New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 437120 =NA (NA)12 (0.100) 10/162 NT NA noncoding (1/37 nt) REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 437153 = NA (NA)noncoding (34/37 nt) REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 159 total aligned reads displayed.

ATGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGT  >  NC_000913/437021‑437218
                                                                                                   |                                                                                                  
attgaacgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagg                                                                                                    <  1:219687‑M1/1‑1 (MQ=255)
attgaacgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagg                                                                                                    >  2:2876656‑M1/100‑100 (MQ=255)
aTGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATg                                                                                                    >  1:970811/1‑100 (MQ=255)
 ttgaacgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGc                                                                                                   >  2:2458644‑M1/99‑100 (MQ=255)
 tGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGc                                                                                                   >  1:686434/1‑100 (MQ=255)
 tGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGc                                                                                                   >  2:311856/1‑100 (MQ=255)
 tGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGc                                                                                                   >  2:1115116/1‑100 (MQ=255)
  tgaacgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGcc                                                                                                  <  2:1417398‑M1/3‑1 (MQ=255)
  gATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGcc                                                                                                  <  2:2885799/100‑1 (MQ=255)
  gATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGcc                                                                                                  <  2:1797264/100‑1 (MQ=255)
   gaacgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCt                                                                                                 <  1:2869043‑M1/4‑1 (MQ=255)
    tCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTg                                                                                                <  1:2702548/100‑1 (MQ=255)
      gacgaTATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGAt                                                                                              >  1:3082030/1‑100 (MQ=255)
      cgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGAt                                                                                              >  2:1162123‑M1/94‑100 (MQ=255)
      cgcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGAt                                                                                              <  1:2318298‑M1/7‑1 (MQ=255)
       gcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGAtg                                                                                             <  2:2845481‑M1/8‑1 (MQ=255)
       gcggtggatatcactttgaagccggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGAtg                                                                                             >  1:941604‑M1/93‑100 (MQ=255)
       acgaTATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGAtg                                                                                             <  1:2600714/100‑1 (MQ=255)
        cgaTATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGAtgt                                                                                            <  2:3623648/100‑1 (MQ=255)
          atatTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGa                                                                                          <  2:2761516/100‑1 (MQ=255)
            atTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACg                                                                                        >  1:475832/1‑100 (MQ=255)
            atTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACg                                                                                        <  1:3039801/100‑1 (MQ=255)
            atTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACg                                                                                        >  2:1891838/1‑100 (MQ=255)
            atTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACg                                                                                        <  2:1779518/100‑1 (MQ=255)
             ttGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGc                                                                                       <  2:1151107/100‑1 (MQ=255)
             ttGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGc                                                                                       <  2:1331027/100‑1 (MQ=255)
                 cGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGATGCTTGt                                                                                   <  1:3163795/100‑1 (MQ=255)
                  gCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTc                                                                                  >  2:231197/1‑100 (MQ=255)
                    cGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGt                                                                                   <  1:3037982/97‑1 (MQ=255)
                    cGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCAc                                                                                <  1:1062349/100‑1 (MQ=255)
                    cGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCAc                                                                                >  2:2688126/1‑100 (MQ=255)
                      gggTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGt                                                                              >  1:172402/1‑100 (MQ=255)
                      gggTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGt                                                                              >  1:579096/1‑100 (MQ=255)
                        gTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGtct                                                                            <  2:810924/100‑1 (MQ=255)
                          gATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGtctcc                                                                          >  2:3665970/1‑99 (MQ=255)
                          gATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtca                                                                          <  1:3496818/100‑1 (MQ=255)
                          gATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtca                                                                          >  1:1123033/1‑100 (MQ=255)
                           aTTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtcat                                                                         >  2:856984/1‑100 (MQ=255)
                            tttCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtcatc                                                                        <  1:2021662/100‑1 (MQ=255)
                            tttCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtcatc                                                                        <  2:3033250/100‑1 (MQ=255)
                             ttCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtcatca                                                                       <  1:997138/100‑1 (MQ=255)
                             ttCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtcatca                                                                       <  1:1104701/100‑1 (MQ=255)
                             ttCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCtcatca                                                                       <  1:2131991/100‑1 (MQ=255)
                             cggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCtcatca                                                                       >  2:3198963‑M1/71‑100 (MQ=255)
                              ggaacagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAg                                                                      >  2:3375712‑M1/70‑100 (MQ=255)
                               gaacagattgccgaactggaaactccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAgg                                                                     >  1:2787913‑M1/69‑100 (MQ=255)
                               ccGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAgg                                                                     >  1:70816/1‑100 (MQ=255)
                                 gCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                   <  2:839534/100‑1 (MQ=255)
                                 acagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                   >  2:948704‑M1/67‑100 (MQ=255)
                                 acagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                   >  2:2958309‑M1/67‑100 (MQ=255)
                                 acagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                   >  2:891148‑M1/67‑100 (MQ=255)
                                  cagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCt                                                                  >  2:2319183‑M1/66‑100 (MQ=255)
                                  cAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                   >  1:789181/1‑99 (MQ=255)
                                       aTCCTGTATTTTAGCGGTCATCACTGGCCGCTGGGCATTCTGTCGTATTTGTTCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTgggt                                                              <  1:1844141/99‑3 (MQ=255)
                                        tCCTGTATTTGATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGAGGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGActc                                                            <  1:3425513/100‑1 (MQ=255)
                                          cTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCtt                                                          >  1:3081374/1‑100 (MQ=255)
                                           tGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTa                                                         <  1:1124405/100‑1 (MQ=255)
                                               ttttATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTAtttg                                                     <  1:2886691/100‑2 (MQ=255)
                                                tttATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTa                                                     <  2:168134/99‑1 (MQ=255)
                                                ggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTaa                                                    <  1:2744352‑M1/49‑1 (MQ=255)
                                                  tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                  <  2:3467602/100‑1 (MQ=255)
                                                  tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                  <  2:1375933/100‑1 (MQ=255)
                                                  tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                  <  2:1938735/100‑1 (MQ=255)
                                                  tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                  <  2:2430613/100‑1 (MQ=255)
                                                  tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                  <  2:653228/100‑1 (MQ=255)
                                                   aacgccgtataagccgcatcctgtcgtagtatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATc                                                 >  1:131904‑M1/49‑100 (MQ=255)
                                                   aTCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATc                                                 <  2:2248691/100‑1 (MQ=255)
                                                      ggTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTa                                              >  1:22807/1‑100 (MQ=255)
                                                        tcatcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCATGCCTGGACTCTTATTTAAATCCTACg                                            <  1:1277442/100‑1 (MQ=255)
                                                        tcatcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACg                                            >  1:2346652/1‑100 (MQ=255)
                                                            caCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAg                                        >  2:787623/1‑100 (MQ=255)
                                                                ggCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATg                                    <  1:1592541/100‑1 (MQ=255)
                                                                 gCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGc                                   >  2:2779607/1‑100 (MQ=255)
                                                                 gCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGc                                   <  2:172404/100‑1 (MQ=255)
                                                                    gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                <  1:2435730/100‑1 (MQ=255)
                                                                    gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                <  1:2844916/100‑1 (MQ=255)
                                                                    gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                <  1:2081315/100‑1 (MQ=255)
                                                                    gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                >  2:417085/1‑100 (MQ=255)
                                                                     aaccgcatccTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGtt                               <  2:2721189/91‑1 (MQ=255)
                                                                      tGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGttt                              <  1:51834/100‑1 (MQ=255)
                                                                        ggTATTCTGTCGTAGTTGTGCACCGTTTCCTGATGTGACGCTTGTCACGTCTCATGAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTtat                            <  1:1657664/100‑1 (MQ=255)
                                                                        ggTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTtat                            <  2:686437/100‑1 (MQ=255)
                                                                         gTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTtata                           >  1:1537392/1‑100 (MQ=255)
                                                                           aTTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACg                         <  1:3691373/100‑1 (MQ=255)
                                                                                gTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGGCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCg                      >  1:601220/1‑98 (MQ=255)
                                                                                  cGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCATGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTc                  >  1:93491/1‑100 (MQ=255)
                                                                                  cGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTc                  <  2:1961054/100‑1 (MQ=255)
                                                                                   gTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTcc                 <  2:590791/100‑1 (MQ=255)
                                                                                    tAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCa                <  2:147050/100‑1 (MQ=255)
                                                                                     aGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAg               <  2:1231994/100‑1 (MQ=255)
                                                                                     aGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAg               >  2:1117395/1‑100 (MQ=255)
                                                                                     aGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAg               <  1:3706937/100‑1 (MQ=255)
                                                                                      gTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGt              >  1:2845462/1‑100 (MQ=255)
                                                                                        tgtgCACCGATTCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGCTGCGGTTTATACGGCGTTTCCAGTTc            >  1:2870964/1‑100 (MQ=255)
                                                                                        tgtgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTc            <  1:968311/100‑1 (MQ=255)
                                                                                          tgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCgg          >  2:61892/1‑100 (MQ=255)
                                                                                           gCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGc         >  1:1432322/1‑100 (MQ=255)
                                                                                           gCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGc         <  2:3249628/100‑1 (MQ=255)
                                                                                             aCCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCaa       <  1:426286/100‑1 (MQ=255)
                                                                                                  tGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGt  <  2:2611971/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
ATGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGT  >  NC_000913/437021‑437218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.