New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2808135 =NA (NA)4 (0.030) 4/164 NT NA noncoding (5/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2808165 = NA (NA)noncoding (35/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 172 total aligned reads displayed.

ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234
                                                                                                   |                                                                                                   
tgatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacg                                                                                                     <  2:3238878‑M1/1‑1 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCggg                                                                                                    <  1:3141433/100‑1 (MQ=255)
 gatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacgg                                                                                                    <  1:786261‑M1/2‑1 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCg                                                                                                  <  1:1024795/100‑1 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCg                                                                                                  >  2:488980/1‑100 (MQ=255)
   tgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacggcg                                                                                                  <  1:2299310‑M1/4‑1 (MQ=255)
   tgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacggcg                                                                                                  >  2:533608‑M1/97‑100 (MQ=255)
    gaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacggcgg                                                                                                 >  1:1911957‑M1/96‑100 (MQ=255)
     cAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGa                                                                                                >  1:3699347/1‑100 (MQ=255)
     aatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGa                                                                                                >  2:699456‑M1/95‑100 (MQ=255)
         gACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAg                                                                                            <  2:2856800/100‑1 (MQ=255)
           cacGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGc                                                                                          <  2:1520162/100‑1 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  2:651644/1‑100 (MQ=255)
              gTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGtt                                                                                       >  2:253327/1‑100 (MQ=255)
                 gATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGttttt                                                                                    >  2:2517228/1‑100 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTACGTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  >  1:866321/1‑100 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 <  1:3104148/100‑1 (MQ=255)
                    ggTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGcc                                                                                 >  2:1380750/1‑100 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                <  1:2669614/100‑1 (MQ=255)
                       tGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCa                                                                              >  2:2661175/1‑100 (MQ=255)
                       tGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCa                                                                              >  2:1085952/1‑100 (MQ=255)
                        ggATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCAt                                                                             <  1:2696016/100‑1 (MQ=255)
                         gATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            >  1:183265/1‑100 (MQ=255)
                         gATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            <  2:898364/100‑1 (MQ=255)
                         gATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            >  2:1768073/1‑100 (MQ=255)
                         gATCAAAGCCCACAAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGCGCGGATAAGGCGTGCTGGCCGCAt                                                                             >  1:2944592/1‑99 (MQ=255)
                          aTCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATcc                                                                           >  1:1184322/1‑100 (MQ=255)
                          aTCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGATTTTGCCGCATcc                                                                           >  2:2149493/1‑100 (MQ=255)
                           tCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccg                                                                          <  2:3630317/100‑1 (MQ=255)
                            cAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgc                                                                         >  1:3262649/1‑100 (MQ=255)
                             aaaGCCCACCAGGAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        <  1:484210/100‑1 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        <  1:2239476/100‑1 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        >  1:147542/1‑100 (MQ=255)
                                 atgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTc                                                                    >  1:651154‑M1/67‑100 (MQ=255)
                                   caccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtg                                                                  <  1:2539082/100‑1 (MQ=255)
                                   caccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtg                                                                  >  2:2354168/1‑100 (MQ=255)
                                     gcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgtg                                                                >  1:2528961‑M1/63‑100 (MQ=255)
                                     ccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgtg                                                                <  1:1072057/100‑1 (MQ=255)
                                      cagcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGc                                                               <  2:1476878/100‑1 (MQ=255)
                                       agcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGca                                                              >  2:1515198/1‑100 (MQ=255)
                                        gcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGcac                                                             >  1:3557668/1‑100 (MQ=255)
                                        gcagcagGTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGTCGTTCTGTGcac                                                             <  2:1795791/100‑1 (MQ=255)
                                            cagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATg                                                         <  2:1972794/100‑1 (MQ=255)
                                            cagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATg                                                         <  1:2175526/100‑1 (MQ=255)
                                             agTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGc                                                        >  2:284000/1‑100 (MQ=255)
                                              gTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGcc                                                       >  2:1676131/1‑100 (MQ=255)
                                              gTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGcc                                                       >  2:1664636/1‑100 (MQ=255)
                                              gTTCGATGGCTGAGTGAATGACGCGCTCCCCGCGTACAGTTAATTTTTATTCGTGCGGCTAACGCGTTTTGGCCGTATCCGCCGTTCTGTGCACAATccc                                                       <  1:2197379/100‑1 (MQ=255)
                                               ttCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCt                                                      >  1:3625389‑M1/1‑99 (MQ=255)
                                                 cGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtga                                                    >  2:2562546‑M1/1‑97 (MQ=255)
                                                  gATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtgat                                                   >  2:1198547‑M1/1‑96 (MQ=255)
                                                   atgtttGGGTGAATGATGTGCTAGCAGTGCAGAAGTAGTTTTTATTCGGGCGTATAAGACGTTTTTACCGCATCCGCCGTTCTGTGCACAATGCCTGATg                                                  <  1:2023421/95‑1 (MQ=255)
                                                    tGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCTGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGc                                                 >  1:2046699/1‑100 (MQ=255)
                                                    tGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGc                                                 >  1:2732321/1‑100 (MQ=255)
                                                     ggCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCg                                                >  2:1420956/1‑100 (MQ=255)
                                                     ggCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCg                                                <  1:3509967/100‑1 (MQ=255)
                                                      gCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCCTCCGCCGTTCTGTGCACAATGCCTGATGCg                                                >  1:3191356/1‑99 (MQ=255)
                                                      gCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGa                                               >  2:2108453/1‑100 (MQ=255)
                                                       cTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGAc                                              >  2:3019164/1‑100 (MQ=255)
                                                         gggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGc                                            >  2:1245216/1‑100 (MQ=255)
                                                           gttaaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTGTTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCt                                           <  2:3027943/96‑1 (MQ=255)
                                                            tGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCTGCCGGATAAGTCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCt                                           <  1:2286827/98‑1 (MQ=255)
                                                              acttctgcgcTGCCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       >  1:2946992/7‑100 (MQ=255)
                                                               cttctgcgcTGCCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      >  2:2976544/6‑100 (MQ=255)
                                                               aTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGCTAAGGCGTTTTTGCCGACACCGCCCTCCTGTGCACAATGCCTGATGCGACGATGgcgc                                      >  1:2059367/1‑100 (MQ=255)
                                                               aTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      >  2:3314322/1‑100 (MQ=255)
                                                                tGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGcgcg                                     <  1:3019142/100‑1 (MQ=255)
                                                                   ggCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCt                                  >  2:1791241/1‑100 (MQ=255)
                                                                    gcgcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCtt                                 <  2:3272008/100‑1 (MQ=255)
                                                                        tGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtgatgcgacgcgccagcgtcgcatca                             <  1:1268518‑M1/100‑27 (MQ=255)
                                                                         ggCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCAt                            >  2:2882033/1‑100 (MQ=255)
                                                                         ggCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCAt                            <  2:759307/100‑1 (MQ=255)
                                                                          gCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtgatgcgacgcgccagcgtcgcatcagg                           <  2:1921201‑M1/100‑29 (MQ=255)
                                                                            aGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         <  2:1576034/100‑1 (MQ=255)
                                                                            aGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         <  1:2080337/100‑1 (MQ=255)
                                                                             gcgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtgataagacgcgccagcgtcgcatcaggcat                        <  1:3310687‑M1/100‑32 (MQ=255)
                                                                              cgcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtgataagacgcgccagcgtcgcatcaggcatt                       <  1:651118‑M1/100‑33 (MQ=255)
                                                                               gcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                      <  2:2806218/100‑1 (MQ=255)
                                                                                 aGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCtgataagacgcgccagcgtcgcatcaggcattgtg                    <  1:2969118‑M1/100‑36 (MQ=255)
                                                                                 aGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACaa                    <  1:3217534/100‑1 (MQ=255)
                                                                                  gAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACaaa                   >  1:903003/1‑100 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  1:2863296/100‑1 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  2:1049859/100‑1 (MQ=255)
                                                                                     gTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACca                >  1:1929169/1‑100 (MQ=255)
                                                                                     gTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACca                <  2:1001313/100‑1 (MQ=255)
                                                                                     gTAATTTTGATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATCCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  1:2568207/99‑1 (MQ=255)
                                                                                          ttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCg           <  2:2668011/100‑1 (MQ=255)
                                                                                           tttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGc          <  1:3533246/100‑1 (MQ=255)
                                                                                            ttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGca         <  2:1632648/100‑1 (MQ=255)
                                                                                             tATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGcac        <  1:1676124/100‑1 (MQ=255)
                                                                                             tATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGcac        >  1:1624772/1‑100 (MQ=255)
                                                                                                 ngggCGGATAAGGCGTTTTTGCCGCATACGCCGTTCTGTGCACAATGCCTGATGCCACGCTGGCGCGTCTTATCATACCTACAAACCACATCTCACAttt    >  1:892230/2‑100 (MQ=25)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  2:860816/1‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  2:2299323/1‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  1:3467404/1‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  2:3414917/1‑100 (MQ=255)
                                                                                                  gggCGGATAAAGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGACTTATCATGCCTACAAACCACATCGCACATTTc   <  1:2423753/100‑1 (MQ=255)
                                                                                                   GGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTTTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTca  >  1:2431473‑M1/1‑100 (MQ=255)
                                                                                                   GGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTca  >  1:3076937‑M1/1‑100 (MQ=255)
                                                                                                   GGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTca  <  2:781021‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.