100 (MQ=255)
                                                 tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                  >  1:2799936/1‑100 (MQ=255)
                                                  cACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCg                                                 >  2:2781210/1‑100 (MQ=255)
                                                   aCTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgg                                                >  1:1190058/1‑100 (MQ=255)
                                                    cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                               >  1:1681369/1‑100 (MQ=255)
                                                      ncGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                              >  1:2882575/2‑99 (MQ=255)
                                                      ccgatctGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggcc                                             <  2:850045/94‑1 (MQ=255)
                                                      ccGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggcc                                             >  1:1704506/1‑100 (MQ=255)
                                                      ccGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggcc                                             <  1:2814132/100‑1 (MQ=255)
                                                      ccGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAACAGGGAAAGCgggcc                                             >  2:3292764/1‑100 (MQ=255)
                                                       cGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccg                                            >  1:2980543/1‑100 (MQ=255)
                                                         ttATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggn                                          <  2:1387463/100‑2 (MQ=255)
                                                            tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                       <  2:1422505/100‑1 (MQ=255)
                                                              atatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGc                                     <  2:2367425/100‑1 (MQ=255)
                                                              atatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGc                                     <  2:2241920/100‑1 (MQ=255)
                                                                atGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTa                                   <  2:1727539/100‑1 (MQ=255)
                                                                 tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                  >  2:2673838/1‑100 (MQ=255)
                                                                 tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                  >  2:2561690/1‑100 (MQ=255)
                                                                 tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                  >  1:1568324/1‑100 (MQ=255)
                                                                   ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttcc                                <  2:3222581/100‑5 (MQ=38)
                                                                    tGGTCGGATAAGGCGCTCGCGCTGCATGCGACATTGATTGCTTAAGCGACTTCATTCACCTGACAACGCAGCAGGGAAAGCGCGCCGGGGCCGCTAAGCg                               <  1:305184/100‑1 (MQ=39)
                                                                      GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                             <  2:2680763‑M1/100‑1 (MQ=255)
                                                                      GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                             <  2:1102865‑M1/100‑1 (MQ=255)
                                                                      GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                             >  2:3149483‑M1/1‑100 (MQ=255)
                                                                      GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                             >  2:1468684‑M1/1‑100 (MQ=255)
                                                                       tCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccctgc                            <  1:1965250/100‑9 (MQ=37)
                                                                       TCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                            >  2:2020243‑M1/1‑100 (MQ=255)
                                                                       TCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                            >  2:2706879‑M1/1‑100 (MQ=255)
                                                                        cGGATAAGGCGCTCGCGCCGCATCCGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctattta                           <  1:2116582‑M2/100‑73 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCGCATCCGACcaacatatcacaacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttac                          <  1:1790072‑M2/100‑74 (MQ=255)
                                                                         GGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                          <  2:1330688‑M1/100‑1 (MQ=255)
                                                                          gATAAGGCGCTCGCGCCGCATCCGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttacc                         >  2:1790083‑M2/1‑26 (MQ=255)
                                                                          GATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCCCCTGACGACGCAGCAGGGAAAGCGGACCGGGGCCGCTAAGCGTGAaca                         <  2:361235‑M1/100‑1 (MQ=255)
                                                                          GATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAaca                         <  2:2499514‑M1/100‑1 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgata                     <  1:105906‑M2/100‑79 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGGCGGGGCCGCTAAGCGTGAACACGGa                     >  1:464170/1‑100 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                     >  1:139387/1‑100 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                     >  1:1014343/1‑100 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                     <  2:43632/100‑1 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                     >  2:1044602/1‑100 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                    <  2:944364/100‑1 (MQ=255)
                                                                                  gcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAtt                 >  1:2171897/1‑100 (MQ=255)
                                                                                      gcgcCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg             <  1:2689006/100‑1 (MQ=255)
                                                                                        gccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTg           <  2:359190/100‑1 (MQ=255)
                                                                                           gcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAg        <  1:2293600/100‑1 (MQ=255)
                                                                                           gcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAg        >  2:2718142/1‑100 (MQ=255)
                                                                                             aTCCGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttac      <  1:98611‑M2/100‑94 (MQ=255)
                                                                                             aTCCGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttac      >  2:2604389‑M2/1‑7 (MQ=255)
                                                                                              tCCGATcaacatatcataacggagtgatcgcattgaaaatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttacc     >  1:249154‑M2/1‑6 (MQ=255)
                                                                                              tCCGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttacc     >  2:533329‑M2/1‑6 (MQ=255)
                                                                                               ccGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttaccg    <  1:3008191‑M2/100‑96 (MQ=255)
                                                                                               ccGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttaccg    <  2:515209‑M2/100‑96 (MQ=255)
                                                                                                cGACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttaccgg   <  1:2386634‑M2/100‑97 (MQ=255)
                                                                                                 gACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttaccgga  >  1:944361‑M2/1‑3 (MQ=255)
                                                                                                 gACcaacatatcataacggagtgatcgcattgaacatgccaatgaccgaaagaataagagcaggcaagctatttaccgatatgtgcgaaggcttaccgga  <  1:161714‑M2/100‑98 (MQ=255)
                                                                                                   |                                                                                                 
AATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGC  >  NC_000913/361817‑362013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.