New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 399026NA (NA)12 (0.120) 10/164 NT NA coding (308/309 nt) yaiY DUF2755 family inner membrane protein
?NC_000913 = 399047 NA (NA)coding (287/309 nt) yaiY DUF2755 family inner membrane protein

Only 100 of 137 total aligned reads displayed.

GCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTA  >  NC_000913/398929‑399125
                                                                                                 |                                                                                                    
gcgTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTac                                                                                                    >  1:2296481‑M1/1‑98 (MQ=255)
gcgTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTac                                                                                                    >  2:181026‑M1/1‑98 (MQ=255)
     gACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg                                                                                               >  2:1546370‑M1/1‑93 (MQ=255)
     gACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGATTCAGGCCGCATCTGACAATGTAAAACTTactggcg                                                                                               >  2:1716926‑M1/1‑93 (MQ=255)
       cGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTggcggc                                                                                             >  1:1026560/1‑100 (MQ=255)
          aaggcgggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGAt                                                                                          >  1:2880466/3‑100 (MQ=255)
           cggcggGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcgacatcg                                                                                         <  2:1205404‑M1/100‑14 (MQ=255)
           cggcggGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg                                                                                        <  2:1879966/100‑1 (MQ=255)
           cggcggGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg                                                                                        <  2:1371853/100‑1 (MQ=255)
            ggcgggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGt                                                                                       <  1:3040689/100‑1 (MQ=255)
              cgggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG                                                                                     >  2:1281867‑M2/1‑100 (MQ=255)
              cgggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG                                                                                     >  1:398154‑M2/1‑100 (MQ=255)
              cgggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG                                                                                     <  2:736628‑M2/100‑1 (MQ=255)
               gggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGC                                                                                    <  1:1916080‑M2/100‑1 (MQ=255)
                ggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcgacatcgccgcc                                                                                    <  1:2101811‑M1/100‑19 (MQ=255)
                ggcgCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCC                                                                                   >  1:396166‑M2/1‑100 (MQ=255)
                 gcgcGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCA                                                                                  <  1:2592155‑M2/100‑1 (MQ=255)
                  cgcgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcgacatcgccgccag                                                                                  <  1:1227361‑M1/100‑21 (MQ=255)
                  cgcgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcgacatcgccgccag                                                                                  <  1:412456‑M1/100‑21 (MQ=255)
                  cgcgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG                                                                                 >  1:952969‑M2/1‑100 (MQ=255)
                   gggttGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcgacatcgccgccagt                                                                                 <  2:1326197‑M1/98‑22 (MQ=255)
                    cgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg                                                                               >  2:2804911/1‑100 (MQ=255)
                    cgTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg                                                                               >  2:721926/1‑100 (MQ=255)
                     gTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGc                                                                              >  1:1464885/1‑100 (MQ=255)
                     gTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGc                                                                              <  2:1905443/100‑1 (MQ=255)
                       tGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg                                                                            <  1:721928/100‑1 (MQ=255)
                       tGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg                                                                            >  1:1606335/1‑100 (MQ=255)
                        gTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc                                                                           >  1:627349/1‑100 (MQ=255)
                         tATGCAACAGTGATCAACCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGcc                                                                          <  1:2479213/100‑1 (MQ=255)
                         tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGcc                                                                          >  2:843245/1‑100 (MQ=255)
                         tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGcc                                                                          >  2:2749320/1‑100 (MQ=255)
                         tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGcc                                                                          <  1:2361515/100‑1 (MQ=255)
                         tATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGACATCGCCGCCAGTaagttt                                                                          >  1:2994201‑M2/1‑94 (MQ=255)
                          aTGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCa                                                                         >  1:1418038/1‑100 (MQ=255)
                          aTGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCa                                                                         <  1:627925/100‑1 (MQ=255)
                          aTGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCa                                                                         >  1:2399003/1‑100 (MQ=255)
                             aaaCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg                                                                      >  1:278415/1‑100 (MQ=255)
                                cAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcgc                                                                   >  1:2786705/1‑100 (MQ=255)
                                 ggTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc                                                                  >  1:2954656/2‑100 (MQ=255)
                                 aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc                                                                  <  2:1409729/100‑1 (MQ=255)
                                 aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc                                                                  >  2:1789380/1‑100 (MQ=255)
                                 aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCAcc                                                                  <  1:1311706/100‑1 (MQ=255)
                                  gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcca                                                                 >  2:2792550/1‑100 (MQ=255)
                                  gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcca                                                                 >  2:2194957/1‑100 (MQ=255)
                                  gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcca                                                                 <  1:2744068/100‑1 (MQ=255)
                                  gTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcca                                                                 >  1:2516647/1‑100 (MQ=255)
                                   tGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccac                                                                <  1:2755932/100‑1 (MQ=255)
                                   tGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccac                                                                >  2:2788793/1‑100 (MQ=255)
                                    gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccacc                                                               <  1:843246/100‑1 (MQ=255)
                                    gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGACATCGCCGCCAGTaagttttacattgtcag                                                               >  1:2210229‑M2/1‑83 (MQ=255)
                                     aTCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGccacca                                                              >  2:1571162/1‑100 (MQ=255)
                                       cAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCAGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt                                                            >  2:1656260/1‑100 (MQ=255)
                                        aaaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcggcgatgtcgccagtgagttttacattgtcagatgc                                                            >  1:1781819‑M1/1‑58 (MQ=255)
                                          aCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGACACATCTGACAAAGTAAAACTTACTGGCAGCGATGTCGCCAGTGCAGCCAGAGAGCcaccac                                                             >  2:2466928/1‑96 (MQ=255)
                                              gcaTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaaaaa                                                     <  1:2512870/98‑1 (MQ=255)
                                                aTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATg                                                   <  2:1972721/100‑1 (MQ=255)
                                                  gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAg                                                 <  1:1505791/100‑1 (MQ=255)
                                                   tCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGACATCGCCGCCAGTaagttttacattgtcagatgcggcctgaaacg                                                >  1:937654‑M2/1‑68 (MQ=255)
                                                   tCAGGCCAGATAAGGCGGTTCAGGCCTCAGCTGACAATGTAAAACTCACTGGCAGCGATGACGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAg                                                 <  2:837718/99‑1 (MQ=255)
                                                      ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg                                             >  1:2036362/1‑100 (MQ=255)
                                                      ggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAg                                             <  2:1017806/100‑1 (MQ=255)
                                                       gCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc                                            >  2:1252743/1‑100 (MQ=255)
                                                       accAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc                                            >  1:2138062/2‑100 (MQ=255)
                                                           gATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac                                        <  2:2592130/100‑1 (MQ=255)
                                                            aTAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctact                                       >  2:2196215/1‑100 (MQ=255)
                                                             tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGTGGCGATGTCGCCAGTGCAGCTATAGCGCCACCACTGCAAAAATGAGGCAGCctacta                                      <  2:3097567/100‑1 (MQ=255)
                                                             tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctacta                                      >  1:2652157/1‑100 (MQ=255)
                                                             tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctacta                                      >  2:3032793/1‑100 (MQ=255)
                                                              aaGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa                                     >  1:202587/1‑100 (MQ=255)
                                                                  cGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcggcgatgtcgccagtaagttttacattgtcagatgcggcctgaaacgccttatctggcctga                                  >  1:937654‑M1/1‑32 (MQ=255)
                                                                      tCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGa                             <  1:1656274/100‑1 (MQ=255)
                                                                        aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                           >  2:391829/1‑100 (MQ=255)
                                                                        aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                           <  1:1526407/100‑1 (MQ=255)
                                                                        aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                           <  2:676281/100‑1 (MQ=255)
                                                                        aGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATc                           <  1:1319327/100‑1 (MQ=255)
                                                                         ggCCGCATCTGACAATGTAAAACTTactggcggcgatgtcgccagtaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcct                           >  1:339377‑M1/1‑25 (MQ=255)
                                                                         ggCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCa                          >  1:2924950/1‑100 (MQ=255)
                                                                          gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAg                         >  1:1019353/1‑100 (MQ=255)
                                                                            cGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGcc                       <  2:1124327/100‑1 (MQ=255)
                                                                             gCATCTGACAATGTAAAACTCACTGGCGACATCGCCGCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgttt                      >  1:1781819‑M2/1‑42 (MQ=255)
                                                                             gCATCTGACAAGGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGATGCAGCCTACTAAAAACGGGATCAGccc                      <  2:2148330/100‑1 (MQ=255)
                                                                               aTCTGACAATGTAAAACTTACTGGAGGAGATGTCGACAGTGCAGCCATAGAGAAAAAAAAAAAAAAATGAGGCAGCCTACTAAAAACGGGATCa                          <  2:273750/94‑1 (MQ=255)
                                                                                tCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaa                   >  2:646500/1‑100 (MQ=255)
                                                                                 cTGACAATGTAAAACTTactggcggcgatgtcgccagtaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatc                   >  1:2210229‑M1/1‑17 (MQ=255)
                                                                                 cTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaa                  >  2:2384856/1‑100 (MQ=255)
                                                                                 cTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaa                  >  2:2337999/1‑100 (MQ=255)
                                                                                  tGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaaa                 >  2:2544081/1‑100 (MQ=255)
                                                                                  tGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGaaaa                 >  1:2931673/1‑100 (MQ=255)
                                                                                   gACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAAt                <  1:829830/100‑1 (MQ=255)
                                                                                    aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATg               <  1:2203728/100‑1 (MQ=255)
                                                                                    aCAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATg               <  2:71865/100‑1 (MQ=255)
                                                                                     cAATGTAAAACTTACTGGCGGCGATGTAGCCAGGGCAGCCAGAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATgg              <  2:284308/100‑1 (MQ=255)
                                                                                      aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGt             <  2:2516622/100‑1 (MQ=255)
                                                                                        tGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGc           >  2:1966442/1‑100 (MQ=255)
                                                                                           aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAACACGGGATCAGCCCGAAAATGGTGCCGa        >  2:711798/1‑100 (MQ=255)
                                                                                            aaaCTTactggcggcgatgtcgccagtaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcata        >  1:2994201‑M1/1‑6 (MQ=255)
                                                                                             aaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGaca      <  1:2625988/100‑1 (MQ=255)
                                                                                               cTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGacac   <  2:2924921/100‑2 (MQ=255)
                                                                                                ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCt   >  1:3028834/1‑100 (MQ=255)
                                                                                                 tACTGGCGGCGATGTCGCCAGTaagttttacattgtcagatgcggcctgaaacgccttatctggcctgacattcctgtttgatcactgtttcatacaacg  <  1:1732528‑M2/100‑79 (MQ=255)
                                                                                                 |                                                                                                    
GCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAACGGGATCAGCCCGAAAATGGTGCCGACACCTA  >  NC_000913/398929‑399125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.