| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4621981 | 140 (1.060) | 6 (0.050) | 6/166 | NT | 4.3% | coding (213/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | = 4622003 | 139 (1.130) | coding (235/1332 nt) | yjjJ | putative protein kinase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4621879‑4621981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggaTGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGCCC < NC_000913/4622003‑4621905 TCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACC < 1:1368475/100‑1 GGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGG > 2:1197711/1‑100 GGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGG > 2:793239/1‑100 GGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGG > 2:1183744/1‑100 GGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGAGGGTGGACGATACCGG > 1:2163517/1‑100 GGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGA > 2:3308690/1‑100 GGTGATTCGCTTTGGTAAAGCACGGGAAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGG < 1:3566677/99‑1 CGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATC < 2:2637284/100‑1 ATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGT < 2:2363554/100‑1 TATGCACTGCTGCGTCCTTATCGCGGAATTGTGCGTATTCCCGTCTGGCGGGTGGACGATACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTC < 2:1014076/100‑1 TATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGTTGGACGATACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCG < 1:2057223/98‑1 ATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCC < 1:2645030/100‑1 TATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTAGACGATACCGGA‑‑AAGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAA < 1:801168/97‑1 ACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGT > 2:999143/1‑100 ACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGT < 1:1320895/100‑1 ACCGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGT > 2:1873364/1‑100 CGGATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTG < 1:832485/100‑1 GGATGTCGGCGAATTTATGTGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGC < 2:1453521/100‑1 GGATGTCGGCGAATTTATGTGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGC < 2:1450832/100‑1 GATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGCC < 2:275941/100‑1 ATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGCCC < 2:391424/100‑1 ATGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGCCC < 1:328015/100‑1 TCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4621879‑4621981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggaTGTCGGCGAATTTATGCGCCTTTCCGGTATCGTCCACCCGCCAGACGGGAATACGCTCAATTCCGCGATAAGGACGCAGCAGTGCATATCGCGTTGCCC < NC_000913/4622003‑4621905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |