| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4344880 | NA (NA) | 4 (0.040) | 4/166 | NT | NA | noncoding (66/95 nt) | RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 4344908 | NA (NA) | noncoding (94/95 nt) | RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP327 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 154 total aligned reads displayed.
AAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCA > NC_000913/4344809‑4345007 | gacgtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCgg > 2:2431800‑M2/34‑100 (MQ=255) gtggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt > 1:98391‑M2/31‑100 (MQ=255) aTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCa < 1:1724068/99‑1 (MQ=255) aTGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCAt > 1:928097/1‑100 (MQ=255) nggcctgataaacatatcgcatcaggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATc > 2:1083532‑M2/30‑100 (MQ=255) ttccgatctcGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATca < 1:2887673/91‑1 (MQ=255) CCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaa > 1:1988700‑M1/1‑99 (MQ=255) CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaaca > 2:2488537‑M1/1‑100 (MQ=255) CTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaa > 1:1988635‑M1/1‑98 (MQ=255) ATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAg > 1:1736743‑M1/1‑100 (MQ=255) tctgATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgc < 1:1111422/97‑1 (MQ=255) TGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGc > 2:2238198‑M1/1‑100 (MQ=255) gCGATATGTTTATCAGGCCACGTCTTAATGTAGTGCTTTAGAGTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcg < 2:2131712/100‑1 (MQ=255) gCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcg < 2:2132503/100‑1 (MQ=255) cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATcaagatcggaa > 2:2887641/1‑92 (MQ=255) cGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcgc > 1:479301/1‑100 (MQ=255) gATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAgcaga > 2:1111412/1‑97 (MQ=255) atatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCaa > 2:950444/1‑100 (MQ=255) tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg < 1:1476310/100‑1 (MQ=255) tatGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAg < 2:266786/100‑1 (MQ=255) atGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACTCCGCATCCGGCATCAAAAAAGCGCAAg < 2:601362/99‑1 (MQ=255) tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt < 1:2663987/100‑1 (MQ=255) tGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgtt < 1:2977648/100‑1 (MQ=255) gTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttg > 2:480468/1‑100 (MQ=255) tttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCTGGCATTAACAAAGCGCAAgttg < 2:361956/99‑1 (MQ=255) tttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgt > 1:2029254/1‑100 (MQ=255) tttATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAgttgt < 1:1666262/100‑1 (MQ=255) tATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTa < 2:479298/100‑1 (MQ=255) caggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATcc > 1:1786626‑M2/8‑100 (MQ=255) aggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCg > 2:829398‑M2/7‑100 (MQ=255) ggccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCAGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCgg > 2:2743415‑M2/6‑100 (MQ=255) gccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGt > 1:174653‑M2/5‑100 (MQ=255) ccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGtt < 2:2525239‑M2/97‑1 (MQ=255) ccaCGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGtt < 2:1318186‑M2/97‑1 (MQ=255) gTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCa < 1:1843568/100‑1 (MQ=255) ttAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGc > 1:699089/1‑100 (MQ=255) ttAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGc > 1:966911/1‑100 (MQ=255) taatgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGcc < 2:2974746/100‑1 (MQ=255) taatgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGcc > 2:1326530/1‑100 (MQ=255) atgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCaa > 1:195367/1‑100 (MQ=255) tgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCaaa < 1:1554737/100‑1 (MQ=255) tgtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCaaa > 1:2987453/1‑100 (MQ=255) gtaatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGAATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAg > 2:765223/1‑100 (MQ=255) taatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAgc > 2:2037208/1‑100 (MQ=255) taatgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCAGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAg > 2:1741272/1‑99 (MQ=255) atgCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAgcgc > 2:272956/1‑100 (MQ=255) cTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGt < 1:2841812/100‑1 (MQ=255) ttGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcg < 1:660371/100‑1 (MQ=255) tGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcgg > 1:811679/1‑100 (MQ=255) tGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcgg > 1:1023052/1‑100 (MQ=255) tGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcgg > 2:2659058/1‑100 (MQ=255) gCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcggc > 1:447828/1‑100 (MQ=255) gCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcggc < 1:163332/100‑1 (MQ=255) cAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa < 2:2177154/100‑1 (MQ=255) cAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa > 1:905385/1‑100 (MQ=255) cAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa > 1:143178/1‑100 (MQ=255) cAAATTTAGTACACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATGCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCa > 2:1588922/1‑100 (MQ=255) aaTTTTGTAGACCGGATTAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTggcggc < 1:1518972/97‑1 (MQ=255) aaTTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTATTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAAt > 1:128568/1‑100 (MQ=255) ttttGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGa > 1:2411885/1‑100 (MQ=255) tttGTAGACCGGATAAGGAATTTACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGa > 2:1680673/1‑99 (MQ=255) ttGTAGACCGGATAAGGAATTCACGCCGCATCCGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcagg < 1:2431790‑M2/100‑66 (MQ=255) tGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAag < 1:722589/100‑1 (MQ=255) tAGACCGGATAAGGAATTCACGCCGCATCCGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggcca < 1:1773459‑M2/100‑69 (MQ=255) tAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcg > 2:1474703/1‑100 (MQ=255) aGACCGGATAAGGAATTCACGCCGCATCCGGtctacaaaatttgcaaatccaaagcaatacattaagacgtggcctgataaacatatcgcatcagacca < 1:1799338‑M2/99‑69 (MQ=255) aGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCAAAAGCAACGTAGCTGGCGGCAATGAAagcga > 1:1051501/1‑100 (MQ=255) gACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag > 2:1550201/1‑100 (MQ=255) gACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag < 2:215938/100‑1 (MQ=255) ccGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgagcg > 2:1083780/1‑100 (MQ=255) ccGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgagcg < 2:905379/100‑1 (MQ=255) ccGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAagcgag > 1:2193340/1‑98 (MQ=255) cGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGATATCAAGCCAAAGCGCCGTAGCTCGCGGCAATGAAAgcgagcga > 1:2350552/1‑100 (MQ=255) ggATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGcgagcgag > 2:1802328/1‑100 (MQ=255) aTAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCACTGAAAGCGAGCGAGGa > 2:1773966/1‑100 (MQ=255) aTAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGa < 1:2024018/100‑1 (MQ=255) aaGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAat < 2:1746111/100‑1 (MQ=255) aGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAata > 1:2513496/1‑100 (MQ=255) aGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAata < 2:2020874/100‑1 (MQ=255) aGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAata > 1:2603830/1‑100 (MQ=255) aGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAata < 2:2897815/100‑1 (MQ=255) aGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTAGCGGCAATGAAAGCGAGCGAGGAata > 1:1097491/1‑100 (MQ=255) ggAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAatat > 2:910184/1‑100 (MQ=255) aaTTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCa < 1:1735248/100‑1 (MQ=255) tCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCACCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCAcc > 1:1416410/1‑99 (MQ=255) cACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACcgt > 2:2980130/1‑100 (MQ=255) cACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACcgt > 1:2698056/1‑100 (MQ=255) cACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACcgt > 1:2522888/1‑100 (MQ=255) cgcATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTa > 2:874289/1‑100 (MQ=255) gcATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTaa < 2:1133473/100‑1 (MQ=255) aTCCGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccattttcgttagctattgtccacgtcag < 1:2098858‑M2/100‑95 (MQ=255) aTCCGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccattttcgttagctattgtccacgtcag < 2:758929‑M2/100‑95 (MQ=255) tCCGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccattttcgttagctattgtccacgtcagn > 2:2398634‑M2/1‑5 (MQ=255) tCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATgc > 1:2817165/1‑100 (MQ=255) ccGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccattttcgttagctattgtccacgtcaggc > 1:649552‑M2/1‑4 (MQ=255) ccGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccattttcgttagctattgtccacgtcagg < 2:606666‑M2/99‑96 (MQ=255) cGGtctacaaaatttgcaaatccaaagcattacattaagacgtggcctgataaacatatcgcatcaggccattttcgttagctattgtccacgtcaggct > 2:1679288‑M2/1‑3 (MQ=255) cGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATTAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATgcgc < 1:415543/100‑1 (MQ=255) ggCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGcc < 1:2743447/100‑1 (MQ=255) gCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCa < 1:377164/100‑1 (MQ=255) | AAAATGGCCTGATGCGATATGTTTATCAGGCCACGTCTTAATGTAATGCTTTGGATTTGCAAATTTTGTAGACCGGATAAGGAATTCACGCCGCATCCGGCATCAACAAAGCGCAAGTTGTTATCCGGTTATCAAGCCAAAGCGCCGTAGCTGGCGGCAATGAAAGCGAGCGAGGAATATCACCGTCGTTAATGCGCCA > NC_000913/4344809‑4345007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |