New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 399026NA (NA)12 (0.120) 10/164 NT NA coding (308/309 nt) yaiY DUF2755 family inner membrane protein
?NC_000913 = 399047 NA (NA)coding (287/309 nt) yaiY DUF2755 family inner membrane protein

Only 100 of 148 total aligned reads displayed.

CGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCACCCGTGGGC  >  NC_000913/398949‑399146
                                                                                                   |                                                                                                   
cgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTg                                                                                                    >  2:2804911/1‑100 (MQ=255)
cgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTg                                                                                                    >  2:721926/1‑100 (MQ=255)
 gTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGc                                                                                                   >  1:1464885/1‑100 (MQ=255)
   tGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAg                                                                                                 <  1:721928/100‑1 (MQ=255)
   tGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAg                                                                                                 >  1:1606335/1‑100 (MQ=255)
    gTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGc                                                                                                >  2:1299819/1‑100 (MQ=255)
    gTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGc                                                                                                >  1:627349/1‑100 (MQ=255)
     tATGCAACAGTGATCAACCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGcc                                                                                               <  1:2479213/100‑1 (MQ=255)
     tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGcc                                                                                               <  1:2361515/100‑1 (MQ=255)
     tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGcc                                                                                               >  2:2749320/1‑100 (MQ=255)
     tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGcc                                                                                               >  2:843245/1‑100 (MQ=255)
     tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAGTaagttt                                                                                               >  1:2994201‑M2/1‑94 (MQ=255)
      aTGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCa                                                                                              <  1:627925/100‑1 (MQ=255)
         aaaCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAg                                                                                           >  1:277342/1‑100 (MQ=255)
          aaCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAgc                                                                                          >  1:403579/1‑100 (MQ=255)
          aaCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAgc                                                                                          >  2:1169789/1‑100 (MQ=255)
            cAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAgcgc                                                                                        >  1:2786705/1‑100 (MQ=255)
             ggTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGcc                                                                                       >  1:2954656/2‑100 (MQ=255)
             aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGcc                                                                                       <  2:1409729/100‑1 (MQ=255)
              gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGcca                                                                                      >  2:2792550/1‑100 (MQ=255)
              gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGcca                                                                                      >  2:2194957/1‑100 (MQ=255)
              gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGcca                                                                                      <  1:2744068/100‑1 (MQ=255)
              gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGcca                                                                                      >  1:2516647/1‑100 (MQ=255)
               tGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGccac                                                                                     <  1:2755932/100‑1 (MQ=255)
                gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGccacc                                                                                    <  1:843246/100‑1 (MQ=255)
                gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGACATC‑GCCGCCAGTaagttttacattgtcag                                                                                    >  1:2210229‑M2/1‑83 (MQ=255)
                 aTCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGccacca                                                                                   >  2:1571162/1‑100 (MQ=255)
                  tCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCcaccac                                                                                  >  1:1556771/1‑100 (MQ=255)
                       cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCaa                                                                             <  1:861712/100‑1 (MQ=255)
                        aGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAGTaagttttacattgtcagatgcggcc                                                                            >  1:339377‑M2/1‑75 (MQ=255)
                            aTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATg                                                                        <  2:1972721/100‑1 (MQ=255)
                              ntCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAg                                                                      >  2:1465888/2‑100 (MQ=255)
                               tCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGAC‑ATCGCCGCCAGTaagttttacattgtcagatgcggcctgaaacg                                                                     >  1:937654‑M2/1‑68 (MQ=255)
                                cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc                                                                    >  1:1442821/1‑100 (MQ=255)
                                cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGc                                                                    >  1:294083/1‑100 (MQ=255)
                                 aGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTAGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGACGCa                                                                   >  2:774223/1‑100 (MQ=255)
                                  ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAGTGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAGAATGAGGCAg                                                                  >  2:2045701/1‑100 (MQ=255)
                                  ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg                                                                  >  1:2582210/1‑100 (MQ=255)
                                  ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg                                                                  >  1:2465741/1‑100 (MQ=255)
                                  ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg                                                                  >  1:2036362/1‑100 (MQ=255)
                                   gCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc                                                                 >  2:1252743/1‑100 (MQ=255)
                                       gATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac                                                             >  2:2778821/1‑100 (MQ=255)
                                       gATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac                                                             <  2:2592130/100‑1 (MQ=255)
                                       gATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac                                                             <  2:716992/100‑1 (MQ=255)
                                        aTAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctact                                                            >  2:2196215/1‑100 (MQ=255)
                                         tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGTGGCGAT‑GTCGCCAGTGCAGCTATAGCGCCACCACTGCAAAAATGAGGCAGCctacta                                                           <  2:3097567/100‑1 (MQ=255)
                                         tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctacta                                                           >  2:3032793/1‑100 (MQ=255)
                                         tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctacta                                                           >  1:2652157/1‑100 (MQ=255)
                                              cGTTTCAGGCCGCATCTGACAAAGTAAAACTTACTGGCGGCACT‑GTCGCCAGTGATTCCATAGCGCCCCCAATGCAAAACGGAGGCAGCCGCATAAAAAc                                                      >  2:1593519/1‑100 (MQ=255)
                                                  tCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGa                                                  <  1:1656274/100‑1 (MQ=255)
                                                   cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGAt                                                 <  1:1789395/100‑1 (MQ=255)
                                                   cAGGCAGCATCTGACAATGTAAAACTTACTGGCGGCGAG‑GTAGCCAGTGCAGCTATAGCGCCACAACTGCAAAAATGAGGCAGCCTACTAAAAACggaa                                                  <  2:2628078/99‑3 (MQ=255)
                                                    aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                                                >  2:391829/1‑100 (MQ=255)
                                                    aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                                                <  1:1526407/100‑1 (MQ=255)
                                                    aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                                                <  1:1319327/100‑1 (MQ=255)
                                                     ggCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCa                                               >  1:2924950/1‑100 (MQ=255)
                                                      gCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAg                                              >  1:1019353/1‑100 (MQ=255)
                                                        cGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGcc                                            <  2:1124327/100‑1 (MQ=255)
                                                         gCATCTGACAATGTAAAACTCACTGGCGAC‑ATCGCCGCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgttt                                           >  1:1781819‑M2/1‑42 (MQ=255)
                                                         gCATCTGACAAGGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGATGCAGCCTACTAAAAACGGGATCAGccc                                           <  2:2148330/100‑1 (MQ=255)
                                                            tCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaa                                        >  2:646500/1‑100 (MQ=255)
                                                             cTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaa                                       >  2:2384856/1‑100 (MQ=255)
                                                             cTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaa                                       >  2:2337999/1‑100 (MQ=255)
                                                                 cAATGTAAAACTTACTGGCGGCGAT‑GTAGCCAGGGCAGCCAGAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATgg                                   <  2:284308/100‑1 (MQ=255)
                                                                  aaTGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGt                                  <  2:2516622/100‑1 (MQ=255)
                                                                   aTGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTg                                 <  1:1299828/100‑1 (MQ=255)
                                                                    tGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGTAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGc                                <  1:2194977/100‑1 (MQ=255)
                                                                    tGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGc                                >  2:1966442/1‑100 (MQ=255)
                                                                     gTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATggagat                               >  1:954737/1‑96 (MQ=255)
                                                                     gTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGcc                               <  2:2506451/100‑1 (MQ=255)
                                                                       aaaaCTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAACACGGGATCAGCCCGAAAATGGTGCCGa                             >  2:711798/1‑100 (MQ=255)
                                                                        aaaCTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGac                            <  1:223883/100‑1 (MQ=255)
                                                                          aCTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGaca                           <  2:1795757/99‑1 (MQ=255)
                                                                           cTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGacacn                         <  2:2924921/100‑2 (MQ=255)
                                                                            ttACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCt                        >  1:3028834/1‑100 (MQ=255)
                                                                              aCTGGCGGCGAT‑GTCGCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcatacaacgc                      <  2:2220746‑M2/100‑80 (MQ=255)
                                                                               ntGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTaaa                     >  2:28739/2‑100 (MQ=255)
                                                                               cTGGCGGCGAT‑GTCGCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcatacaacgcg                     <  1:1227361‑M2/100‑81 (MQ=255)
                                                                                tGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAAc                    <  1:941591/100‑1 (MQ=255)
                                                                                 ggcggcGAT‑GTCGCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcatacaacgcgcc                   <  1:2101811‑M2/100‑83 (MQ=255)
                                                                                 ggcggcGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAAcc                   >  1:1939939/1‑100 (MQ=255)
                                                                                   cggcgAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCaa                 <  1:1334965/100‑1 (MQ=255)
                                                                                      cgAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAAttt              >  1:2157287/1‑100 (MQ=255)
                                                                                      cgAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAAtt               <  2:92216/99‑1 (MQ=255)
                                                                                        aT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTcc            <  1:2592138/100‑1 (MQ=255)
                                                                                         t‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCa           >  1:53301/1‑100 (MQ=255)
                                                                                            tCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAcc         <  2:627348/100‑1 (MQ=255)
                                                                                             cGCCAGTaagttttacattgtcagatgcggcctgaatcgccttatctggcctgacattcctgtttgatcactgtttcatacaacgcgcccgccgttcgtc        >  2:1716926‑M2/1‑7 (MQ=255)
                                                                                             cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAccc        >  2:173017/1‑100 (MQ=255)
                                                                                             cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAccc        >  1:2018138/1‑100 (MQ=255)
                                                                                             cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAccc        >  1:2939447/1‑100 (MQ=255)
                                                                                             cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAccc        >  2:1640149/1‑100 (MQ=255)
                                                                                             cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAcc         >  1:386270/1‑99 (MQ=255)
                                                                                             cGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGAACAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCAccc        >  1:50946/1‑100 (MQ=255)
                                                                                              gCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCACCCg       <  2:1556759/100‑1 (MQ=255)
                                                                                                 aGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTGCCACCCGTg     <  2:1378591/99‑1 (MQ=255)
                                                                                                  gTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcatacaacgcgcccgccgttcgtctacgc   >  1:2296481‑M2/1‑2 (MQ=255)
                                                                                                  gTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcatacaacgcgcccgccgttcgtctacgc   >  2:181026‑M2/1‑2 (MQ=255)
                                                                                                   tGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCACCCGTGGGc  >  1:686641/1‑100 (MQ=255)
                                                                                                   tGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCACCCGTGGGc  <  2:1464874/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAT‑GTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTAAACCAATTTCCACCCGTGGGC  >  NC_000913/398949‑399146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.