| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2406375 | 107 (0.870) | 19 (0.180) | 13/156 | NT | 16.1% | coding (267/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| ? | NC_000913 | = 2406380 | 104 (0.960) | coding (262/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes | |||||
Only 100 of 158 total aligned reads displayed.
GATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTT > NC_000913/2406284‑2406479 | gATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctc > 1:1933729‑M2/1‑97 (MQ=255)gATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctc < 1:319871‑M2/100‑4 (MQ=255) ttAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatc > 1:1208601‑M2/1‑94 (MQ=255) tAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatca < 1:2840291‑M2/100‑8 (MQ=255) tAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatca < 1:1600392‑M2/100‑8 (MQ=255) aaCAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatcat < 2:553813‑M2/100‑9 (MQ=255) aCAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatcatt < 2:54760‑M2/100‑10 (MQ=255) aCAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGGTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatcat > 1:1985239‑M2/1‑91 (MQ=255) cAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCctcatcatta < 1:247593‑M2/100‑11 (MQ=255) ggAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTaaa > 2:1655447/1‑100 (MQ=255) ggAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTaaa > 2:1170027/1‑100 (MQ=255) gAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTaaaa < 2:2994694/100‑1 (MQ=255) gAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTaaaa < 2:2277811/100‑1 (MQ=255) aaaGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGGCCTGCtcatcattaatgt > 1:185905‑M2/1‑87 (MQ=255) aaaGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAAc < 2:1270144/100‑1 (MQ=255) aaGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACg < 1:2942370/100‑1 (MQ=255) ggTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCa > 1:1077259/1‑100 (MQ=255) gTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAg < 1:2835500/100‑1 (MQ=255) gTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAg > 2:1761165/1‑100 (MQ=255) gTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAg < 1:3148065/100‑1 (MQ=255) gTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAg < 2:1048938/100‑1 (MQ=255) aaGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑GCCTGctcatcattaatgttcagt > 1:3282258‑M2/1‑80 (MQ=255) cGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGAtttt > 1:2480900/1‑99 (MQ=255) gTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTcc > 2:2224748/1‑100 (MQ=255) gTATCGGCAGATTCATCTGAAGCACCGATAGCTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTcc < 1:2303205/100‑1 (MQ=255) ggCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCg < 1:3201577/100‑1 (MQ=255) ggCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCg < 2:1761130/100‑1 (MQ=255) cATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑GCCTGctcatcattaatgttcagtaatcttcagggcgtattaac > 2:1206842‑M2/1‑61 (MQ=255) cATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaag > 2:2121152/1‑100 (MQ=255) cATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaag > 1:990341/1‑100 (MQ=255) aTCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaaga < 1:1655440/100‑1 (MQ=255) aTCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaaga > 2:354677/1‑100 (MQ=255) tCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaagaa > 2:2709506/1‑100 (MQ=255) cTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaagaag < 2:2170374/100‑1 (MQ=255) tGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCaagaag < 1:2610263/99‑1 (MQ=255) gAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGtt < 2:1342492/100‑1 (MQ=255) gAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGtt > 2:1075861/1‑100 (MQ=255) aaGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTg < 2:1467306/100‑1 (MQ=255) aaGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTg < 1:2713476/100‑1 (MQ=255) aaGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTg < 1:1709778/100‑1 (MQ=255) aGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGa < 2:2373366/100‑1 (MQ=255) gCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGaa > 2:1321323/1‑100 (MQ=255) gCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTGCCTGGCGTAACCAAGAAGTTGaa < 2:1178580/100‑1 (MQ=255) aCCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATg < 2:2612005/100‑1 (MQ=255) cGATAGTTAATGCGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGcc > 1:1790485/1‑100 (MQ=255) cGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGcc < 2:2391410/100‑1 (MQ=255) gATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGACGTTGAATGCCa > 1:1021687/1‑100 (MQ=255) gATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCa < 2:2430564/100‑1 (MQ=255) aTAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAGGCCTGCtcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcag > 1:2959584‑M2/1‑48 (MQ=255) gTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGtt > 1:1630432/1‑100 (MQ=255) tAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCa < 2:3141170/100‑1 (MQ=255) aaTACGTCCTGAAAATTACTGGACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTCCCTGGCGTAACCAAGGAGTTGCATGCCATGTTCa < 1:402855/99‑1 (MQ=255) aaTACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAg > 1:1041303/1‑100 (MQ=255) aTACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGt > 1:3379664/1‑100 (MQ=255) aCGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTa < 2:2635887/100‑1 (MQ=255) gCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGGATGCCATGTTCAGTTAAc < 2:203526/100‑1 (MQ=255) gCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAAc < 2:203527/100‑1 (MQ=255) ccTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAg < 1:3250230/100‑1 (MQ=255) cTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGt > 1:722690/1‑100 (MQ=255) tGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGtt < 1:1552885/100‑1 (MQ=255) aaGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTttg < 2:973664/100‑1 (MQ=255) aaGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTttg < 1:82099/100‑1 (MQ=255) gATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTttgt > 1:2263753/1‑99 (MQ=255) atcctgcgttttAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGc < 2:1861056/90‑1 (MQ=255) tACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCg < 1:1409597/100‑1 (MQ=255) aCTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCg > 1:6325/1‑99 (MQ=255) cTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGa > 1:3330045/1‑99 (MQ=255) cTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGAc < 2:1467515/100‑1 (MQ=255) cTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGAc < 1:1158436/100‑1 (MQ=255) tGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGAcc > 2:718316/1‑100 (MQ=255) tGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGAcc < 1:3246358/100‑1 (MQ=255) aaCATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGt < 2:2826908/100‑1 (MQ=255) aCATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTg < 1:838628/100‑1 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 2:324299‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 2:1238100‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 2:1017161‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttc < 1:1273553‑M2/100‑83 (MQ=255) cATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGa > 2:3408676/1‑100 (MQ=255) ttAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcct < 2:2225791‑M2/100‑85 (MQ=255) ttAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcct < 2:1525243‑M2/100‑85 (MQ=255) ttAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACg > 1:2111560/1‑100 (MQ=255) ttAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACg > 2:416765/1‑100 (MQ=255) ttAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACg < 2:1841707/100‑1 (MQ=255) tAATGATGAG‑CAGGCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctg < 1:1947582‑M2/100‑86 (MQ=255) tAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGa > 1:937878/1‑100 (MQ=255) aaTGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAg > 2:156366/1‑100 (MQ=255) aaTGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAg < 2:937880/100‑1 (MQ=255) tgatgaG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCg > 1:1717189/1‑100 (MQ=255) tgatgaG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCg > 1:2764813/1‑100 (MQ=255) tgatgaG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCg < 2:739279/100‑1 (MQ=255) aG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACa > 2:870043/1‑99 (MQ=255) g‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGt < 1:620028/100‑1 (MQ=255) g‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGt < 1:2121141/100‑1 (MQ=255) aGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTc > 2:2707113/1‑100 (MQ=255) ggCctcatcattaatgttcagtaatcttcagggcgtattaactatcggtgcttcagatgaatctgccgatacgatcttacctttcctgttaaatcgcgtg > 2:2959601‑M2/1‑3 (MQ=255) ggCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCt > 2:1890367/1‑100 (MQ=255) ggCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCt > 1:767895/1‑100 (MQ=255) ggCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCt > 1:186442/1‑100 (MQ=255) gCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTc < 1:3322818/98‑1 (MQ=255) gCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCtt > 1:752029/1‑100 (MQ=255) | GATTTAACAGGAAAGGTAAGATCGTATCGGCAGATTCATCTGAAGCACCGATAGTTAATACGCCCTGAAGATTACTGAACATTAATGATGAG‑CAGGCCTCATCATTAAAACGCAGGATTTTCCTGGCGTAACCAAGAAGTTGAATGCCATGTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTT > NC_000913/2406284‑2406479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |