| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 734637 = | 41 (0.380) | 7 (0.070) | 6/164 | NT | 15.6% | pseudogene (505/1521 nt) | rhsO | pseudogene, Rhs family |
| ? | NC_000913 | 734715 = | NA (NA) | pseudogene (583/1521 nt) | rhsO | pseudogene, Rhs family | |||||
Only 100 of 105 total aligned reads displayed.
TGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGC > NC_000913/734538‑734736 | tgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 2:2571694‑M1/1‑1 (MQ=255)tgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 1:614559‑M1/1‑1 (MQ=255)tgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg > 1:2380363‑M1/100‑100 (MQ=255) gccagccagcggcggctttcctcactcagccggtcagccaggatgtcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGc < 2:394256‑M1/2‑1 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGc < 1:2936329‑M1/2‑1 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccagtcgagcatctgcaccagcaccggcgggaacaccacactg < 1:2123571‑M1/1‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgct > 2:2889698‑M1/98‑99 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgag < 1:1454582‑M1/3‑3 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc > 2:1614752‑M1/98‑100 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc < 2:1251313‑M1/3‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc < 2:1227214‑M1/3‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc < 1:747005‑M1/3‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc > 1:522580‑M1/98‑100 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc > 1:32682‑M1/98‑100 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc < 1:265717‑M1/3‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc < 1:1410639‑M1/3‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGcc < 1:1252565‑M1/3‑1 (MQ=255) cggccagcggcgggtttcctcactcacccggtcagccaggatatcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCa < 1:2104567‑M1/4‑1 (MQ=255) cagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCa < 2:2985448‑M1/4‑1 (MQ=255) cagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCa < 2:592472‑M1/4‑1 (MQ=255) cagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCa < 2:2032921‑M1/4‑1 (MQ=255) cagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCa < 2:1521885‑M1/4‑1 (MQ=255) cagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggccgagcatctgcaccagcaccggcgggaacaccgcactGCCa < 2:65403‑M1/4‑1 (MQ=255) agccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 1:722500‑M1/96‑100 (MQ=255) agccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 1:604636‑M1/96‑100 (MQ=255) agccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 2:309314‑M1/96‑100 (MQ=255) agccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 2:446542‑M1/96‑100 (MQ=255) agccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 1:1864119‑M1/96‑100 (MQ=255) agccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 2:568489‑M1/96‑100 (MQ=255) gccagcggcggctttcctcactcacccggtcagccatgatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAc > 2:1755087‑M1/95‑99 (MQ=255) gccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggtgggaacaccacactGCCAcc > 2:1902439‑M1/95‑100 (MQ=255) gccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAcc < 1:117728‑M1/6‑1 (MQ=255) gccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAcc < 1:1696139‑M1/6‑1 (MQ=255) gccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCAcc < 1:2928262‑M1/6‑1 (MQ=255) gccagcagcggctttcctcactcacccggtcagccaggatttcactttccagccggtggagcatctgcaccagcaccggcgggaacaccacactGCCAcc < 1:1437489‑M1/6‑1 (MQ=255) ccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCACCg > 1:3080621‑M1/94‑100 (MQ=255) ccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCACCg > 2:2775302‑M1/94‑100 (MQ=255) ccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCACCg > 1:3025593‑M1/94‑100 (MQ=255) ccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactGCCACCg < 2:789706‑M1/7‑1 (MQ=255) ccGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCcggcg < 1:2911578/100‑1 (MQ=31) ggggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCggcggc > 1:2995485/1‑100 (MQ=32) ggggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCggcggc < 1:2402814/100‑1 (MQ=32) gcatctgcaccagcaccggcgggaacaccacactGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCggcggc > 1:2470774‑M1/35‑100 (MQ=255) gggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGgcggcg < 2:3070625/100‑1 (MQ=32) gggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGgcggcg > 2:211004/1‑100 (MQ=32) ggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCggcggcag > 1:913238/1‑98 (MQ=18) ggAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGgcggcg < 2:740612/99‑1 (MQ=32) gAGCTTCACGCCACTCATCAGGGTTGAAACCGTCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGgcggcg < 2:566445/98‑1 (MQ=17) gAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGaa > 1:789708/1‑100 (MQ=33) aGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAg < 2:1600709/100‑1 (MQ=33) gCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGaa > 1:26078/1‑98 (MQ=33) gCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAg < 2:1680797/99‑1 (MQ=33) gCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGa > 2:1064639/1‑100 (MQ=33) gCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGa > 1:1005075/1‑100 (MQ=33) ctcttccgatcTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGAc < 2:872288/90‑1 (MQ=255) cTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGAc > 1:2398994/1‑100 (MQ=33) tCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACgg > 2:81964/1‑100 (MQ=33) gcaccggcgggaacaccacactGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGc > 1:1229081‑M1/23‑100 (MQ=255) ccACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGTCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCa > 1:346740/1‑100 (MQ=18) ccACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCa > 2:137268/1‑100 (MQ=33) ccACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCa < 2:2328072/100‑1 (MQ=33) caccggcgggaacaccacactGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCa > 2:1557267‑M1/22‑100 (MQ=255) cACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAg < 2:336311/100‑1 (MQ=33) cACTCAGCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAg < 1:1132791/100‑1 (MQ=17) accggcgggaacaccacactGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAg > 1:58627‑M1/21‑100 (MQ=255) ggcgggaacaccacactGCCACCGGTGAGCTGGCGACAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAgtgt > 1:2183002‑M1/18‑100 (MQ=255) catcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGtgtg > 1:471471/1‑100 (MQ=33) ttccgatctGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtgg < 1:2023811/92‑1 (MQ=255) cgggaacaccccaccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtgg > 2:1449309‑M1/16‑100 (MQ=255) cgggaacaccacaccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtgg > 1:2008661‑M1/16‑100 (MQ=255) atcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtgg < 2:2241072/100‑1 (MQ=33) atcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtgg > 1:246035/1‑100 (MQ=33) atcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtgg < 1:674807/100‑1 (MQ=33) tcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtggt > 2:710176/1‑100 (MQ=32) tcaGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtggt < 1:1935198/100‑1 (MQ=33) caGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtggtg < 1:1255861/100‑1 (MQ=33) gggTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGtt > 1:2186133/1‑100 (MQ=33) ggTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTc > 2:1283615/1‑100 (MQ=33) ggTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTAAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTc > 1:804972/1‑100 (MQ=17) gTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTcc < 1:1488421/100‑1 (MQ=33) ttGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTccc < 1:81966/100‑1 (MQ=33) tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGTCGGCGAAGACGGTGGCAGTGTGGTGTTCccg > 1:1148013/1‑100 (MQ=18) tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCccg > 1:2968432/1‑100 (MQ=33) tGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCccg > 2:177900/1‑100 (MQ=33) gAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTgtggagatcggaa > 2:2023794/1‑91 (MQ=255) aaaCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCccgcc < 2:1752467/100‑1 (MQ=33) aaCCGCCGCCGGTGAGCTGGCGAAAACGCAGCGCCGCAGTCTGGCGGATACCCCTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCccgccg < 1:3058115/100‑1 (MQ=255) aaCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCccgccg < 2:2260004/100‑1 (MQ=33) aCCGCCACCGGTGAGCTGGCGAAAACGCAGCGTCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCgg < 2:346738/100‑1 (MQ=18) aCCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCgg < 1:1738469/100‑1 (MQ=33) ccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGt > 2:2104550/1‑100 (MQ=33) ccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGt < 1:899242/100‑1 (MQ=33) ccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGt < 2:734869/100‑1 (MQ=33) ccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGt > 1:1681032/1‑100 (MQ=33) ccGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGAGGCAGTGTGGTGTTCccgcc > 1:676133/1‑97 (MQ=17) cGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTg < 2:1976319/100‑1 (MQ=33) cGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTg < 2:2426798/100‑1 (MQ=33) GCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGTATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGc > 2:2186113‑M1/1‑100 (MQ=255) GCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCATCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGc > 2:1723274‑M1/1‑100 (MQ=255) GCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGc < 1:2896836‑M1/100‑1 (MQ=255) | TGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGC > NC_000913/734538‑734736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |