New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3680367 =NA (NA)6 (0.050) 5/162 NT NA noncoding (1/76 nt) REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3680397 = NA (NA)noncoding (31/76 nt) REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences REP265 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 200 total aligned reads displayed.

GTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGC  >  NC_000913/3680298‑3680494
                                                                                                   |                                                                                                 
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                   <  2:1256741/100‑1 (MQ=255)
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                   <  2:3635520/100‑1 (MQ=255)
gTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCt                                                                                                   <  1:3620192/100‑1 (MQ=255)
 gatattccacctgcacagtaatgcctgatggtgatgagttagcacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTc                                                                                                  >  1:20522‑M1/69‑100 (MQ=255)
  tATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTc                                                                                                  >  1:1787316/1‑99 (MQ=255)
  tATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCa                                                                                                 >  2:113275/1‑100 (MQ=255)
   aTTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCAt                                                                                                <  2:1553477/100‑1 (MQ=255)
     ttccacctgcacagtaatgcctgatggtgatgagttaggacaaccatcaggtatttatggatgaGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATcc                                                                                              >  1:2029291‑M1/65‑100 (MQ=255)
        gTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATa                                                                                           <  1:1090460/100‑1 (MQ=255)
          aTCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATaaa                                                                                         >  2:1314339/1‑100 (MQ=255)
            cgcgGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa                                                                                       <  2:862077/100‑1 (MQ=255)
            cgcgGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa                                                                                       <  2:3506567/100‑1 (MQ=255)
            cgcgGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATa                                                                                       >  2:337310/1‑100 (MQ=255)
             gcggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAc                                                                                      >  1:625752‑M1/1‑99 (MQ=255)
              cggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcc                                                                                     <  2:3143615‑M1/100‑3 (MQ=255)
              cggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcc                                                                                     <  1:2146690‑M1/100‑3 (MQ=255)
              cggcgCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcc                                                                                     <  1:58491‑M1/100‑3 (MQ=255)
                 cgcgAGTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATCAAGTGTTACCCCTCTATCCAGCTCATCCATAGATAcctg                                                                                   >  1:1172129‑M1/1‑95 (MQ=255)
                   cgATTATCCCGCGTGAGGCGAGGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatg                                                                                <  1:2596808‑M1/100‑8 (MQ=255)
                    gATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatgg                                                                               <  2:3345673‑M1/100‑9 (MQ=255)
                     aTTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatggt                                                                              <  1:337308‑M1/100‑10 (MQ=255)
                     aTTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatggt                                                                              >  1:1066535‑M1/1‑91 (MQ=255)
                       tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                            >  2:3240153/1‑100 (MQ=255)
                       tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                            >  1:2111999/1‑100 (MQ=255)
                       tATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtg                                                                            <  1:3211698/100‑1 (MQ=255)
                        aTCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTtgt                                                                           <  1:471672/100‑1 (MQ=255)
                          cccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGc                                                                         <  1:2740437/100‑1 (MQ=255)
                          cccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGc                                                                         <  2:2159357/100‑1 (MQ=255)
                          cccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGc                                                                         >  2:2762444/1‑100 (MQ=255)
                           ccGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCt                                                                        >  2:2880331/1‑100 (MQ=255)
                            cgcgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTa                                                                       <  2:2774357/100‑1 (MQ=255)
                            cgcgGGAGGCGATGCCCGCGTAAACGCAGCATATGCTAAAGGCTGGATAAAGTGTTACGCCTCTATCCAGCTCATCCATGAATACCTGATGGTTGTGCt                                                                        <  1:1147404/99‑1 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTaan                                                                     <  1:3511823/100‑2 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                     <  2:1978155/100‑1 (MQ=255)
                              cgTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAAc                                                                     <  2:2937869/100‑1 (MQ=255)
                               gTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACt                                                                    <  2:2865101/100‑1 (MQ=255)
                               gTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACt                                                                    <  1:402822/100‑1 (MQ=255)
                                   ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtcatc                                                                >  2:1448339/1‑100 (MQ=255)
                                   ggCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACtcatc                                                                <  1:2801786/100‑1 (MQ=255)
                                     cGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCAC                                                              >  1:2165201‑M2/1‑100 (MQ=255)
                                        tGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCAT                                                           <  2:2557351‑M2/100‑1 (MQ=255)
                                        tGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCAT                                                           >  2:786763‑M2/1‑100 (MQ=255)
                                          ccAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatggtgatgagttagcacaaccatca                                                         <  2:44034‑M1/100‑31 (MQ=255)
                                          ccAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCA                                                         <  2:2835933‑M2/100‑1 (MQ=255)
                                           cAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAG                                                        <  1:1630084‑M2/100‑1 (MQ=255)
                                           cAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAG                                                        >  2:559479‑M2/1‑100 (MQ=255)
                                           cAGCATATACGCAGCATATGCAAAAGGCTGGATAATGTGTTATCCCTCTATCCAGCTCATCCATTAATACCTGATGGTTGTGCTAACTCATCACCATC                                                          >  1:778586‑M2/1‑98 (MQ=255)
                                             gCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatggtgatgagttagcacaaccatcaggt                                                      <  1:173752‑M1/100‑34 (MQ=255)
                                             gCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGc                                                      <  2:2481229/100‑1 (MQ=255)
                                             gCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGc                                                      <  1:980221/100‑1 (MQ=255)
                                              cGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCa                                                     >  2:940914/1‑100 (MQ=255)
                                               gTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCAt                                                    <  1:1296059/100‑1 (MQ=255)
                                                tAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATAcctgatggtgatgagttagcacaaccatcaggtatt                                                   <  1:1258537‑M1/100‑37 (MQ=255)
                                                   aCGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACt                                                >  2:2207777/1‑100 (MQ=255)
                                                    cGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACtg                                               >  2:2270342/1‑100 (MQ=255)
                                                       agcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGc                                            >  2:3588984/1‑100 (MQ=255)
                                                       agcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGc                                            <  1:1568712/100‑1 (MQ=255)
                                                       agcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGc                                            <  1:1437769/100‑1 (MQ=255)
                                                       agcaTATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGc                                            <  2:2724874/100‑1 (MQ=255)
                                                          atatGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCCGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAgg                                         <  2:565331/100‑1 (MQ=255)
                                                           tatGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGt                                        >  2:3115748/1‑100 (MQ=255)
                                                            atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                       <  2:593032/100‑1 (MQ=255)
                                                            atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                       <  2:1694472/100‑1 (MQ=255)
                                                            atGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTg                                       >  1:3263651/1‑100 (MQ=255)
                                                             tgccacgggCTGGATAAAGTGTTACCCCTCTACCCAGCTCATCCATAAATCCCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACGGTGCAGGTg                                       <  1:1373417/92‑1 (MQ=255)
                                                             tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                      <  1:2880312/100‑1 (MQ=255)
                                                             tGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTgg                                      >  1:838769/1‑100 (MQ=255)
                                                              gCAAAAGGNTGGATAAAGTGTTACCCNTCTANCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCNGGTGGa                                     >  2:3445526/1‑100 (MQ=255)
                                                              gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCCTTACTGTGCAGGTGGa                                     >  1:3537691/1‑100 (MQ=255)
                                                              gCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGa                                     >  2:653721/1‑100 (MQ=255)
                                                               cAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGaa                                    <  1:2270331/100‑1 (MQ=255)
                                                                gatgagctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAat                                   >  2:2402464‑M2/36‑100 (MQ=255)
                                                                    agctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATcc                               >  1:2835216‑M2/32‑100 (MQ=255)
                                                                    agctggatagaggggtaacactttatccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATcc                               >  1:174888‑M2/32‑100 (MQ=255)
                                                                     GCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCg                              <  2:136567‑M1/100‑1 (MQ=255)
                                                                      CTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGt                             >  1:3456032‑M1/1‑100 (MQ=255)
                                                                       TGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTc                            <  2:2095299‑M1/100‑1 (MQ=255)
                                                                        GGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCa                           <  2:3043257‑M1/100‑1 (MQ=255)
                                                                         GATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCAc                          <  2:328455‑M1/100‑1 (MQ=255)
                                                                         GATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCAc                          <  2:1826749‑M1/100‑1 (MQ=255)
                                                                             acgtgtGACCCCTCGATCCAGCGCATCCATAAATACCTGAGGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAAGATCCGTCACTTc                       <  1:2669142/97‑1 (MQ=255)
                                                                             aaGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCa                      >  1:2845599/1‑100 (MQ=255)
                                                                             aaGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCa                      >  1:23626/1‑100 (MQ=255)
                                                                             aaGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCa                      >  2:2661626/1‑100 (MQ=255)
                                                                              aGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAg                     <  2:1066541/100‑1 (MQ=255)
                                                                              aGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAg                     <  1:3427473/100‑1 (MQ=255)
                                                                              aGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAg                     <  2:2112010/100‑1 (MQ=255)
                                                                                 gtTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGAt                  <  1:2560142/100‑1 (MQ=255)
                                                                                   tACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCAcagatcggaag                >  2:1233481/1‑90 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg             >  1:523611/1‑100 (MQ=255)
                                                                                      cccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACg             <  2:1253210/100‑1 (MQ=255)
                                                                                       ccTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGt            >  1:1053982/1‑100 (MQ=255)
                                                                                            atccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATcc       >  2:3187739‑M2/8‑100 (MQ=255)
                                                                                              ccagcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCg      >  1:1216781‑M2/6‑99 (MQ=255)
                                                                                                agcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTgg   <  1:3275806‑M2/97‑1 (MQ=255)
                                                                                                agcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTgg   >  2:2147159‑M2/4‑100 (MQ=255)
                                                                                                agcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTgg   >  2:1639297‑M2/4‑100 (MQ=255)
                                                                                                agcGCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCACCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTgg   <  2:2398895‑M2/97‑1 (MQ=255)
                                                                                                 gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGc  <  2:67725‑M2/98‑1 (MQ=255)
                                                                                                 gcTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGc  <  2:759932‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
GTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAAACGCAGCATATGCAAAAGGCTGGATAAAGTGTTACCCCTCTATCCAGCTCATCCATAAATACCTGATGGTTGTGCTAACTCATCACCATCAGGCATTACTGTGCAGGTGGAATATCCGTCACTTCAGGATGTACGTCATCCGTGGC  >  NC_000913/3680298‑3680494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.