New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4344880NA (NA)4 (0.040) 4/166 NT NA noncoding (66/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 4344908 NA (NA)noncoding (94/95 nt) RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 145 total aligned reads displayed.

GAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAG  >  NC_000913/4344781‑4344978
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gAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGa                                                                                                    >  2:1724870/1‑100 (MQ=255)
   aGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccg                                                                                                 >  2:1679288‑M1/1‑97 (MQ=255)
    gCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccgg                                                                                                >  1:649552‑M1/1‑96 (MQ=255)
      cTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccggat                                                                                              <  1:2098858‑M1/100‑7 (MQ=255)
      cTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccggat                                                                                              <  2:758929‑M1/100‑7 (MQ=255)
       tGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATa                                                                                             >  1:1671025/1‑100 (MQ=255)
        gACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATaa                                                                                            >  1:1098227/1‑100 (MQ=255)
          cGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAgg                                                                                          >  2:2777373/1‑100 (MQ=255)
               aCAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTc                                                                                     <  2:177109/100‑1 (MQ=255)
               aCAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTc                                                                                     <  1:2075457/100‑1 (MQ=255)
                     cttAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccg                                                                               <  1:156043/98‑1 (MQ=255)
                       tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCAcgccgag                                                                             >  2:156041/1‑98 (MQ=255)
                       tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCA                                                                             <  2:1050191‑M2/100‑1 (MQ=255)
                       tAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCA                                                                             <  2:458750‑M2/100‑1 (MQ=255)
                        aaCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAT                                                                            <  2:163330‑M2/100‑1 (MQ=255)
                        aaCGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCAT                                                                            <  1:2927239‑M2/100‑1 (MQ=255)
                         aCGAAAATGGCCTGATGCGATATGATTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTACAAATTTTGTAGACCGGATAAGGAATTCACGACGCATC                                                                           <  2:358596‑M2/100‑1 (MQ=255)
                            gacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCgg                                                                        >  2:2431800‑M2/34‑100 (MQ=255)
                              cgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                                                      >  1:1627353‑M2/32‑100 (MQ=255)
                              cgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa                                                                      >  2:938567‑M2/32‑100 (MQ=255)
                               gtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt                                                                     >  1:98391‑M2/31‑100 (MQ=255)
                               aTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt                                                                     >  1:928097/1‑100 (MQ=255)
                                tggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTCGCAAATTTTGTAGACCGTATAAAGAATACACACCGCATCCGGCa                                                                      >  1:1504126‑M2/30‑98 (MQ=255)
                                tGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccggatgcggcgtgaattccttatccggtcta                                                                    <  1:1773459‑M1/100‑33 (MQ=255)
                                nggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc                                                                    >  2:1083532‑M2/30‑100 (MQ=255)
                                   ccTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGAccggatgcggcgtgaattccttatccggtctacaa                                                                 <  1:2431790‑M1/100‑36 (MQ=255)
                                    CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaaca                                                                >  2:2488537‑M1/1‑100 (MQ=255)
                                    CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaa                                                                  >  1:1988635‑M1/1‑98 (MQ=255)
                                       ATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAg                                                             >  1:1736743‑M1/1‑100 (MQ=255)
                                        tGCTATATGTTTATCAGTCTACTTCTTTATGTAATGCTTTGGATTTGCAAATTTTGTAGAccggatgcggcgtgaattccttatccggtctacaaaat                                                              <  1:573668‑M1/98‑39 (MQ=255)
                                        TGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGc                                                            <  2:750845‑M1/100‑1 (MQ=255)
                                        TGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGc                                                            >  2:2238198‑M1/1‑100 (MQ=255)
                                         gCGATATGTTTATCAGGCCACGTCTTAATGTAGTGCTTTAGAGTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcg                                                           <  2:2131712/100‑1 (MQ=255)
                                         gCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACaaaac                                                            >  2:2886726/1‑97 (MQ=255)
                                         gCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcg                                                           <  2:3030311/100‑1 (MQ=255)
                                         gCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcg                                                           <  2:2132503/100‑1 (MQ=255)
                                          cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaagatcggaa                                                          >  2:2887641/1‑92 (MQ=255)
                                          cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcgc                                                          >  1:479301/1‑100 (MQ=255)
                                           gATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcaga                                                         >  2:1111412/1‑97 (MQ=255)
                                            atatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCaa                                                        >  2:950444/1‑100 (MQ=255)
                                             tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg                                                       <  2:266786/100‑1 (MQ=255)
                                              atGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACTCCGCATCCGGCATCAAAAAAGCGCAAg                                                       <  2:601362/99‑1 (MQ=255)
                                               tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt                                                     <  1:2663987/100‑1 (MQ=255)
                                                gTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttg                                                    >  1:691846/1‑100 (MQ=255)
                                                 tttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgt                                                   >  1:2029254/1‑100 (MQ=255)
                                                  ttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgtt                                                  >  1:2009527/1‑100 (MQ=255)
                                                   tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa                                                 <  2:479298/100‑1 (MQ=255)
                                                   tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGAAAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa                                                 >  1:305574/1‑100 (MQ=255)
                                                     tcaggccaCGTCTTAATGTAATGCTTTGGCTTTGCAAATTTTGTCGACCGGATAAGGAATTCACGCAGCATCAGGCATCAACAAAGCGCAAGTTGTTATc                                               >  1:1427283‑M2/9‑100 (MQ=255)
                                                     tcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGTTAACGAATTTACGCCGCATACGGCATAAACAAAGCGCAAGTTGTTATc                                               >  1:2548502‑M2/9‑100 (MQ=255)
                                                      caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc                                              >  1:1786626‑M2/8‑100 (MQ=255)
                                                       aggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCg                                             >  2:829398‑M2/7‑100 (MQ=255)
                                                        ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg                                            >  1:295203‑M2/6‑100 (MQ=255)
                                                        ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCAGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg                                            >  2:2743415‑M2/6‑100 (MQ=255)
                                                         gccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGt                                           >  1:174653‑M2/5‑100 (MQ=255)
                                                          ccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGtt                                          <  2:1318186‑M2/97‑1 (MQ=255)
                                                           caCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTa                                         <  1:1784272‑M2/98‑1 (MQ=255)
                                                             cGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATc                                       <  2:800143/100‑1 (MQ=255)
                                                              gTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCa                                      <  1:1843568/100‑1 (MQ=255)
                                                                 ttAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGc                                   >  1:699089/1‑100 (MQ=255)
                                                                 ttAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGc                                   <  2:2292967/100‑1 (MQ=255)
                                                                 ttAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGc                                   >  1:2841939/1‑100 (MQ=255)
                                                                 ttAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGc                                   >  1:966911/1‑100 (MQ=255)
                                                                  taatgtaatgCTTTGGATTTGCAATTTTTGTATACTGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGcc                                  <  1:2360925/100‑1 (MQ=255)
                                                                  taatgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGcc                                  >  2:1326530/1‑100 (MQ=255)
                                                                  taatgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGcc                                  <  1:1730498/100‑1 (MQ=255)
                                                                   aatgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCa                                 >  1:874107/1‑100 (MQ=255)
                                                                     tgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCaaa                               >  1:2987453/1‑100 (MQ=255)
                                                                      gtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAg                              <  2:1264012/100‑1 (MQ=255)
                                                                      gtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAg                              <  1:1982611/100‑1 (MQ=255)
                                                                       taatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAgc                             >  2:2037208/1‑100 (MQ=255)
                                                                       taatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCAGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAg                              >  2:1741272/1‑99 (MQ=255)
                                                                          tgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACACCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAg                              <  2:2634099/96‑1 (MQ=255)
                                                                            cTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGt                        <  1:2841812/100‑1 (MQ=255)
                                                                            cTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAACGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGt                        >  1:795764/1‑100 (MQ=255)
                                                                                 gATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCAGTTATCAAGCCAAAGCGCCGTAGCTg                   >  1:1803540/1‑100 (MQ=255)
                                                                                   tttGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggc                 <  1:1679308/100‑1 (MQ=255)
                                                                                    ttGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcg                <  1:660371/100‑1 (MQ=255)
                                                                                     tGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcgg               >  1:1023052/1‑100 (MQ=255)
                                                                                     tGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcgg               >  1:811679/1‑100 (MQ=255)
                                                                                     tGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcgg               >  2:2659058/1‑100 (MQ=255)
                                                                                      gCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcggc              <  1:163332/100‑1 (MQ=255)
                                                                                       cAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa             >  1:905385/1‑100 (MQ=255)
                                                                                       cAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa             <  2:2177154/100‑1 (MQ=255)
                                                                                       cAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa             >  1:143178/1‑100 (MQ=255)
                                                                                       cAAATTTAGTACACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATGCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa             >  2:1588922/1‑100 (MQ=255)
                                                                                         aaTTTTGTAGACCGGATTAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcggc              <  1:1518972/97‑1 (MQ=255)
                                                                                         aaTTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAAt           >  2:399764/1‑100 (MQ=255)
                                                                                         aaTTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTATTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAAt           >  1:128568/1‑100 (MQ=255)
                                                                                          aTTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGtctacaaaatttgcaaatccaaagcattacataaagaagtagactgataaacatatagca            <  1:573668‑M2/98‑61 (MQ=255)
                                                                                           ttttGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGa         >  1:2411885/1‑100 (MQ=255)
                                                                                            tttGTAGACCGGATAAGGAATTTACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGa         >  2:1680673/1‑99 (MQ=255)
                                                                                             ttGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAACAAAAACGCCGTAGCTGGCGGCAATGaaa       >  1:1284071/1‑100 (MQ=255)
                                                                                                tAGACCGGATAAGGAATTCACGCCGCATCCGGCGTCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcg    >  2:2007030/1‑100 (MQ=255)
                                                                                                tAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcg    >  2:1474703/1‑100 (MQ=255)
                                                                                                 aGACCGGATAAGGAATTCACGCCGCATCCGGtctacaaaatttgcaaatccaaagcaatacattaagacgtggcctgataaacatatcgcatcagacca    <  1:1799338‑M2/99‑69 (MQ=255)
                                                                                                 aGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcga   >  2:5235/1‑100 (MQ=255)
                                                                                                 aGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCAAAAGCAACGTAGCTGGCGGCAATGAAagcga   >  1:1051501/1‑100 (MQ=255)
                                                                                                  gACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag  >  2:1550201/1‑100 (MQ=255)
                                                                                                  gACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag  <  2:215938/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GAAAGCCTGACGTGGACAATAGCTAACGAAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAG  >  NC_000913/4344781‑4344978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.