New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 277679 =NA (NA)5 (0.050) 4/164 NT NA noncoding (5/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 277704 = NA (NA)noncoding (30/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 122 total aligned reads displayed.

CACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAG  >  NC_000913/277605‑277803
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tgttctggcggatgcggcataacgttttgtggttttgtaggccggataaggcgcttgtgccgccatccggcaatGCCTGATAAGCGCAGCGC‑‑ATCAGGCa                                                                                                     >  2:1422251‑M1/75‑100 (MQ=255)
  ccacGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCAtt                                                                                                   >  1:676376/1‑100 (MQ=255)
  ccacGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCAtt                                                                                                   >  2:1118855/1‑100 (MQ=255)
  ccacGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCAtt                                                                                                   >  2:2864393/1‑100 (MQ=255)
   cacGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTg                                                                                                  <  1:953402/100‑1 (MQ=255)
    acGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGc                                                                                                 >  1:2920523/1‑100 (MQ=255)
     cGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGcc                                                                                                <  1:403397/100‑1 (MQ=255)
      gCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCg                                                                                               <  1:3036044/100‑1 (MQ=255)
      gCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCg                                                                                               <  1:1846976/100‑1 (MQ=255)
       tggcggatgcggcataacgttttgtggttttgtaggccggataaggcgcttgtgccgccatccggcaatgcctgataagcgcagcgcatcaggcATTGcc                                                                                                <  1:2489672‑M2/6‑1 (MQ=255)
       ccTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCgg                                                                                              <  2:1560898/100‑1 (MQ=255)
        cTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGa                                                                                             >  1:2439168/1‑100 (MQ=255)
          gatgcggcataacgttttgttgttttgtaggccgcataaggcgcttgtgccgccatccggcaatGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGcc                                                                                                >  2:2583303‑M1/65‑95 (MQ=255)
          gCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTATATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATg                                                                                           <  2:2215102/100‑1 (MQ=255)
           cGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATgg                                                                                          >  1:2778684/1‑100 (MQ=255)
            ggATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGAtaag                                                                                         <  1:952997/100‑4 (MQ=255)
            ggATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATggc                                                                                         <  2:1296315/100‑1 (MQ=255)
             gATATCGCCGCGTTAAAAGCGCGAAGCTGATGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCCTTGCCGGATggcg                                                                                        >  1:2896531/1‑100 (MQ=255)
              atatCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATggcgg                                                                                       <  2:2483751/100‑1 (MQ=255)
               tatCGCGGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATggcgg                                                                                       <  2:2784381/99‑1 (MQ=255)
                atCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGca                                                                                     >  1:242608/1‑100 (MQ=255)
                atCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGca                                                                                     <  1:644698/100‑1 (MQ=255)
                 tCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGcac                                                                                    >  2:213435/1‑100 (MQ=255)
                   gccgcGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACaa                                                                                  >  1:2624262/1‑100 (MQ=255)
                     cgcgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAgc                                                                                <  1:2669461/100‑1 (MQ=255)
                       cgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAgcgc                                                                              >  1:983206/1‑100 (MQ=255)
                        gTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGcc                                                                             <  1:171678/100‑1 (MQ=255)
                         ttAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCt                                                                            >  2:2257814/1‑100 (MQ=255)
                          tAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCtt                                                                           >  2:1542192/1‑100 (MQ=255)
                            aaaGCGCGAAGCTGAGGGTTCATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCCACTTAt                                                                         >  2:1905568/1‑100 (MQ=255)
                              aGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATcc                                                                       >  1:2756562/1‑100 (MQ=255)
                                 tttgtaggccggataaggcgcttgtgccgccatccggcaatGCCTGAT‑‑GCGCTGCGCTTATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGc                                                                    >  1:2330634‑M1/42‑100 (MQ=255)
                                  cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                   >  1:1360787/1‑100 (MQ=255)
                                  cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                   <  1:2016775/100‑1 (MQ=255)
                                  cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                   <  2:2628146/100‑1 (MQ=255)
                                    aaGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTa                                                                 <  1:2422508/100‑1 (MQ=255)
                                    aaGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTa                                                                 <  2:1650872/100‑1 (MQ=255)
                                     aGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTAc                                                                <  1:33816/100‑1 (MQ=255)
                                      gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACa                                                               >  1:1869020/1‑100 (MQ=255)
                                      gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACa                                                               >  1:1549375/1‑100 (MQ=255)
                                        tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                             <  2:957246/100‑1 (MQ=255)
                                        tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                             >  1:913968/1‑100 (MQ=255)
                                        tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                             <  1:1133363/100‑1 (MQ=255)
                                          gccggataaggcgcttgtgccgccatccggcaatgcctgataagcgcagcgcatcaggcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                             >  1:2330634‑M2/60‑100 (MQ=255)
                                          aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                           <  2:1360778/100‑1 (MQ=255)
                                          aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                           <  1:497561/100‑1 (MQ=255)
                                          aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                           >  2:1708221/1‑100 (MQ=255)
                                          aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                           <  1:1033546/100‑1 (MQ=255)
                                           gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                          >  2:628267/1‑100 (MQ=255)
                                           gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                          <  1:834115/100‑1 (MQ=255)
                                           gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                          <  1:2031179/100‑1 (MQ=255)
                                           gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCAGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                          <  1:1219060/100‑1 (MQ=255)
                                            ggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACca                                                         >  2:2680350/1‑100 (MQ=255)
                                               ttATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaa                                                      <  1:344529/100‑1 (MQ=255)
                                                tATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaaa                                                     >  1:936546/1‑100 (MQ=255)
                                                   cGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACg                                                  <  2:313689/100‑1 (MQ=255)
                                                     ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                >  2:1268309/1‑100 (MQ=255)
                                                       tCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTAt                                              >  1:1655570/1‑100 (MQ=255)
                                                       tCTACATCGTTCATTGTAGGCCAGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATCGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAAc                                                   <  2:751989/95‑1 (MQ=255)
                                                        cTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTagg                                             >  2:1888447/1‑98 (MQ=255)
                                                        cTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTacg                                             >  2:1888436/1‑98 (MQ=255)
                                                        cTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATg                                             >  2:291155/1‑100 (MQ=255)
                                                         tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                            >  2:2813869/1‑100 (MQ=255)
                                                           cATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                          >  2:3065970/1‑100 (MQ=255)
                                                           cATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                          <  1:2250468/100‑1 (MQ=255)
                                                           cATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                          <  1:199344/100‑1 (MQ=255)
                                                              cGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCAt                                       <  1:1325695/100‑1 (MQ=255)
                                                                ttCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATcc                                     >  1:2910226/1‑100 (MQ=255)
                                                                   cggcaatGCCTGAT‑‑GCGCTGCGCTTATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                  <  1:2379574‑M1/93‑1 (MQ=255)
                                                                    ggcaatGCCTGAT‑‑GCGCTGCGCTTATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCa                                 <  1:2489672‑M1/94‑1 (MQ=255)
                                                                     tGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAg                                <  1:2623881/100‑1 (MQ=255)
                                                                     tGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAg                                >  2:560770/1‑100 (MQ=255)
                                                                     tGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAg                                <  1:1363811/100‑1 (MQ=255)
                                                                      ggcaatgcctgatgcgctgcgcttatcaggcATTGCCGGATGGCGGCACAAGCGCCTTATGCGGCCTACAAAACAACAAAACGTTATGCCGCATc                                      >  2:2583303‑M2/32‑95 (MQ=255)
                                                                      gTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                               >  2:3059002/1‑100 (MQ=255)
                                                                      gTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                               <  2:1223780/100‑1 (MQ=255)
                                                                        aGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaac                             >  1:1069938/1‑100 (MQ=255)
                                                                         ggCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                            >  1:1708349/1‑100 (MQ=255)
                                                                           tgcctgatgcgctgcgcttatcaggcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                            >  2:1422251‑M2/27‑100 (MQ=255)
                                                                           CCTGATAAGCGCAGCTC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                          >  1:3059031‑M1/1‑100 (MQ=255)
                                                                             TGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaaca                        <  1:588522‑M1/100‑1 (MQ=255)
                                                                              GATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAGCGTTATGCCGCATCCGCCAGAACAAACAt                       >  2:2677452‑M1/1‑100 (MQ=255)
                                                                              GATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaaca                        <  2:1842863‑M1/99‑1 (MQ=255)
                                                                                TAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                     <  1:1863061‑M1/100‑1 (MQ=255)
                                                                                TAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                     <  1:537958‑M1/100‑1 (MQ=255)
                                                                                   gcgcagcgc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGt                  >  1:67643/1‑100 (MQ=255)
                                                                                       agcgc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgg              >  2:890137/1‑100 (MQ=255)
                                                                                        gcgc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgga             >  1:1103368/1‑100 (MQ=255)
                                                                                        gcgc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgga             >  2:882991/1‑100 (MQ=255)
                                                                                         cgc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggat            <  1:656515/100‑1 (MQ=255)
                                                                                          gc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg           <  2:2227476/100‑1 (MQ=255)
                                                                                          gc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg           <  2:2911503/100‑1 (MQ=255)
                                                                                          gc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg           >  1:26303/1‑100 (MQ=255)
                                                                                          gc‑‑aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg           <  1:297671/100‑1 (MQ=255)
                                                                                              atcaggcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCGACAAAACAACAAAACGTTAGGCCGCATCAGACAGAACAAACATGCCGTACggatgga         >  2:2867412‑M2/8‑100 (MQ=255)
                                                                                               tcaggcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatggat        >  2:2203731‑M2/7‑100 (MQ=255)
                                                                                                caggcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAtt       >  2:1451022‑M2/6‑100 (MQ=255)
                                                                                                 aggcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAttt      >  2:2442661‑M2/5‑100 (MQ=255)
                                                                                                   gcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCa    <  1:1515669‑M2/98‑1 (MQ=255)
                                                                                                   gcATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCa    <  2:1290712‑M2/98‑1 (MQ=255)
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CACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGC‑‑ATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAG  >  NC_000913/277605‑277803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.