New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4611259 =102 (1.180)4 (0.050) 3/162 NT 4.2% intergenic (+256/‑137) prfC/osmY peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein
?NC_000913 4611304 = 89 (1.130)intergenic (+301/‑92) prfC/osmY peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein
Rejected: Frequency below cutoff threshold.

Only 100 of 145 total aligned reads displayed.

TCTAAAGCCGTCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATGACTAT  >  NC_000913/4611205‑4611403
                                                                                                   |                                                                                                   
 cTAAAGCCGTCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGa                                                                                                    <  1:245194/100‑1 (MQ=255)
  tAAAGCCGTCGATTGTCATTCTACCGATATGAAAAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGAGACCATTGAc                                                                                                   >  2:1579364/1‑100 (MQ=255)
  aacacgaggttgcattgctgaatagggagagacttcaccctctacagaagtcAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGAc                                                                                                   >  1:1129210‑M1/53‑100 (MQ=255)
   acacgaggttgcattgctgaatagggagagacttcaccctctacagaagtcAATGGTCGTTATTCATCACTCATCGCTTTTTTGATGGCGACCATTGACt                                                                                                  >  2:192245‑M1/52‑100 (MQ=255)
   aaaGCCGTCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACt                                                                                                  <  2:1793571/100‑1 (MQ=255)
    aaGCTGTCGATTGTCATGCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATTACTCATCGCTTTTGTGATGGAGACCATTGAc                                                                                                   <  2:434429/98‑1 (MQ=255)
      gCCGTCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCt                                                                                               >  1:655872/1‑100 (MQ=255)
         gTCGATTGTCATTCTACCGATATTAATAACTGATTCAGATGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTTATGGCGACCATTGACTTCTGTa                                                                                            <  2:455530/100‑1 (MQ=255)
         gTCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTa                                                                                            <  1:1264793/100‑1 (MQ=255)
          tCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTag                                                                                           >  1:580838/1‑100 (MQ=255)
            gATTGTCATTCTACCGATATTAATAACTGATTGAGAGGATGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTa                                                                                            >  2:466759/1‑97 (MQ=255)
             aTTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAgg                                                                                        <  2:1181226/100‑1 (MQ=255)
              ttttCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCTCTTTTGTGATGGCGACCATTGACTTCTGTAGAgg                                                                                        <  2:83420/96‑1 (MQ=255)
              ttGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAggg                                                                                       <  2:742765/100‑1 (MQ=255)
              ttGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAggg                                                                                       >  1:453548/1‑100 (MQ=255)
               tGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGt                                                                                      <  1:387697/100‑1 (MQ=255)
                   aTTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTTTAGAGGGTGa                                                                                    >  1:2150354/1‑98 (MQ=255)
                   aTTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGaa                                                                                   <  1:529236/99‑1 (MQ=255)
                    ttCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGt                                                                                 <  2:162171/100‑1 (MQ=255)
                     tCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTTTGTAGAGGGTGAAGtc                                                                                >  1:188106/1‑100 (MQ=255)
                     tCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGtc                                                                                <  1:1922869/100‑1 (MQ=255)
                         ccGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGtctctc                                                                            <  1:1299881/100‑1 (MQ=255)
                           gATATTAATAACTGATTCAGAGGCTGTAATTGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTcct                                                                          <  2:426600/100‑2 (MQ=255)
                           gATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTccc                                                                          <  1:1739755/100‑1 (MQ=255)
                           gATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTccc                                                                          <  2:1807259/100‑1 (MQ=255)
                           gATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTccc                                                                          >  1:2052419/1‑100 (MQ=255)
                            atatTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCt                                                                         >  1:836566/1‑100 (MQ=255)
                               ttAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTAtt                                                                      >  1:485965/1‑100 (MQ=255)
                                taataaCTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGCCCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTc                                                                     <  2:1477276/100‑1 (MQ=255)
                                taataaCTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTc                                                                     >  2:819479/1‑100 (MQ=255)
                                taataaCTGATTCAGAGGCTGTAATGGTCGTGATTCATCACTCATCGCTTTTGGTATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTccc                                                                          <  1:2174916/95‑1 (MQ=255)
                                 aataaCTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCa                                                                    <  2:1533156/100‑1 (MQ=255)
                                   ttccgatctCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGc                                                                  <  1:1133944/92‑1 (MQ=255)
                                   taaCTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGc                                                                  <  1:570048/100‑1 (MQ=255)
                                    aaCTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCa                                                                 <  1:1411837/100‑1 (MQ=255)
                                      cTGATTCAGAGGCTGTAATGGTAGGGATGAATAACTCATCGATGTGGTGAGGGCGACGGTGGACTTCTGTAGAGGTTGAATGCGCTCCCTATTCAGCaa                                                                >  2:1393851/1‑99 (MQ=255)
                                       tGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATg                                                              <  2:653983/100‑1 (MQ=255)
                                        gATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGc                                                             >  2:1710933/1‑100 (MQ=255)
                                        gATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGc                                                             >  1:1212599/1‑100 (MQ=255)
                                         aTTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCa                                                            <  2:2241919/100‑1 (MQ=255)
                                            cAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAAcc                                                         <  1:1771119/100‑1 (MQ=255)
                                              gagGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTc                                                       >  2:1293810/1‑100 (MQ=255)
                                                  agtcaatggtcgccatcacaaaagcgatgagtgatgaataacgaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgtgt                                                   >  1:778382‑M2/50‑100 (MQ=255)
                                                  agtcaatggtcgccatcaaaaaagcgatgagtgatgaataacgaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCgtgt                                                   >  2:192245‑M2/50‑100 (MQ=255)
                                                   tGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGAATTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAAcacgaggtt                                                  <  2:728864/100‑9 (MQ=255)
                                                    gTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTg                                                 >  1:1538840/1‑100 (MQ=255)
                                                      aatggtcgccatcacaaaagcgatgagtgatgaataacgaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGcc                                               >  1:935065‑M2/46‑100 (MQ=255)
                                                      AATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGTGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGcc                                               >  2:1117777‑M1/1‑100 (MQ=255)
                                                       ATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCa                                              <  2:1414013‑M1/100‑1 (MQ=255)
                                                       ATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCa                                              >  2:1089188‑M1/1‑100 (MQ=255)
                                                        TGGTCGTTATTCATCACTCTTCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAg                                             >  1:744391‑M1/1‑100 (MQ=255)
                                                         GGTCGTTATTCATCACACATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAgg                                            <  2:1062252‑M1/100‑1 (MQ=255)
                                                             gTTATTCATCACGCATCGCTGTTGTGATGGCGACCATTGACTTCTGTAGCCGGTGAAGTCTGTCCCTATTCAGCAATGCAGCCTCCTGttccaagcatca                                        >  2:895912/1‑90 (MQ=255)
                                                             GTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCa                                        <  1:1280201‑M1/100‑1 (MQ=255)
                                                               tATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCaaa                                      <  2:1271256/100‑1 (MQ=255)
                                                               tATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCaaa                                      >  2:2073244/1‑100 (MQ=255)
                                                                aTTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAAt                                     >  2:1602682/1‑100 (MQ=255)
                                                                aTTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACC‑CGTGTTGCCAGGCTCAAAtt                                    >  2:547752/1‑100 (MQ=255)
                                                                  tcatcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTa                                   <  1:966818/100‑1 (MQ=255)
                                                                   catctCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc                                  <  2:1347169/100‑1 (MQ=255)
                                                                   catcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc                                  >  1:2300362/1‑100 (MQ=255)
                                                                   catcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc                                  >  1:2299847/1‑100 (MQ=255)
                                                                    atcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTAc                                  >  2:1387218/1‑99 (MQ=255)
                                                                     tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGa                                <  2:668201/100‑1 (MQ=255)
                                                                     tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGa                                >  2:2224838/1‑100 (MQ=255)
                                                                     tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGa                                >  1:96061/1‑100 (MQ=255)
                                                                     tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGa                                <  1:1923980/100‑1 (MQ=255)
                                                                     tcaCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGa                                <  1:1823668/100‑1 (MQ=255)
                                                                       aCTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGc                              <  1:1602702/100‑1 (MQ=255)
                                                                         tCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCaa                            >  1:1312063/1‑100 (MQ=255)
                                                                              gCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATa                       >  1:1354915/1‑100 (MQ=255)
                                                                              gCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATa                       >  1:1892895/1‑100 (MQ=255)
                                                                              gCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATa                       <  2:2288072/100‑1 (MQ=255)
                                                                              gCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAAAATa                       >  1:1512812/1‑100 (MQ=255)
                                                                                ttttGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACa                     <  2:2052397/100‑1 (MQ=255)
                                                                                  ttGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAgg                   <  1:583398/100‑1 (MQ=255)
                                                                                   tgtgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGa                  >  1:642829/1‑100 (MQ=255)
                                                                                   tgtgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGa                  >  1:1991762/1‑100 (MQ=255)
                                                                                    gtgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGaa                 >  1:2400191/1‑100 (MQ=255)
                                                                                     tgATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAAt                >  1:1037197/1‑100 (MQ=255)
                                                                                      gATGGCAACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATa               <  1:1980050/100‑1 (MQ=255)
                                                                                        tGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATaa              <  1:516835/99‑1 (MQ=255)
                                                                                        tGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACATCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATaaa             <  2:145254/100‑1 (MQ=255)
                                                                                         ggCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAAt            >  2:1033052/1‑100 (MQ=255)
                                                                                         ggCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAAt            >  2:1504946/1‑100 (MQ=255)
                                                                                          gCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATc           <  2:2307835/100‑1 (MQ=255)
                                                                                          gCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATc           <  1:1168426/100‑1 (MQ=255)
                                                                                           cgaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATGAATCg          >  2:2401141‑M2/9‑100 (MQ=255)
                                                                                           cgaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCg          >  2:1855335‑M2/9‑100 (MQ=255)
                                                                                           cgaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATACAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCg          <  2:874478‑M2/92‑1 (MQ=255)
                                                                                            gaccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGa         <  1:725885‑M2/93‑1 (MQ=255)
                                                                                              ccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATg       <  2:2255664‑M2/95‑1 (MQ=255)
                                                                                              ccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATg       <  1:1114525‑M2/95‑1 (MQ=255)
                                                                                              ccattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATg       >  1:2213606‑M2/6‑100 (MQ=255)
                                                                                               cattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATc           <  1:334909‑M2/91‑1 (MQ=255)
                                                                                               cattGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACACGAATAAATCGATGa      >  2:1633373‑M2/5‑100 (MQ=255)
                                                                                                attGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATGAc     <  2:2299820‑M2/97‑1 (MQ=255)
                                                                                                attGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATGAc     <  1:2032749‑M2/97‑1 (MQ=255)
                                                                                                 ttGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATGACt    >  1:1917366‑M2/3‑100 (MQ=255)
                                                                                                  tGACTTCTGTAGATGGTGAAGTCTCTACCTATTCAGCAATGCAACCTCGTGTTGCCATTCTCAAATTACGAGCAAACATACAGGAATAAATCGATGACTa   <  2:191209‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCTAAAGCCGTCGATTGTCATTCTACCGATATTAATAACTGATTCAGAGGCTGTAATGGTCGTTATTCATCACTCATCGCTTTTGTGATGGCGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGCAAACATACAGGAATAAATCGATGACTAT  >  NC_000913/4611205‑4611403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.