BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4484333 =	NA (NA)	6 (0.050)	6/164	NT	NA	noncoding (1/84 nt)	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4484365 =	NA (NA)	6 (0.050)	6/164	NT	NA	noncoding (33/84 nt)	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 197 total aligned reads displayed.

TCGACGGTGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCT  >  NC_000913/4484234‑4484432

gctgggtttaacggcgaagagtaattgcgtcaggcaaggctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagg                                                                                                     >  1:69840‑M1/100‑100 (MQ=255)

 cGACGGTGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAgcgc                                                                                                    >  2:227246/1‑100 (MQ=255)

 cGACGGTGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAgcgc                                                                                                    >  2:1133228/1‑100 (MQ=255)

  gACGGTGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGAATACACCGCAgcgc                                                                                                    >  1:1091745/1‑99 (MQ=255)

   gggtttaacggcgcagagtaattgcgtcaggcaaggctgttattgccggatgcggcgtgaacgccttatccgacctccacagcactgaactcgtagGCCt                                                                                                  <  1:90625‑M1/4‑1 (MQ=255)

   gggtttaacggcgaagagtaattgcgtcaggcaaggctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCt                                                                                                  <  2:863032‑M1/4‑1 (MQ=255)

     gtttaacggcgaagagtaattgcgtcaggcaagactgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCtgn                                                                                                >  1:2715494‑M1/95‑99 (MQ=255)

      tttaacggcgaagagtaattgcgtcaggcaaggctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCTGAt                                                                                               >  2:3682447‑M1/94‑100 (MQ=255)

      tttaacggcgaagagtaattgcgtcaggcaaggctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCTGAt                                                                                               >  2:1261013‑M1/94‑100 (MQ=255)

      gtggtgTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGAt                                                                                               <  2:2367765/100‑1 (MQ=255)

        ggtgTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGc                                                                                             <  2:163686/100‑1 (MQ=255)

        ggtgTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGc                                                                                             <  2:692980/100‑1 (MQ=255)

         gtgtCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCg                                                                                            <  1:3653590/100‑1 (MQ=255)

           gtCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGAc                                                                                          >  2:2148345/1‑100 (MQ=255)

           gtCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGAc                                                                                          >  2:1846674/1‑100 (MQ=255)

           gtCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGAc                                                                                          <  1:2492362/100‑1 (MQ=255)

           gtCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCATGATGCGAc                                                                                          <  1:124896/100‑1 (MQ=255)

           gtCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTACACACCGCAGCGCCTGATGCGAc                                                                                          <  1:2163538/100‑1 (MQ=255)

             cATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGc                                                                                        <  1:1648951/100‑1 (MQ=255)

             cATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGc                                                                                        >  2:502647/1‑100 (MQ=255)

             cATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGACTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGc                                                                                        >  1:2384588/1‑100 (MQ=255)

              aTTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCt                                                                                       >  2:2901428/1‑100 (MQ=255)

              aTTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCt                                                                                       >  2:1921219/1‑100 (MQ=255)

              aTTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCt                                                                                       >  1:959569/1‑100 (MQ=255)

                  tctaGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCtgttg                                                                                   <  2:3453835/97‑1 (MQ=255)

                   ccAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCtgttgt                                                                                  <  1:379984/100‑1 (MQ=255)

                   ccAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCtgttgt                                                                                  <  1:2778054/100‑1 (MQ=255)

                   ccAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCtgttgt                                                                                  >  1:874255/1‑100 (MQ=255)

                    cAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTtgtg                                                                                 <  1:2873451/100‑1 (MQ=255)

                    cAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTtgtg                                                                                 >  1:1146176/1‑100 (MQ=255)

                    cAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATAAGGTATACACCGCAGCGCCTGATGCGACGCTGTtgtg                                                                                 <  1:1991146/100‑1 (MQ=255)

                     aGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCtgttgaga                                                                                >  1:3453811/1‑97 (MQ=255)

                     aGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTgtgt                                                                                >  1:3224505/1‑100 (MQ=255)

                       aaGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCt                                                                              <  2:3528172/100‑1 (MQ=255)

                         ggTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTa                                                                            >  2:2828992/1‑100 (MQ=255)

                         ggTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTa                                                                            >  2:2761263/1‑100 (MQ=255)

                          gTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTAt                                                                           >  1:2318794/1‑100 (MQ=255)

                          gTAGAACGGCGCGTTTTTCATAAATCGGGCTTCTTATGGTGGACTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTCTCTTa                                                                            <  1:419262/99‑1 (MQ=255)

                           tAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATc                                                                          <  1:3579433/100‑1 (MQ=255)

                            aGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCa                                                                         >  1:1350580/1‑100 (MQ=255)

                                ggcaaggctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCTGATGCGACGCTGTTGTGTCTTATCAGGcc                                                                     >  1:2370731‑M1/68‑100 (MQ=255)

                                 gTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCt                                                                    >  1:2546027/1‑100 (MQ=255)

                                 gTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCt                                                                    <  1:253010/100‑1 (MQ=255)

                                  caaggctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTa                                                                   >  2:2932379‑M1/66‑100 (MQ=255)

                                    gcgTTTTTCACAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACg                                                                 <  1:2449865/100‑1 (MQ=255)

                                     cgTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCACAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGa                                                                >  1:2627899/1‑100 (MQ=255)

                                      gTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAg                                                               <  1:1569442/100‑1 (MQ=255)

                                      gTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAg                                                               <  1:3565726/100‑1 (MQ=255)

                                       ctgttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGt                                                              >  2:1100328‑M1/61‑100 (MQ=255)

                                        ttttCATATATGGGGCTTCTTGTGGTGGATTTAATTTCGTAGTAGGTATACACCGCAGCGCTAGATGTGACGCTATGGTGTCTTATCAGGCCTACGAGtt                                                             <  1:1836133/100‑1 (MQ=255)

                                         tttCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGCTGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTc                                                            >  2:3335998/1‑100 (MQ=255)

                                         tttCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTc                                                            <  2:3360807/100‑1 (MQ=255)

                                          ttCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGTCCTACGAGTTCa                                                           <  2:2461283/100‑1 (MQ=255)

                                            cATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGt                                                         >  1:2668284/1‑100 (MQ=255)

                                            cATAAATGGGGCTTCTTGT‑GTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGATCAGTg                                                        >  1:1686369/1‑100 (MQ=255)

                                             aTAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTg                                                        <  1:641194/100‑1 (MQ=255)

                                             aTAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTg                                                        >  2:1992419/1‑100 (MQ=255)

                                              tAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGc                                                       >  1:50227/1‑100 (MQ=255)

                                                aaTGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCtg                                                     <  2:2483283/100‑1 (MQ=255)

                                                     ggCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg                                                >  2:3061142/1‑100 (MQ=255)

                                                      gCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg                                               <  1:2205666/100‑1 (MQ=255)

                                                      gCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg                                               <  1:3394033/100‑1 (MQ=255)

                                                      gCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAgg                                               <  2:1661406/100‑1 (MQ=255)

                                                        ggcgtgaacgccttatccgacctacacagcactgaactcgtagGCCAGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTc                                             <  1:2065931‑M1/57‑1 (MQ=255)

                                                         tcttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg                                            <  1:2932396/100‑1 (MQ=255)

                                                         tcttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg                                            >  2:1050869/1‑100 (MQ=255)

                                                          cttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAg                                                <  1:447657/95‑1 (MQ=255)

                                                           ttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGa                                          <  2:2570291/100‑1 (MQ=255)

                                                            tgtgGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt                                         >  1:3346194/1‑100 (MQ=255)

                                                            tgtgGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt                                         >  2:2254839/1‑100 (MQ=255)

                                                               ggtggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAg                                      <  2:742885/100‑1 (MQ=255)

                                                               ggtggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAg                                      >  1:1136821/1‑100 (MQ=255)

                                                                 tggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGc                                    >  1:3152122/1‑100 (MQ=255)

                                                                  ggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCg                                   <  2:2668301/100‑1 (MQ=255)

                                                                    aTTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt                                 <  2:140327/100‑1 (MQ=255)

                                                                      ttAAATCCGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCCGATAAGGCGttta                               <  2:2520590/100‑3 (MQ=255)

                                                                       tAAATACGCATCAGGTATACACCGCAGTGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAc                              >  1:982951/1‑100 (MQ=255)

                                                                       tAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAc                              >  2:206440/1‑100 (MQ=255)

                                                                        aaaTACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAcg                             <  1:1870373/100‑1 (MQ=255)

                                                                          aTACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAcgcc                           <  2:3424128/100‑1 (MQ=255)

                                                                           tACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATATGGCGTTCAcgctg                          <  2:2534373/100‑3 (MQ=255)

                                                                             tgCATCAGGTATACACCGCAGCGCCTGATGCGTCGCTGTTGTGTATTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATACGGCGTTCAcgccgga                        >  1:3204204/2‑98 (MQ=38)

                                                                             cGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCa                        <  2:1247474/100‑1 (MQ=255)

                                                                              gCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCAt                       >  2:3404435/1‑100 (MQ=255)

                                                                               cATCAGGTATACACCGCAGCGCCTGATGCGACGCTTTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGGTCACGCCGCATc                      >  2:170442/1‑100 (MQ=255)

                                                                               cATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATc                      >  2:611792/1‑100 (MQ=255)

                                                                                aTCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATcc                     >  2:1790755/1‑100 (MQ=255)

                                                                                  cAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCgg                   >  2:3151216/1‑100 (MQ=255)

                                                                                   aGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGc                  >  2:877867/1‑100 (MQ=255)

                                                                                   aGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGc                  <  2:3590175/100‑1 (MQ=255)

                                                                                    ggTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGc                  >  1:1901768/1‑99 (MQ=255)

                                                                                      tgtgtcccGCGGCGGCTGCTGTGACGTGGTTGTGCCTTATCAGGCCTGCGAGTGCAGTGCTGTGTAGGTCGGATGAGGCGTTCGCGCCGCa                        <  1:3335975/85‑1 (MQ=255)

                                                                                       ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa              <  1:147470/100‑1 (MQ=255)

                                                                                       ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa              >  1:3427209/1‑100 (MQ=255)

                                                                                        taCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATaa             >  2:1489350/1‑100 (MQ=255)

                                                                                          cacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACa           >  2:3084863/1‑100 (MQ=255)

                                                                                          cacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACa           >  1:1746174/1‑100 (MQ=255)

                                                                                          cacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACa           <  2:903582/100‑1 (MQ=255)

                                                                                                aGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTg     >  1:1947373/1‑100 (MQ=255)

                                                                                                 gcgcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGc    >  1:1083755/1‑100 (MQ=255)

TCGACGGTGGTGTCATTGTCCAGAAGGTAGAACGTCGCGTTTTTCATAAATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCT  >  NC_000913/4484234‑4484432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.