BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4621981	140 (1.060)	6 (0.050)	6/166	NT	4.3%	coding (213/1332 nt)	yjjJ	putative protein kinase
*	?	NC_000913	= 4622003	139 (1.130)	6 (0.050)	6/166	NT	4.3%	coding (235/1332 nt)	yjjJ	putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 186 total aligned reads displayed.

GGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCC  >  NC_000913/4621905‑4622099

gggCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAt                                                                                                 <  1:328015‑M2/100‑2 (MQ=255)

  gCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCACATAAATTCGCCGACAtcc                                                                                               <  2:1453521‑M2/100‑4 (MQ=255)

   cAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccg                                                                                              <  1:832485‑M2/100‑5 (MQ=255)

      cgcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGtt                                                                                           >  2:2886563/1‑100 (MQ=255)

        cgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgt                                                                                         >  1:1442855/1‑100 (MQ=255)

        cgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgt                                                                                         >  1:3697758/1‑100 (MQ=255)

        catcaaaccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgt                                                                                         >  1:1873846‑M1/64‑100 (MQ=255)

          atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGc                                                                                       <  1:1040240/100‑1 (MQ=255)

          atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGc                                                                                       <  2:408901/100‑1 (MQ=255)

          atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGc                                                                                       >  1:3399381/1‑100 (MQ=255)

           tatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCt                                                                                      >  1:75029/1‑100 (MQ=255)

           tatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCt                                                                                      <  2:67140/100‑1 (MQ=255)

           tatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCt                                                                                      <  1:325767/100‑1 (MQ=255)

            aaaccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTg                                                                                     >  1:1754303‑M1/60‑100 (MQ=255)

             tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                                    >  2:2618904/1‑100 (MQ=255)

             tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                                    <  2:1511529/100‑1 (MQ=255)

             tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                                    >  2:104525/1‑100 (MQ=255)

             tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                                    >  1:2814088/1‑100 (MQ=255)

              gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                                   >  2:2033252/1‑100 (MQ=255)

              gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                                   >  1:3195058/1‑100 (MQ=255)

               ccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGcc                                                                                  >  1:3416931‑M1/57‑100 (MQ=255)

                     tgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAggg                                                                            <  2:347626/100‑1 (MQ=255)

                       cGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGaa                                                                          >  2:886341/1‑100 (MQ=255)

                        gTCCTTATCGCGGAATTGAGCGTATGCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg                                                                         <  1:2308666/100‑1 (MQ=255)

                         tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCACATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGt                                                                        <  1:1450826/100‑1 (MQ=255)

                           cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                                      >  1:1057314/1‑100 (MQ=255)

                           cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                                      <  2:898408/100‑1 (MQ=255)

                           cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                                      <  2:1837411/100‑1 (MQ=255)

                            ttATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGt                                                                     <  2:1151364/100‑1 (MQ=255)

                             tATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTc                                                                    >  2:1865948/1‑100 (MQ=255)

                              aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCt                                                                   >  1:2803819/1‑100 (MQ=255)

                              aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCt                                                                   >  1:1205522/1‑100 (MQ=255)

                               tCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTg                                                                  <  1:1543169/100‑1 (MQ=255)

                                  cgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTa                                                               <  1:519661/100‑1 (MQ=255)

                                     aaTTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACa                                                            <  2:19244/100‑1 (MQ=255)

                                      aTTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAg                                                           >  2:1410420/1‑100 (MQ=255)

                                      aTTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAg                                                           <  2:725227/100‑1 (MQ=255)

                                       ttGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAgg                                                          <  2:660578/100‑1 (MQ=255)

                                         gAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcg                                                        >  1:1110903/1‑100 (MQ=255)

                                         gAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcg                                                        >  2:3146409/1‑100 (MQ=255)

                                          aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                                       >  2:619808/1‑100 (MQ=255)

                                          aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                                       <  1:275941/100‑1 (MQ=255)

                                          aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                                       <  1:755370/100‑1 (MQ=255)

                                          aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                                       >  1:640733/1‑100 (MQ=255)

                                           gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa                                                      >  1:3054751/1‑100 (MQ=255)

                                             gTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAg                                                     >  1:1491746/1‑99 (MQ=255)

                                               aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATg                                                  <  1:539626/100‑1 (MQ=255)

                                                ttCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATgg                                                 >  2:131169/1‑100 (MQ=255)

                                                 tCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGc                                                >  2:3317809/1‑100 (MQ=255)

                                                  cccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcg                                               >  2:2079028/1‑100 (MQ=255)

                                                   ccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcga                                              >  2:922138/1‑100 (MQ=255)

                                                     gTCTGGCGGGTGGACGATCCCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGAAGGGAAGTTGTCTGTTAACAGGCGCAGATGGagacg                                            <  1:3296390/100‑1 (MQ=255)

                                                     gTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcgacg                                            >  2:2854947/1‑100 (MQ=255)

                                                        tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc                                         >  1:336088/1‑100 (MQ=255)

                                                         ggCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACa                                        >  1:1000282/1‑100 (MQ=255)

                                                         ggCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACa                                        >  2:859091/1‑100 (MQ=255)

                                                         ggCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACa                                        <  1:2613579/100‑1 (MQ=255)

                                                         ggCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCAGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACa                                        >  2:1450366/1‑100 (MQ=255)

                                                           cGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAg                                       >  2:165017/1‑99 (MQ=255)

                                                             ggTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTgg                                    <  2:113339/100‑1 (MQ=255)

                                                              gTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGt                                   >  1:612522/1‑100 (MQ=255)

                                                                ggACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcat                                 <  1:2645030‑M2/100‑66 (MQ=255)

                                                                ggACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGttt                                 >  1:1399199/1‑100 (MQ=255)

                                                                 gACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTg                                >  1:1769405/1‑100 (MQ=255)

                                                                  aCGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatat                               <  2:2363554‑M2/100‑68 (MQ=255)

                                                                   cGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccaaccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcata                                <  1:2057223‑M2/98‑67 (MQ=255)

                                                                    gATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcg                             <  2:2637284‑M2/100‑70 (MQ=255)

                                                                    gATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg                             <  2:3009436/100‑1 (MQ=255)

                                                                    gATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTGGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg                             >  1:1987178/1‑100 (MQ=255)

                                                                     aTACCGGAAAGGCGCATACATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATgg                            <  1:3671446/100‑1 (MQ=255)

                                                                        CCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGttt                         >  2:1677286‑M1/1‑100 (MQ=255)

                                                                        CCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGttt                         <  1:1372935‑M1/100‑1 (MQ=255)

                                                                        CCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGttt                         <  2:3399144‑M1/100‑1 (MQ=255)

                                                                         CGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTg                        >  2:3440388‑M1/1‑100 (MQ=255)

                                                                           GAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGcc                      >  2:1057320‑M1/1‑100 (MQ=255)

                                                                            AAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc                     >  2:2977074‑M1/1‑100 (MQ=255)

                                                                            AAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc                     >  2:328015‑M1/1‑100 (MQ=255)

                                                                             aaGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCt                    <  2:2803836/100‑1 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  <  2:1086236/100‑1 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  <  1:957274/100‑1 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  >  2:1816174/1‑100 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  <  1:3228121/100‑1 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  <  2:3051295/100‑1 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  <  1:696429/100‑1 (MQ=255)

                                                                               ggCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTgg                  <  2:1491752/100‑1 (MQ=255)

                                                                                 cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGcccagatc                >  1:3329293/1‑95 (MQ=255)

                                                                                 cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTa                >  2:1009554/1‑100 (MQ=255)

                                                                                 cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTa                >  2:1788718/1‑100 (MQ=255)

                                                                                   cATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTAtt              >  2:2534035/1‑100 (MQ=255)

                                                                                     tAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTATCAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTg            <  1:2922418/100‑1 (MQ=255)

                                                                                     tAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTg            <  2:3097318/100‑1 (MQ=255)

                                                                                     tAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTg            <  1:3578026/100‑1 (MQ=255)

                                                                                     tAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTg            >  1:2089659/1‑100 (MQ=255)

                                                                                      aaaTTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGa           <  2:533595/100‑1 (MQ=255)

                                                                                        aatCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGAcc         >  2:2491195/3‑100 (MQ=255)

                                                                                        aTTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGAcc         <  2:2117605/100‑1 (MQ=255)

                                                                                          tCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGa       <  2:743647/100‑1 (MQ=255)

                                                                                           cGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAt      <  2:3615871/100‑1 (MQ=255)

                                                                                            gCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAtc     <  2:1923265/100‑1 (MQ=255)

                                                                                             ccGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAtct    >  2:481896/1‑100 (MQ=255)

GGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCC  >  NC_000913/4621905‑4622099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.