New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4621981140 (1.060)6 (0.050) 6/166 NT 4.3% coding (213/1332 nt) yjjJ putative protein kinase
?NC_000913 = 4622003 139 (1.130)coding (235/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 209 total aligned reads displayed.

GGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCC  >  NC_000913/4621882‑4622080
                                                                                                   |                                                                                                   
 gtcggagatcggtcaaataccagggcaaaccatcaaaccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGa                                                                                                     >  2:557711‑M1/94‑99 (MQ=255)
   gATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAg                                                                                                  <  1:1805014/100‑1 (MQ=255)
   gATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAg                                                                                                  <  2:2984546/100‑1 (MQ=255)
   gATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAg                                                                                                  <  1:1263549/100‑1 (MQ=255)
   gATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAg                                                                                                  >  2:182837/1‑100 (MQ=255)
    aTTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAgg                                                                                                 <  2:2397821/100‑1 (MQ=255)
     ttCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGgc                                                                                                >  1:3271764/1‑100 (MQ=255)
       cGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGgcgc                                                                                              >  2:326455/1‑100 (MQ=255)
       cGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGgcgc                                                                                              >  1:3503196/1‑100 (MQ=255)
         cTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCAt                                                                                            <  2:924285/100‑1 (MQ=255)
         cTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCAt                                                                                            <  1:78676/100‑1 (MQ=255)
          tttGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATa                                                                                           <  2:188601/100‑1 (MQ=255)
                aaaGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCg                                                                                     >  1:2181600/1‑100 (MQ=255)
                aaaGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCg                                                                                     <  2:2626360/100‑1 (MQ=255)
                aaaGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCg                                                                                     <  2:3655173/100‑1 (MQ=255)
                aaaGCACGGGCAACGCGATATGCACTGCTGCGTCCTTAGCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAAt                                                                                        <  1:294012/97‑1 (MQ=255)
                  aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc                                                                                   >  2:2077008/1‑100 (MQ=255)
                  aGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGcc                                                                                   >  1:907295/1‑100 (MQ=255)
                   gCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCg                                                                                     >  2:1305665/1‑97 (MQ=255)
                   gCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGc                                                                                    <  2:547811/98‑1 (MQ=255)
                    cACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCg                                                                                  >  2:2284824/1‑99 (MQ=255)
                    cACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGa                                                                                 >  2:755375/1‑100 (MQ=255)
                    cACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGa                                                                                 <  2:2551486/100‑1 (MQ=255)
                     aCGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGAc                                                                                <  2:473900/100‑1 (MQ=255)
                     aCGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGAc                                                                                <  1:1447765/100‑1 (MQ=255)
                       gggCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAt                                                                              <  2:391424‑M2/100‑2 (MQ=255)
                       gggCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAt                                                                              <  1:328015‑M2/100‑2 (MQ=255)
                         gCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCACATAAATTCGCCGACAtcc                                                                            <  2:1453521‑M2/100‑4 (MQ=255)
                            aCGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggt                                                                         <  1:1320895‑M2/100‑7 (MQ=255)
                             cgcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGtt                                                                        >  2:2886563/1‑100 (MQ=255)
                               cgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtatc                                                                      <  2:2637284‑M1/100‑32 (MQ=255)
                               cgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgt                                                                      >  1:3697758/1‑100 (MQ=255)
                               catcaaaccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgt                                                                      >  1:1873846‑M1/64‑100 (MQ=255)
                                 atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGc                                                                    >  1:3399381/1‑100 (MQ=255)
                                  tatGCACTGCTGCGTCCTTATCGCGGAATTGTGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtatcgtc                                                                   <  2:1014076‑M1/100‑35 (MQ=255)
                                  tatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGTTGGACGATACCGGAtgtcggcgaatttatgcgcctttccggtatcg                                                                     <  1:2057223‑M1/98‑33 (MQ=255)
                                  tatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCt                                                                   >  1:75029/1‑100 (MQ=255)
                                   aaaccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTg                                                                  >  1:1754303‑M1/60‑100 (MQ=255)
                                    tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                 >  2:104525/1‑100 (MQ=255)
                                    tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                 >  1:2814088/1‑100 (MQ=255)
                                    tGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                 <  2:1511529/100‑1 (MQ=255)
                                     gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                <  2:3503223/100‑1 (MQ=255)
                                     gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                >  1:3195058/1‑100 (MQ=255)
                                     accactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                >  1:2065089‑M1/58‑100 (MQ=255)
                                      ccactgttcgtcgccatctgcgcctgttaccagacaacttccctgcggccagcacaACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGcc                                                               >  1:3416931‑M1/57‑100 (MQ=255)
                                       aCTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCg                                                              <  2:1980973/100‑1 (MQ=255)
                                           ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAgg                                                          <  2:1839388/100‑1 (MQ=255)
                                           ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAgg                                                          <  2:1442861/100‑1 (MQ=255)
                                             gcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGa                                                        >  1:1390099/1‑100 (MQ=255)
                                              cGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGaa                                                       >  2:886341/1‑100 (MQ=255)
                                               gTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg                                                      <  1:3661940/100‑1 (MQ=255)
                                               gTCCTTATCGCGGAATTGAGCGTATGCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg                                                      <  1:2308666/100‑1 (MQ=255)
                                                tCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCACATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGt                                                     <  1:1453515/100‑1 (MQ=255)
                                                  cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                   >  1:1060839/1‑100 (MQ=255)
                                                  cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                   <  2:898408/100‑1 (MQ=255)
                                                   ttATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGt                                                  <  2:1151364/100‑1 (MQ=255)
                                                     aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCt                                                >  1:2803819/1‑100 (MQ=255)
                                                      tCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTg                                               <  1:1543169/100‑1 (MQ=255)
                                                      tCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTg                                               <  1:1440533/100‑1 (MQ=255)
                                                       cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTgg                                              <  2:3094215/100‑1 (MQ=255)
                                                        gcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGt                                             <  2:1790693/100‑1 (MQ=255)
                                                         cgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTa                                            <  1:519661/100‑1 (MQ=255)
                                                         cgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTa                                            <  2:448595/100‑1 (MQ=255)
                                                              ttGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAgg                                       <  2:660578/100‑1 (MQ=255)
                                                               tGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgc                                      <  2:702661/100‑1 (MQ=255)
                                                                gAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcg                                     >  2:3146409/1‑100 (MQ=255)
                                                                 aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                    >  2:619808/1‑100 (MQ=255)
                                                                 aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                    >  1:640733/1‑100 (MQ=255)
                                                                  gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                    <  1:324302/99‑1 (MQ=255)
                                                                  gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa                                   >  1:3054751/1‑100 (MQ=255)
                                                                    gTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAg                                  >  1:1491746/1‑99 (MQ=255)
                                                                      aTTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATg                               <  1:539626/100‑1 (MQ=255)
                                                                       ttCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATgg                              >  2:131169/1‑100 (MQ=255)
                                                                        tCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGc                             >  2:21510/1‑100 (MQ=255)
                                                                        tCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGc                             >  2:3317809/1‑100 (MQ=255)
                                                                            gTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcgacg                         >  2:2854947/1‑100 (MQ=255)
                                                                               tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc                      >  1:336088/1‑100 (MQ=255)
                                                                                ggCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACa                     >  1:1000282/1‑100 (MQ=255)
                                                                                ggCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACa                     <  1:2613579/100‑1 (MQ=255)
                                                                                  cGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAg                    >  2:165017/1‑99 (MQ=255)
                                                                                   gggTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTg                  <  2:1381031/100‑1 (MQ=255)
                                                                                     gTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGt                >  1:612522/1‑100 (MQ=255)
                                                                                       ggACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcat              <  1:2645030‑M2/100‑66 (MQ=255)
                                                                                         aCGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatat            <  2:2363554‑M2/100‑68 (MQ=255)
                                                                                          cGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGTTTGATg          >  2:1774153/1‑100 (MQ=255)
                                                                                           gATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTGGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg          >  1:1987178/1‑100 (MQ=255)
                                                                                              aCCGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgt       >  2:1873364‑M1/1‑6 (MQ=255)
                                                                                               CCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGttt      >  2:1677286‑M1/1‑100 (MQ=255)
                                                                                                cGGAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttg     <  1:832485‑M1/100‑97 (MQ=255)
                                                                                                CGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTg     >  2:3440388‑M1/1‑100 (MQ=255)
                                                                                                CGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTg     >  1:1783028‑M1/1‑100 (MQ=255)
                                                                                                CGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTg     >  1:330820‑M1/1‑100 (MQ=255)
                                                                                                 ggAtgtcggcgaatttatgtgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgc    <  2:1450832‑M1/100‑98 (MQ=255)
                                                                                                  gAtgtcggcgaatttatgcgcctttccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcc   <  2:275941‑M1/100‑99 (MQ=255)
                                                                                                  GAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGcc   >  2:1060845‑M1/1‑100 (MQ=255)
                                                                                                  GAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGcc   >  1:2409306‑M1/1‑100 (MQ=255)
                                                                                                   AAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc  >  1:104525‑M1/1‑100 (MQ=255)
                                                                                                   AAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc  >  2:328015‑M1/1‑100 (MQ=255)
                                                                                                   AAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc  >  2:2977074‑M1/1‑100 (MQ=255)
                                                                                                   AAAGGCGCATAAATGCGACGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc  >  1:1202715‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCC  >  NC_000913/4621882‑4622080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.