BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4459872	137 (0.890)	10 (0.070)	10/180	18.9	7.5%	intergenic (+17/+28)	cybC/nrdG	pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
*	?	NC_000913	= 4459886	122 (0.870)	10 (0.070)	10/180	18.9	7.5%	intergenic (+31/+14)	cybC/nrdG	pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 141 total aligned reads displayed.

ATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGC  >  NC_000913/4459773‑4459969

aTGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGtt                                                                                                   >  1:1036353/1‑100 (MQ=255)

 tGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTg                                                                                                  >  1:554198/1‑100 (MQ=255)

 tGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTg                                                                                                  <  1:489348/100‑1 (MQ=255)

   aaGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGcc                                                                                                <  2:2342692/100‑1 (MQ=255)

     ggTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATGTCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTg                                                                                              <  2:2114220/100‑1 (MQ=255)

     ggTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTg                                                                                              <  1:2463299/100‑1 (MQ=255)

      gtaaagtaaaCGAAGCGCAGGCTGCTGCAGAGCAACTGACAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCGGTTGCCTGc                                                                                             <  2:2645688/100‑1 (MQ=255)

      gtaaagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGc                                                                                             <  1:700728/100‑1 (MQ=255)

      gtaaagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGc                                                                                             <  1:306232/100‑1 (MQ=255)

        aaagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTCATTCCTCATTTCCCTGTTGCCTGCAc                                                                                           <  1:2351442/100‑1 (MQ=255)

        aaagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCAc                                                                                           <  1:1062534/100‑1 (MQ=255)

         aagtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACt                                                                                          >  1:3192861/1‑100 (MQ=255)

           gtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCa                                                                                        >  1:1765747/1‑100 (MQ=255)

           gtaaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCa                                                                                        <  1:3419624/100‑1 (MQ=255)

            taaaAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTACCTgagtgcag                                                                                       >  1:2500063/1‑93 (MQ=255)

             aaaaGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAgg                                                                                      <  1:1209193/100‑1 (MQ=255)

              aaaGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt                                                                                     <  1:1370186/100‑1 (MQ=255)

               aagaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTa                                                                                    >  2:647136/1‑100 (MQ=255)

               aagaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTa                                                                                    <  2:3375268/100‑1 (MQ=255)

                 gaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAAc                                                                                  >  2:323432/1‑100 (MQ=255)

                    gcgcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAgg                                                                               >  1:3347340/1‑100 (MQ=255)

                      gcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGa                                                                             >  1:96365/1‑100 (MQ=255)

                      gcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGa                                                                             >  1:1347533/1‑100 (MQ=255)

                        aGGCTGCTGCAGAGCGACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc                                                                           <  1:3801373/100‑1 (MQ=255)

                        aGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc                                                                           <  2:1564708/100‑1 (MQ=255)

                        aGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc                                                                           <  2:2608767/100‑1 (MQ=255)

                         ggCTGCTGCAGAGCAACTGAAAATGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt                                                                          >  2:3781108/1‑100 (MQ=255)

                         ggCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt                                                                          >  2:3599266/1‑100 (MQ=255)

                         ggCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt                                                                          >  1:3079934/1‑100 (MQ=255)

                         ggCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTACACTCAGGTAACAGGGAACt                                                                          <  1:842805/100‑1 (MQ=255)

                          atctctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCAGTTCCCTGTTACCTGAGTGCAGGCAACAGGGaaa                                                                           <  2:3191833/94‑2 (MQ=21)

                           ctgctgCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTa                                                                        <  2:2487293/100‑1 (MQ=255)

                              ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca                                                                     >  2:1325321/1‑100 (MQ=255)

                              ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca                                                                     <  1:2824831/100‑1 (MQ=255)

                              ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCAGTTCCCTGTTACCTGAGTGCAGGCAACAGGGaaaagatcg                                                                     >  1:3191849/1‑93 (MQ=21)

                               tgcAGAGCAACTGAAAAGGACCCGCAATTAATATCACAAGAAGTATCGTTAATTGCTCATTTCCCTGTAGCCTGCAGTCAGGTAACCGGGAAGTTa                                                                        >  2:14870/1‑96 (MQ=255)

                               tgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat                                                                    >  1:3268666/1‑100 (MQ=255)

                               tgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat                                                                    <  2:3027908/100‑1 (MQ=255)

                                gcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                   <  1:3171684/100‑1 (MQ=255)

                                gcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                   >  1:2572146/1‑100 (MQ=255)

                                 cAGAGAAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCg                                                                  <  1:922574/100‑1 (MQ=255)

                                  agagCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGc                                                                 <  2:544421/100‑1 (MQ=255)

                                   gagCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCa                                                                >  1:3712282/1‑100 (MQ=255)

                                       aaCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatg                                                            <  2:2048631/100‑1 (MQ=255)

                                       aaCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatg                                                            <  1:3437504/100‑1 (MQ=255)

                                        aCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga                                                           <  2:1987969/100‑1 (MQ=255)

                                         cTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgat                                                          >  2:770701/1‑100 (MQ=255)

                                           gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                        >  2:3018425/1‑100 (MQ=255)

                                           gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                        <  2:393584/100‑1 (MQ=255)

                                           gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                        >  1:2148551/1‑100 (MQ=255)

                                           gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                        >  2:453398/1‑100 (MQ=255)

                                             aaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcac                                                      >  1:2029159/1‑100 (MQ=255)

                                                  aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCaccacc                                                  <  1:2013051/99‑1 (MQ=255)

                                                  aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt                                                 >  2:1710799/1‑100 (MQ=255)

                                                  aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt                                                 <  1:846323/100‑1 (MQ=255)

                                                   cccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTg                                                >  1:1812062/1‑100 (MQ=255)

                                                     cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt                                              <  2:554197/100‑1 (MQ=255)

                                                     cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt                                              >  1:2419624/1‑100 (MQ=255)

                                                     cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt                                              <  1:2211547/100‑1 (MQ=255)

                                                       cAATTCATATCACAAGAAGTATCGTTAATTCGTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtg                                            >  1:2599111/1‑100 (MQ=255)

                                                       cAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtg                                            <  2:125032/100‑1 (MQ=255)

                                                        aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                           <  1:647137/100‑1 (MQ=255)

                                                        aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                           <  1:2383856/100‑1 (MQ=255)

                                                        aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                           <  2:2219290/100‑1 (MQ=255)

                                                            cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct                                       >  1:3757051/1‑100 (MQ=255)

                                                            cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct                                       <  1:1495968/100‑1 (MQ=255)

                                                            cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct                                       >  1:3020971/1‑100 (MQ=255)

                                                               atCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGcc                                    <  1:1732911/100‑1 (MQ=255)

                                                                 cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc                                  >  1:695544/1‑100 (MQ=255)

                                                                 cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc                                  >  1:3250174/1‑100 (MQ=255)

                                                                 cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc                                  >  1:3688760/1‑100 (MQ=255)

                                                                  acaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgcg                                 >  1:2196536/1‑100 (MQ=255)

                                                                  acaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgcg                                 <  1:2524525/100‑1 (MQ=255)

                                                                   caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc                                >  1:1294625/1‑100 (MQ=255)

                                                                     agaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCa                              <  1:927347/100‑1 (MQ=255)

                                                                        agTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGAt                           >  2:2568421/1‑100 (MQ=255)

                                                                           aTCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAg                        <  2:3193438/100‑1 (MQ=255)

                                                                              gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGa                     >  2:2752093/1‑100 (MQ=255)

                                                                                tAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAg                   >  1:1247191/1‑100 (MQ=255)

                                                                                tAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCCGATTGCTGCTGCCGCGCCAGATCAGGGAAg                   <  2:189198/100‑1 (MQ=255)

                                                                                 aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAgg                  >  1:1600321/1‑100 (MQ=255)

                                                                                  aTTCCTCCTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCGGCCGCGCCAGATCAGGGAAggg                 <  2:896748/100‑1 (MQ=255)

                                                                                  aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAggg                 <  2:1036350/100‑1 (MQ=255)

                                                                                     ccTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGAACAGGGAAGGGTCt              <  1:2602263/100‑1 (MQ=255)

                                                                                      cTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCtt             >  2:660181/1‑100 (MQ=255)

                                                                                       tCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCttt            <  2:733969/100‑1 (MQ=255)

                                                                                         aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTa          <  1:3831622/100‑1 (MQ=255)

                                                                                         aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTa          <  2:900774/100‑1 (MQ=255)

                                                                                         aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGAACCACCTGATTGCTGCCGCCGCGCCAGATCAGGGAAGGGTCTTTTa          >  2:3794546/1‑100 (MQ=255)

                                                                                          tttCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTaa         >  2:3688777/1‑100 (MQ=255)

                                                                                           ttCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTaaa        <  2:1066544/100‑1 (MQ=255)

                                                                                            tCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAAt       >  2:1090739/1‑100 (MQ=255)

                                                                                            tCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAAt       <  2:3020955/100‑1 (MQ=255)

                                                                                             cccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAAt       <  1:3599283/99‑1 (MQ=255)

                                                                                              ccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATcc     >  1:3773346/1‑100 (MQ=255)

                                                                                               cTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCt    >  1:1105754/1‑100 (MQ=255)

                                                                                                tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTg   <  2:3868313/100‑1 (MQ=255)

                                                                                                tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTg   <  2:770908/100‑1 (MQ=255)

                                                                                                 gTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGc  <  1:2720498/100‑1 (MQ=255)

                                                                                                 gTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGc  <  2:2494738/100‑1 (MQ=255)

ATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGC  >  NC_000913/4459773‑4459969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.