BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4459872	137 (0.890)	10 (0.070)	10/180	18.9	7.5%	intergenic (+17/+28)	cybC/nrdG	pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
*	?	NC_000913	= 4459886	122 (0.870)	10 (0.070)	10/180	18.9	7.5%	intergenic (+31/+14)	cybC/nrdG	pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 134 total aligned reads displayed.

AAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGA  >  NC_000913/4459787‑4459985

aaaGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGt                                                                                                     <  1:2590691/100‑1 (MQ=255)

 aagaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTa                                                                                                    >  1:3167846/1‑100 (MQ=255)

 aagaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTa                                                                                                    <  2:3375268/100‑1 (MQ=255)

 aagaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTa                                                                                                    >  2:647136/1‑100 (MQ=255)

   gaagCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAAc                                                                                                  >  2:323432/1‑100 (MQ=255)

      gcgcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAgg                                                                                               >  1:3347340/1‑100 (MQ=255)

        gcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGa                                                                                             >  1:1347533/1‑100 (MQ=255)

        gcAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGa                                                                                             >  1:96365/1‑100 (MQ=255)

          aGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc                                                                                           <  2:2608767/100‑1 (MQ=255)

          aGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAAc                                                                                           <  2:1564708/100‑1 (MQ=255)

           ggCTGCTGCAGAGCAACTGAAAATGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt                                                                                          >  2:3781108/1‑100 (MQ=255)

           ggCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt                                                                                          >  1:3079934/1‑100 (MQ=255)

           ggCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACt                                                                                          >  2:3599266/1‑100 (MQ=255)

           ggCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTACACTCAGGTAACAGGGAACt                                                                                          <  1:842805/100‑1 (MQ=255)

            atctctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCAGTTCCCTGTTACCTGAGTGCAGGCAACAGGGaaa                                                                                           <  2:3191833/94‑2 (MQ=21)

             ctgctgCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTa                                                                                        <  2:2487293/100‑1 (MQ=255)

                ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca                                                                                     >  2:1325321/1‑100 (MQ=255)

                ctgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatca                                                                                     <  1:2824831/100‑1 (MQ=255)

                 tgcAGAGCAACTGAAAAGGACCCGCAATTAATATCACAAGAAGTATCGTTAATTGCTCATTTCCCTGTAGCCTGCAGTCAGGTAACCGGGAAGTTa                                                                                        >  2:14870/1‑96 (MQ=255)

                 tgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTGCCTGTAGCCTGCACTCAGGTAACAGGGAACTTatcat                                                                                    >  2:2602250/1‑100 (MQ=255)

                 tgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat                                                                                    >  1:3268666/1‑100 (MQ=255)

                 tgcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcat                                                                                    <  2:3027908/100‑1 (MQ=255)

                  gcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                                   >  2:573400/1‑100 (MQ=255)

                  gcAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTatcatc                                                                                   <  1:3171684/100‑1 (MQ=255)

                     gagCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCa                                                                                >  2:1644511/1‑100 (MQ=255)

                       gCAACTGAAAACGTCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCATTCAGGTAACAGGGAACTTATCATCGCa                                                                                <  2:2354000/98‑1 (MQ=255)

                         aaCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatg                                                                            <  1:3437504/100‑1 (MQ=255)

                         aaCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatg                                                                            <  2:2048631/100‑1 (MQ=255)

                          aCTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatga                                                                           <  2:1987969/100‑1 (MQ=255)

                           cTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgat                                                                          >  1:3868330/1‑100 (MQ=255)

                           cTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAatgat                                                                          >  2:770701/1‑100 (MQ=255)

                             gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                                        >  2:1070936/1‑100 (MQ=255)

                             gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                                        >  2:3018425/1‑100 (MQ=255)

                             gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                                        <  2:393584/100‑1 (MQ=255)

                             gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                                        >  1:2148551/1‑100 (MQ=255)

                             gAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGc                                                                        >  2:453398/1‑100 (MQ=255)

                               aaaCGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGcac                                                                      >  1:2029159/1‑100 (MQ=255)

                                    aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCaccacc                                                                  <  1:2013051/99‑1 (MQ=255)

                                    aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt                                                                 >  2:1710799/1‑100 (MQ=255)

                                    aCCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCt                                                                 <  1:846323/100‑1 (MQ=255)

                                     cccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTg                                                                >  1:594202/1‑100 (MQ=255)

                                     cccGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTg                                                                >  1:1908248/1‑100 (MQ=255)

                                       cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt                                                              >  1:2419624/1‑100 (MQ=255)

                                       cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt                                                              <  1:2211547/100‑1 (MQ=255)

                                       cGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGAt                                                              <  2:554197/100‑1 (MQ=255)

                                         cAATTCATATCACAAGAAGTATCGTTAATTCGTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtg                                                            >  1:2599111/1‑100 (MQ=255)

                                         cAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtg                                                            <  2:125032/100‑1 (MQ=255)

                                          aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                                           <  2:2219290/100‑1 (MQ=255)

                                          aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                                           <  1:2383856/100‑1 (MQ=255)

                                          aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                                           <  1:647137/100‑1 (MQ=255)

                                          aaTTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgc                                                           >  2:1904023/1‑100 (MQ=255)

                                              cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct                                                       >  1:3757051/1‑100 (MQ=255)

                                              cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct                                                       >  1:3020971/1‑100 (MQ=255)

                                              cATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgct                                                       <  1:1495968/100‑1 (MQ=255)

                                                tatCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATtgctgctgc                                                     <  2:3354131/100‑1 (MQ=255)

                                                 atCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGcc                                                    <  1:1732911/100‑1 (MQ=255)

                                                   cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc                                                  >  1:3250174/1‑100 (MQ=255)

                                                   cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc                                                  >  1:3688760/1‑100 (MQ=255)

                                                   cacaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgc                                                  >  1:2311444/1‑100 (MQ=255)

                                                    acaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgcg                                                 >  1:3193454/1‑100 (MQ=255)

                                                    acaAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCcgcg                                                 <  1:2524525/100‑1 (MQ=255)

                                                     caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCgcgc                                                >  1:1294625/1‑100 (MQ=255)

                                                     caAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCAgcgc                                                >  1:896750/1‑100 (MQ=255)

                                                       agaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCa                                              <  1:927347/100‑1 (MQ=255)

                                                        gaagTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAg                                             >  1:3711238/1‑100 (MQ=255)

                                                          agTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGAt                                           >  2:2568421/1‑100 (MQ=255)

                                                             aTCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAg                                        <  2:3193438/100‑1 (MQ=255)

                                                             aTCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAg                                        >  1:1413936/1‑100 (MQ=255)

                                                               cGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAggg                                      >  1:3327687/1‑100 (MQ=255)

                                                                gTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGa                                     >  2:2752093/1‑100 (MQ=255)

                                                                  tAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAg                                   >  1:1247191/1‑100 (MQ=255)

                                                                   aaTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAgg                                  >  1:1600321/1‑100 (MQ=255)

                                                                    aTTCCTCCTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCGGCCGCGCCAGATCAGGGAAggg                                 <  2:896748/100‑1 (MQ=255)

                                                                    aTTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAggg                                 <  2:1036350/100‑1 (MQ=255)

                                                                       ccTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGAACAGGGAAGGGTCt                              <  1:2602263/100‑1 (MQ=255)

                                                                         tCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCttt                            <  2:733969/100‑1 (MQ=255)

                                                                          cATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCtttt                           <  1:1110019/100‑1 (MQ=255)

                                                                           aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTa                          <  2:900774/100‑1 (MQ=255)

                                                                           aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTa                          <  1:3831622/100‑1 (MQ=255)

                                                                           aTTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGAACCACCTGATTGCTGCCGCCGCGCCAGATCAGGGAAGGGTCTTTTa                          >  2:3794546/1‑100 (MQ=255)

                                                                              tCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAAt                       >  2:1090739/1‑100 (MQ=255)

                                                                              tCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAAt                       >  2:3023319/1‑100 (MQ=255)

                                                                               cccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAAt                       <  1:3599283/99‑1 (MQ=255)

                                                                                ccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATcc                     >  1:3773346/1‑100 (MQ=255)

                                                                                ccTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATcc                     >  1:376338/1‑100 (MQ=255)

                                                                                 cTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCt                    >  1:1105754/1‑100 (MQ=255)

                                                                                 cTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCt                    >  1:2494748/1‑100 (MQ=255)

                                                                                  tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTg                   <  2:770908/100‑1 (MQ=255)

                                                                                  tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTg                   >  2:3761166/1‑100 (MQ=255)

                                                                                  tGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTg                   <  2:3868313/100‑1 (MQ=255)

                                                                                   gTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGc                  <  1:2720498/100‑1 (MQ=255)

                                                                                        cTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACaaa             >  2:2797064/1‑100 (MQ=255)

                                                                                        cTGCACTCAAGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACaaa             <  2:1812058/100‑1 (MQ=255)

                                                                                           cACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAAttt          >  1:2165480/1‑100 (MQ=255)

                                                                                            aCTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTg         >  1:3840522/1‑100 (MQ=255)

                                                                                              tCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGcc       <  1:1324390/100‑1 (MQ=255)

                                                                                               cAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCg      >  1:1683548/1‑100 (MQ=255)

                                                                                               cAGGTAACAGCGAACTTATCATCGCAAATGATGCACCACCTGATTCCTCCAGCCACGCCACATCACAGAACTGTCTTTTAAATCCTGCACAAATTTGCCg      <  2:3219886/100‑1 (MQ=255)

                                                                                                  gTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCg   <  1:1710803/100‑1 (MQ=255)

                                                                                                   tAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGa  >  1:2048506/1‑100 (MQ=255)

AAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAATTCCTCATTTCCCTGTTGCCTGCACTCAGGTAACAGGGAACTTATCATCGCAAATGATGCACCACCTGATTGCTGCTGCCGCGCCAGATCAGGGAAGGGTCTTTTAAATCCTGCACAAATTTGCCGTCGA  >  NC_000913/4459787‑4459985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.