BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	437120 =	NA (NA)	12 (0.100)	10/162	NT	NA	noncoding (1/37 nt)	REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	437153 =	NA (NA)	12 (0.100)	10/162	NT	NA	noncoding (34/37 nt)	REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 163 total aligned reads displayed.

GCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATA  >  NC_000913/437054‑437252

gCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                                                     <  2:839534/100‑1 (MQ=255)

acagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                                                     >  2:891148‑M1/67‑100 (MQ=255)

acagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                                                     >  2:2958309‑M1/67‑100 (MQ=255)

 cAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCt                                                                                                    <  1:928147/100‑1 (MQ=255)

  aGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTg                                                                                                   <  1:1115110/100‑1 (MQ=255)

      aTCCTGTATTTTAGCGGTCATCACTGGCCGCTGGGCATTCTGTCGTATTTGTTCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTgggt                                                                                                <  1:1844141/99‑3 (MQ=255)

       tCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGActc                                                                                              >  1:97126/1‑100 (MQ=255)

         cTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCtt                                                                                            >  2:2469073/1‑100 (MQ=255)

         cTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCtt                                                                                            <  1:530369/100‑1 (MQ=255)

         cTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCtt                                                                                            >  1:3081374/1‑100 (MQ=255)

          tGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTa                                                                                           <  1:1124405/100‑1 (MQ=255)

          tGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTa                                                                                           >  2:1229160/1‑100 (MQ=255)

           gTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTAt                                                                                          >  2:1740880/1‑100 (MQ=255)

            tATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTAtt                                                                                         <  2:2303020/100‑1 (MQ=255)

            tATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTAtt                                                                                         <  1:2859668/100‑1 (MQ=255)

               tttATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTa                                                                                       <  2:168134/99‑1 (MQ=255)

               ggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTaa                                                                                      <  1:2744352‑M1/49‑1 (MQ=255)

                 tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                                                    <  2:1375933/100‑1 (MQ=255)

                 tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                                                    <  2:2430613/100‑1 (MQ=255)

                 tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                                                    <  2:3467602/100‑1 (MQ=255)

                  aacgccgtataagccgcatcctgtcgtagtatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATc                                                                                   >  1:131904‑M1/49‑100 (MQ=255)

                  aTCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATc                                                                                   <  2:2248691/100‑1 (MQ=255)

                     ggTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTa                                                                                >  1:22807/1‑100 (MQ=255)

                       tcatcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCATGCCTGGACTCTTATTTAAATCCTACg                                                                              <  1:1277442/100‑1 (MQ=255)

                       tcatcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACg                                                                              >  1:2346652/1‑100 (MQ=255)

                         atcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGan                                                                            <  1:139423/100‑2 (MQ=255)

                         atcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGAc                                                                            >  2:2660496/1‑100 (MQ=255)

                             cTGGCCGCTGGGTATTCTGTCGTAGTTGTGCATCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGa                                                                        <  1:770323/100‑1 (MQ=255)

                               ggCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATg                                                                      <  1:1592541/100‑1 (MQ=255)

                                gCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGc                                                                     >  2:2779607/1‑100 (MQ=255)

                                 ccGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCg                                                                    >  2:1909346/1‑100 (MQ=255)

                                 ccGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCg                                                                    >  1:2875149/1‑100 (MQ=255)

                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCTTTATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  1:3163322/100‑1 (MQ=255)

                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  1:2081315/100‑1 (MQ=255)

                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  1:2435730/100‑1 (MQ=255)

                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  1:1458138/100‑1 (MQ=255)

                                       ggTATTCTGTCGTAGTTGTGCACCGTTTCCTGATGTGACGCTTGTCACGTCTCATGAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTtat                                                              <  1:1657664/100‑1 (MQ=255)

                                       ggTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTtat                                                              <  2:686437/100‑1 (MQ=255)

                                           ttCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACg                                                           >  1:946679/1‑99 (MQ=255)

                                             cTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCg                                                        <  2:789185/100‑1 (MQ=255)

                                                 tttaaataagagtccaggcctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTc                                                    >  2:2744371‑M2/51‑100 (MQ=255)

                                                 cGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCATGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTc                                                    >  1:93491/1‑100 (MQ=255)

                                                 cGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTc                                                    <  2:1961054/100‑1 (MQ=255)

                                                    aGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAg                                                 <  1:3706937/100‑1 (MQ=255)

                                                    aGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAg                                                 >  2:1117395/1‑100 (MQ=255)

                                                     gTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGt                                                >  1:2845462/1‑100 (MQ=255)

                                                       tgtgCACCGATTCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGCTGCGGTTTATACGGCGTTTCCAGTTc                                              >  1:2870964/1‑100 (MQ=255)

                                                       tgtgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTc                                              <  1:231195/100‑1 (MQ=255)

                                                       tgtgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTc                                              >  2:649978/1‑100 (MQ=255)

                                                        gtgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCg                                             <  2:579098/100‑1 (MQ=255)

                                                         tgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCgg                                            >  2:3361311/1‑100 (MQ=255)

                                                         tgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCgg                                            >  2:61892/1‑100 (MQ=255)

                                                          gCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGc                                           >  1:1432322/1‑100 (MQ=255)

                                                          gCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGc                                           <  2:3248855/100‑1 (MQ=255)

                                                            gtccaggcctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCaa                                         >  1:2428605‑M2/40‑100 (MQ=255)

                                                            aCCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCaa                                         <  1:426286/100‑1 (MQ=255)

                                                               gATGCCTGATGTGACGCTTGGCACGTCTCAGCAGGCCTGGACTCTTATTTAAAGCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCt                                      <  1:323312/100‑1 (MQ=255)

                                                                aggcctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTg                                     >  2:2319183‑M2/36‑100 (MQ=255)

                                                                 tGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGt                                    <  2:2611971/100‑1 (MQ=255)

                                                                 ggcctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGt                                    >  2:948704‑M2/35‑100 (MQ=255)

                                                                   cctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGAGTTTCCAGTTCGGCAATCTGTTc                                  >  1:2787913‑M2/33‑100 (MQ=255)

                                                                   CCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTc                                  <  2:2869062‑M1/100‑1 (MQ=255)

                                                                   CCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTc                                  >  1:649975‑M1/1‑100 (MQ=255)

                                                                   CCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTc                                  >  2:140919‑M1/1‑100 (MQ=255)

                                                                    CTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTcc                                 >  1:1891828‑M1/1‑100 (MQ=255)

                                                                    CTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTcc                                 >  2:3448183‑M1/1‑100 (MQ=255)

                                                                     tgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCg                                >  2:3198963‑M2/31‑100 (MQ=255)

                                                                     TGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCg                                <  2:451361‑M1/100‑1 (MQ=255)

                                                                      GATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCgg                               >  2:2346666‑M1/1‑100 (MQ=255)

                                                                      GATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTAGGCAATCTGTTCCgg                               <  1:2889554‑M1/100‑1 (MQ=255)

                                                                       ATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGc                              >  2:1432327‑M1/1‑100 (MQ=255)

                                                                        TGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCt                             <  2:2059657‑M1/100‑1 (MQ=255)

                                                                        TGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCt                             >  1:62025‑M1/1‑100 (MQ=255)

                                                                          tgACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCtt                            <  1:469283/99‑1 (MQ=255)

                                                                           gACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCa                          <  1:2768475/100‑1 (MQ=255)

                                                                           gACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCa                          >  2:1450997/1‑100 (MQ=255)

                                                                           gACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCa                          >  1:569132/1‑100 (MQ=255)

                                                                           gACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCa                          <  2:922087/100‑1 (MQ=255)

                                                                              gCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAg                       <  1:1955557/100‑1 (MQ=255)

                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      <  1:213095/100‑1 (MQ=255)

                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      <  2:39309/100‑1 (MQ=255)

                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      >  2:1935921/1‑100 (MQ=255)

                                                                                ttGTCACGTCTCATCAGGCCTGGACTCTTATTTACATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTg                     <  1:2754091/100‑1 (MQ=255)

                                                                                 tGTCATGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGa                    <  2:93493/100‑1 (MQ=255)

                                                                                 tGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGa                    >  2:1830593/1‑100 (MQ=255)

                                                                                   tCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGata                  <  2:22808/100‑1 (MQ=255)

                                                                                     aCGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATc                >  2:3007952/1‑100 (MQ=255)

                                                                                      cGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATcc               >  1:1646536/1‑100 (MQ=255)

                                                                                      cGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATcc               <  2:2492729/100‑1 (MQ=255)

                                                                                      cGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATcc               <  1:3556526/100‑1 (MQ=255)

                                                                                        tctcATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCAc             <  2:2984536/100‑1 (MQ=255)

                                                                                         ctcATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCAcc            <  2:1692118/100‑1 (MQ=255)

                                                                                          tcatcaGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGTTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACcg           <  2:1252116/100‑1 (MQ=255)

                                                                                          tcatcaGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGTTTTTAAAGTGGCATCCACcg           <  1:1766251/100‑1 (MQ=255)

                                                                                           catcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACcgc          <  2:2845481‑M2/92‑1 (MQ=255)

                                                                                                ggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCa     >  1:3587344‑M2/4‑100 (MQ=255)

                                                                                                 gcCTGGAGTCTAATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCaa    >  1:1954452‑M2/3‑100 (MQ=255)

                                                                                                  cCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAAt   >  2:2876656‑M2/2‑100 (MQ=255)

                                                                                                  cCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAAt   <  1:219687‑M2/99‑1 (MQ=255)

                                                                                                   cTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATa  >  2:2721920/1‑100 (MQ=255)

GCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATA  >  NC_000913/437054‑437252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.