| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2406375 | 107 (0.870) | 19 (0.180) | 13/156 | NT | 16.1% | coding (267/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| ? | NC_000913 | = 2406380 | 104 (0.960) | coding (262/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes | |||||
Only 100 of 193 total aligned reads displayed.
ACTCACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGT > NC_000913/2406276‑2406474 | aCTCACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAACATTACTGAACATTAATGATGAG < 1:1988497‑M1/100‑1 (MQ=255) cTCACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑c < 2:893284/100‑1 (MQ=255) tCACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑Ca < 2:978851/100‑1 (MQ=255) tCACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑Ca < 1:1750009/100‑1 (MQ=255) cACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAg > 1:664644/1‑100 (MQ=255) cACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAg > 2:934209/1‑100 (MQ=255) gATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctc > 1:1933729‑M2/1‑97 (MQ=255) aTTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctca > 2:1205305‑M2/1‑96 (MQ=255) aTTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctca > 1:1780181‑M2/1‑96 (MQ=255) tAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGgcctgctcatca > 1:1206838‑M1/1‑88 (MQ=255) aaCAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGgcctgctcatcat > 2:185906‑M1/1‑87 (MQ=255) aaCAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatcat < 2:553813‑M2/100‑9 (MQ=255) aCAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatcatt < 2:54760‑M2/100‑10 (MQ=255) aGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGgcctgctcatcattaa < 2:2225791‑M1/100‑17 (MQ=255) aGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGgcctgctcatcattaa < 2:2225200‑M1/100‑17 (MQ=255) aGGAAAGGTAAGATCGTATCGGCAGATTCATCTCAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGgcctgctcatcattaa < 1:617237‑M1/100‑17 (MQ=255) gAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGgcctgctcatcattaatg < 1:1273553‑M1/100‑19 (MQ=255) gAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTaaaa < 2:2277811/100‑1 (MQ=255) gAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTaaaa < 2:2994694/100‑1 (MQ=255) aaGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACg < 1:2942370/100‑1 (MQ=255) aaGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACg < 2:862318/100‑1 (MQ=255) aGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑GCCTGctcatcattaatgttc > 1:2021411‑M2/1‑84 (MQ=255) ggTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCa > 1:1077259/1‑100 (MQ=255) gTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAg < 1:3148065/100‑1 (MQ=255) gTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAg < 2:1048938/100‑1 (MQ=255) aaGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑GCCTGctcatcattaatgttcagt > 1:3282258‑M2/1‑80 (MQ=255) cGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGAtttt > 1:2480900/1‑99 (MQ=255) gTATCGGCAGATTCATCTGAAGCACCGATAGCTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTcc < 1:2303205/100‑1 (MQ=255) ggCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCg < 1:3253702/100‑1 (MQ=255) ggCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCg < 2:1761130/100‑1 (MQ=255) ggCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCg < 1:3201577/100‑1 (MQ=255) ggCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCg > 1:2833952/1‑100 (MQ=255) tCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaa < 2:1943820/100‑1 (MQ=255) cATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaag > 2:2121152/1‑100 (MQ=255) cATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaag > 1:990341/1‑100 (MQ=255) aTCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaaga < 1:1655440/100‑1 (MQ=255) tCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaagaa > 2:2709506/1‑100 (MQ=255) cTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaagaag > 2:1158440/1‑100 (MQ=255) gAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGtt < 2:1342492/100‑1 (MQ=255) aaGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTg < 1:1709778/100‑1 (MQ=255) aaGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTg < 1:2713476/100‑1 (MQ=255) aaGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTg < 2:1467306/100‑1 (MQ=255) aGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGa < 2:2373366/100‑1 (MQ=255) gCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGTAGTTGaa < 2:1232531/100‑1 (MQ=255) gCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTGCCTGGCGTAACCAAGAAGTTGaa < 2:1178580/100‑1 (MQ=255) cACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGcaggcctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgc > 1:2346358‑M1/1‑47 (MQ=255) aCCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATg < 2:2612005/100‑1 (MQ=255) ccGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGc > 1:2537972/1‑100 (MQ=255) ccGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGc > 2:2426065/1‑100 (MQ=255) cGATAGTTAATGCGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGcc > 1:1790485/1‑100 (MQ=255) gATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGACGTTGAATGCCa > 1:1021687/1‑100 (MQ=255) aTAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGGCCTGCtcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcag > 1:2959584‑M2/1‑48 (MQ=255) aGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGt > 1:1899690/1‑100 (MQ=255) gTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGcaggcctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatg > 2:1206842‑M1/1‑39 (MQ=255) ttAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTc < 2:954923/100‑1 (MQ=255) tAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCa < 2:3141170/100‑1 (MQ=255) aaTACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAg > 1:1041303/1‑100 (MQ=255) aTACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGt < 1:812633/100‑1 (MQ=255) aTACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGt > 1:3379664/1‑100 (MQ=255) aCGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTa < 2:2635887/100‑1 (MQ=255) gCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAAc < 2:203527/100‑1 (MQ=255) ccTGAAGATTACTGAACATTAATGATGAcaggcctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccga > 1:2863845‑M1/1‑29 (MQ=255) tGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGtt < 2:2202213/100‑1 (MQ=255) atcctgcgttttAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGc < 2:1861056/90‑1 (MQ=255) tACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCg < 1:1409597/100‑1 (MQ=255) tGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGAcc > 2:718316/1‑100 (MQ=255) tGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGAcc < 1:3246358/100‑1 (MQ=255) gAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCg > 2:1503214/1‑100 (MQ=255) gAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCg < 1:3316652/100‑1 (MQ=255) aaCATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGt < 2:2826908/100‑1 (MQ=255) aCATTAATGATGAcaggcctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttaccttt > 1:185905‑M1/1‑14 (MQ=255) aCATTAATGATGAcaggcctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttaccttt > 1:2630820‑M1/1‑14 (MQ=255) aCATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtcttagctatccgtgcttcagatgaatctgccgatacgatcttaccttt < 1:2181693‑M2/100‑82 (MQ=255) aCATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTg < 2:2991556/100‑1 (MQ=255) aCATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTg < 1:838628/100‑1 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 2:324299‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 1:675291‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 2:1017161‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 2:1238100‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGa > 2:3408676/1‑100 (MQ=255) cATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGa > 1:1612550/1‑100 (MQ=255) ttAATGATGAGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcct > 1:1403380‑M1/1‑11 (MQ=255) ttAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcct < 2:1525243‑M2/100‑85 (MQ=255) ttAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACg > 2:416765/1‑100 (MQ=255) tAATGATGAGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctg < 1:247593‑M1/100‑91 (MQ=255) tAATGATGAGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctg > 2:399953‑M1/1‑10 (MQ=255) tAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctg < 1:1947582‑M2/100‑86 (MQ=255) tAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGa > 1:937878/1‑100 (MQ=255) aaTGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAg < 2:1292081/100‑1 (MQ=255) aaTGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAg > 2:156366/1‑100 (MQ=255) atgatgAGgcctgctcatcattaatgttcagtaatcttcagggcgtattacctatcggtgcttcagatgaatctgccgatacgatcttacctttcctgt > 1:1985239‑M1/1‑8 (MQ=255) tgatgaGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctgtta < 1:1600392‑M1/100‑94 (MQ=255) tgatgaGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctgtta < 1:2840291‑M1/100‑94 (MQ=255) tgatgaG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatatgccgatacgatcttacctttcctgtta < 1:1527893‑M2/100‑89 (MQ=255) gatgaGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctgttaa > 1:1208601‑M1/1‑6 (MQ=255) tgaG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAAc < 2:1779657/100‑1 (MQ=255) gaGgcctgctcatcattaatgttcagtaatcttcagggcgtattacctatcggtgcttcagatgaatctgccgatacgatcttacctttcctgttaaatc > 2:1677600‑M1/1‑3 (MQ=255) gaGgcctgctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctgttaaatc < 1:319871‑M1/100‑98 (MQ=255) g‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGt < 1:2121141/100‑1 (MQ=255) g‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGt < 1:620028/100‑1 (MQ=255) | ACTCACGCGATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGT > NC_000913/2406276‑2406474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |