New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3539757 =NA (NA)12 (0.100) 8/160 NT NA noncoding (12/34 nt) REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3539792 = NA (NA)intergenic (+86/‑371) yhgF/feoA putative transcriptional accessory protein/ferrous iron transporter, protein A

Only 100 of 185 total aligned reads displayed.

TAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATA  >  NC_000913/3539658‑3539854
                                                                                                   |                                                                                                  
tAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATa                                                                                                    <  2:3441469/100‑1 (MQ=255)
 cagttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcaa                                                                                                   <  1:2360063‑M1/2‑1 (MQ=255)
  agttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAg                                                                                                  <  2:1751514‑M1/3‑1 (MQ=255)
   gttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAgg                                                                                                 >  2:2331977‑M1/97‑100 (MQ=255)
   gttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAgg                                                                                                 <  1:284462‑M1/4‑1 (MQ=255)
   gttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAgg                                                                                                 >  2:3688590‑M1/97‑100 (MQ=255)
   gttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAgg                                                                                                 >  2:3142551‑M1/97‑100 (MQ=255)
   cgcgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAgg                                                                                                 >  2:724585/1‑100 (MQ=255)
   cgcgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTGCGAATTTGCACGAAATCGTAGGGCAGATAAgg                                                                                                 <  1:2577517/100‑1 (MQ=255)
    gcgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGc                                                                                                <  2:3493710/100‑1 (MQ=255)
     tgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCg                                                                                               >  2:2151149‑M1/95‑100 (MQ=255)
      gttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGt                                                                                              <  1:1135514‑M1/7‑1 (MQ=255)
        taatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTc                                                                                            <  1:723921‑M1/9‑1 (MQ=255)
         gatggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTc                                                                                            <  1:2334735/99‑1 (MQ=255)
         gatggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCa                                                                                           >  2:2360077/1‑100 (MQ=255)
           tggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcg                                                                                         >  2:3442515/1‑100 (MQ=255)
            ggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcgc                                                                                        <  2:358652/100‑1 (MQ=255)
             gatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcgcc                                                                                       <  1:2785758/100‑1 (MQ=255)
                  gcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATc                                                                                  >  1:3191429/1‑100 (MQ=255)
                   cTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCt                                                                                 >  1:15205/1‑100 (MQ=255)
                     ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTgg                                                                               >  2:2251836/1‑100 (MQ=255)
                       cggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                             >  2:1606532/1‑100 (MQ=255)
                             cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacgaac                                                                       <  2:3208592/100‑1 (MQ=255)
                             cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacgaac                                                                       <  1:3395517/100‑1 (MQ=255)
                             cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacgaac                                                                       >  1:2094979/1‑100 (MQ=255)
                             cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacgaac                                                                       >  2:48321/1‑100 (MQ=255)
                              aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacgaacg                                                                      <  1:3366499/100‑1 (MQ=255)
                                aatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGc                                                                     >  2:2280225‑M1/68‑99 (MQ=255)
                                 gggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCt                                                                   <  1:757169/100‑1 (MQ=255)
                                 gggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCt                                                                   >  2:1387925/1‑100 (MQ=255)
                                  tatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCtt                                                                  >  1:2671709‑M1/66‑100 (MQ=255)
                                  ggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCtt                                                                  >  1:1615292/1‑100 (MQ=255)
                                   gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                 >  2:3308964/1‑100 (MQ=255)
                                   gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                 >  2:1040831/1‑100 (MQ=255)
                                   atattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                 >  2:375227‑M1/65‑100 (MQ=255)
                                    cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc                                                                >  2:1709035/1‑100 (MQ=255)
                                     attatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc                                                                >  1:620183‑M1/63‑99 (MQ=255)
                                     aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc                                                               <  1:325641/100‑1 (MQ=255)
                                     aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc                                                               <  1:3215155/100‑1 (MQ=255)
                                     aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc                                                               >  1:3630256/1‑100 (MQ=255)
                                      ttatgagttttgctatggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCTTTGc                                                                >  1:2085894‑M1/62‑98 (MQ=255)
                                      aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCt                                                              >  2:254306/1‑100 (MQ=255)
                                       aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTg                                                             <  2:124426/100‑1 (MQ=255)
                                       aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTg                                                             <  2:2939794/100‑1 (MQ=255)
                                        aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGa                                                            <  2:911912/100‑1 (MQ=255)
                                        aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGa                                                            >  2:1580955/1‑100 (MQ=255)
                                          aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACa                                                          <  2:2139932/100‑1 (MQ=255)
                                           cGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTTCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACAt                                                         <  2:1060631/100‑1 (MQ=255)
                                           cGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACAt                                                         >  2:591189/1‑100 (MQ=255)
                                           cGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACAt                                                         >  1:3432424/1‑100 (MQ=255)
                                            gTTAAACGCCCGTGCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATa                                                        >  2:2512641/1‑100 (MQ=255)
                                            gTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAGCGCCTTGCCTGACATa                                                        >  1:2188262/1‑100 (MQ=255)
                                               aaaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaaa                                                     <  1:3384670/100‑1 (MQ=255)
                                                ggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg                                                    >  2:3253425‑M1/52‑100 (MQ=255)
                                                aaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAAGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg                                                    >  2:308776/1‑100 (MQ=255)
                                                  cGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg                                                  >  1:1956354/1‑100 (MQ=255)
                                                  cGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg                                                  <  2:1305100/100‑1 (MQ=255)
                                                    cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc                                                >  2:2818555/1‑100 (MQ=255)
                                                     ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCg                                               <  2:2993277/100‑1 (MQ=255)
                                                      cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg                                              <  1:452734/100‑1 (MQ=255)
                                                         aCTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga                                           <  2:679337/100‑1 (MQ=255)
                                                            ggCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata                                        >  2:1399418/1‑100 (MQ=255)
                                                              ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATATGGAAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtc                                     >  2:3110940/1‑100 (MQ=255)
                                                               cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct                                    >  1:2969851/1‑100 (MQ=255)
                                                                 aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc                                  >  1:1533793/1‑100 (MQ=255)
                                                                  cGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCg                                 <  1:608312/100‑1 (MQ=255)
                                                                  cGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCg                                 <  2:601552/100‑1 (MQ=255)
                                                                    gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc                               >  1:627630/1‑100 (MQ=255)
                                                                    gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATATTCTCCGGc                               <  2:1331296/100‑1 (MQ=38)
                                                                     ttCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCa                              >  1:851991/1‑100 (MQ=255)
                                                                       cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt                            <  2:1075219/100‑1 (MQ=255)
                                                                       cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGATATTCTCCGGCact                            <  2:3244013/100‑3 (MQ=38)
                                                                         aaTTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtttt                          >  1:1663442/1‑100 (MQ=255)
                                                                          aTTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttttt                         >  2:1340680/1‑100 (MQ=255)
                                                                           tttGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTa                        <  1:1003019/100‑1 (MQ=255)
                                                                             tGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAtt                      >  2:1144126/1‑100 (MQ=255)
                                                                             tGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATATTCTCCGGCACTTTTAtg                      <  2:1654192/100‑2 (MQ=25)
                                                                              gCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTc                     >  2:850787/1‑100 (MQ=255)
                                                                              gCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATGTTTATTc                     >  1:2008896/1‑100 (MQ=255)
                                                                                aCGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCca                   >  1:126908/1‑100 (MQ=255)
                                                                                 cGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac                  <  1:3139958/100‑1 (MQ=255)
                                                                                 cGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac                  >  1:1906536/1‑100 (MQ=255)
                                                                                 cGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATATTCTCCGGCACTTTTAtgtcag                  <  1:2494418/100‑6 (MQ=25)
                                                                                      tCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa             >  1:2495993/1‑100 (MQ=255)
                                                                                      tCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa             <  1:1709028/100‑1 (MQ=255)
                                                                                       cGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaa            >  1:1321619/1‑100 (MQ=255)
                                                                                        gTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa           >  1:655051/1‑100 (MQ=255)
                                                                                         tAGGGCAGATATGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGTCTTACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc          <  1:2937472/100‑1 (MQ=255)
                                                                                         tAGGGCAGATAAGGCGTTCACGCCGCGTCGTGCAACGGACGCGTTGCCTGACATAAAAGTGCCGGAGAATAGCTCCGGCATGTTTATTCCACAGCCaaan          <  1:3561455/100‑2 (MQ=255)
                                                                                         tAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc          <  2:2733062/100‑1 (MQ=255)
                                                                                          aGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACt         <  1:2413182/100‑1 (MQ=255)
                                                                                            ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACtga       >  1:2272362/1‑98 (MQ=255)
                                                                                            ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa       <  2:1534584/100‑1 (MQ=255)
                                                                                            ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa       <  2:2446058/100‑1 (MQ=255)
                                                                                             gCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat      >  2:1256029/1‑100 (MQ=255)
                                                                                             gCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat      <  2:570112/100‑1 (MQ=255)
                                                                                              cAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCata     >  2:1655828/1‑100 (MQ=255)
                                                                                               aGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataa    <  1:1815263/100‑1 (MQ=255)
                                                                                               aGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATATTTATTCCACAGCCAAACTCataa    >  2:2010309/1‑100 (MQ=255)
                                                                                                 aTAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataata  <  2:2099573/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
TAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATA  >  NC_000913/3539658‑3539854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.