| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 399026 | NA (NA) | 12 (0.120) | 10/164 | NT | NA | coding (308/309 nt) | yaiY | DUF2755 family inner membrane protein |
| ? | NC_000913 | = 399047 | NA (NA) | coding (287/309 nt) | yaiY | DUF2755 family inner membrane protein | |||||
GCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/398929‑399026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCCCG < NC_000913/399047‑398943 GCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTAC > 2:181026/1‑100GCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTAC > 1:2296481/1‑100 GACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCG > 2:1546370/1‑100 GACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGATTCAGGCCGCATCTGACAATGTAAAACTTACTGGCG > 2:1716926/1‑100 CGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCG < 2:1205404/100‑1 GGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCC < 1:2101811/100‑1 CGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAG < 1:412456/100‑1 CGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAG < 1:1227361/100‑1 ggGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAGT < 2:1326197/98‑1 GCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAGT < 2:2220746/100‑1 CGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAGTA < 1:1732528/100‑1 AAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGAGTTTTACATTGTCAGATGC > 1:1781819/1‑100 CGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGA > 1:937654/1‑100 GGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCT > 1:339377/1‑100 CTGACAATGTAAAACTTACTGGCGGC‑GATGTCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATC > 1:2210229/1‑100 AAACTTACTGGCGGCGAT‑GTCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATA > 1:2994201/1‑100 CTGGCGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCG > 1:952969/1‑100 TGGCGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGC < 1:2592155/100‑1 GGCGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCC > 1:396166/1‑100 GCGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCCC < 1:1916080/100‑1 CGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCCCG < 2:736628/100‑1 CGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCCCG > 2:1281867/1‑100 CGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCCCG > 1:398154/1‑100 GCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/398929‑399026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCGAC‑ATCGCCGCCAGTAAGTTTTACATTGTCAGATGCGGCCTGAAACGCCTTATCTGGCCTGACATTCCTGTTTGATCACTGTTTCATACAACGCGCCCG < NC_000913/399047‑398943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |