BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4103511 =	NA (NA)	6 (0.060)	5/164	NT	NA	noncoding (5/84 nt)	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4103544 =	NA (NA)	6 (0.060)	5/164	NT	NA	noncoding (38/84 nt)	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 148 total aligned reads displayed.

CCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAA  >  NC_000913/4103445‑4103643

ccGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCa                                                                                                     <  1:667916/100‑1 (MQ=255)

ccGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCa                                                                                                     >  1:2807840/1‑100 (MQ=255)

  agttaaacttcgcatttgcaggcagtttaaggcgtttacgccgcatccggcatttgagcaggatGCCTGATAATACGCTATCAGCGTCGCATCAGGCAt                                                                                                    >  2:1124147‑M1/65‑99 (MQ=255)

    cTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATAAGCGTCGCATCAGGCATCCt                                                                                                 >  1:860849/1‑100 (MQ=255)

      gAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGc                                                                                               <  2:1218877/100‑1 (MQ=255)

      gAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGc                                                                                               >  2:133345/1‑100 (MQ=255)

        gCGGCAAGATCGATGATTTTTTTCGTCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                             <  1:1035576/100‑1 (MQ=38)

        gCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                             >  1:238641/1‑100 (MQ=255)

          ggCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATAAGCGTCGCAGCAGGCATCCAGCTcca                                                                                           >  2:2475816/1‑98 (MQ=37)

           gCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCa                                                                                            <  1:317444/98‑1 (MQ=255)

            cAAGATCGAAGTTTTTTCCCGTCGGTTGTGGGGAGAATAACCCGCGGTGTTTAGGGCTGATAAGTTGCTAGCAGCGTCGCATCAGGCATCCTGc                                                                                               >  2:1647959/1‑94 (MQ=255)

            cAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAAt                                                                                         <  2:2360064/100‑1 (MQ=255)

             aaGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATg                                                                                        >  2:1697711/1‑100 (MQ=255)

               gATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGcc                                                                                      >  2:343837/1‑100 (MQ=255)

               gATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGcc                                                                                      >  1:1826990/1‑100 (MQ=255)

               gATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGcc                                                                                      >  2:1050407/1‑100 (MQ=255)

               gATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAAACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGcc                                                                                      >  1:1685802/1‑100 (MQ=255)

                aTCGAATATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGcc                                                                                      >  2:1540127/1‑99 (MQ=255)

                aTCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCg                                                                                     >  2:2228955/1‑100 (MQ=255)

                  cGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGa                                                                                   <  2:68619/100‑1 (MQ=255)

                  cGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGa                                                                                   >  2:860346/1‑100 (MQ=255)

                  cGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGACATCCTGCTCAAATGCCGGa                                                                                   >  1:1986853/1‑100 (MQ=255)

                     aGATTTTTCCCTCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgc                                                                                <  2:906136/100‑1 (MQ=255)

                       aTTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATTAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcgg                                                                              <  2:1777789/100‑1 (MQ=255)

                       aTTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcgg                                                                              <  1:1585177/100‑1 (MQ=255)

                        tttttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcggt                                                                             >  2:2808178/1‑99 (MQ=255)

                          tttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGt                                                                           >  1:1952626/1‑100 (MQ=255)

                           ttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTa                                                                          <  1:346722/100‑1 (MQ=255)

                              ccgccgGTTGTGGGGAAAATAATCTCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAAc                                                                       <  1:1308503/100‑1 (MQ=255)

                              ccgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAAc                                                                       >  2:2334759/1‑100 (MQ=255)

                               cgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACg                                                                      <  2:1785026/100‑1 (MQ=255)

                               cgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACg                                                                      >  1:1304719/1‑100 (MQ=255)

                                gccgGTTGTGGGGAAAATAACCCCCTGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGc                                                                     <  1:2803297/100‑1 (MQ=255)

                                gccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGc                                                                     >  2:823035/1‑100 (MQ=255)

                                 ccgGTTGTGGGGAAAATAACCCCCGGATTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGcn                                                                    <  2:1451880/100‑2 (MQ=255)

                                 ccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGcc                                                                    <  2:1599275/100‑1 (MQ=255)

                                     ttGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTAt                                                                <  2:1442894/100‑1 (MQ=255)

                                      tgtgGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATc                                                               >  1:1575926/1‑100 (MQ=255)

                                      tgtgGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATc                                                               <  2:2780451/100‑1 (MQ=255)

                                       gtgGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcc                                                              <  2:2935676/100‑1 (MQ=255)

                                        tgGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcct                                                             <  1:2452774/100‑1 (MQ=255)

                                         ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctg                                                            >  1:453462/1‑100 (MQ=255)

                                         ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctg                                                            >  1:485467/1‑100 (MQ=255)

                                         ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctg                                                            >  1:485549/1‑100 (MQ=255)

                                         ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctg                                                            >  2:2557680/1‑100 (MQ=255)

                                         ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctg                                                            >  1:1205971/1‑100 (MQ=255)

                                         ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTACCAGCGGTGCATCAGGCATCCTGCTCAAATGACGGATGCGGCGTAAACGCCTTATcctg                                                            <  2:765588/100‑1 (MQ=21)

                                          gggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgc                                                           >  1:2928287/1‑100 (MQ=255)

                                          gggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCCCATCAGGCATCCTGCTCCAATGCCGGATGCGGCGTCACAGCCTTCTcct                                                             >  1:2928288/1‑98 (MQ=25)

                                           ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                          <  1:305924/100‑1 (MQ=255)

                                           ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                          >  2:2163149/1‑100 (MQ=255)

                                           ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                          >  1:1261892/1‑100 (MQ=255)

                                            gAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcct                                                         <  1:819279/100‑1 (MQ=255)

                                            gAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                          <  1:1249466/99‑1 (MQ=255)

                                            gAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCAGGATGCGGCGTAAACGCCTTATcctgcct                                                         >  2:2573865/1‑100 (MQ=255)

                                              aaaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACACCTTATCctgcctgc                                                       >  1:3045588/1‑100 (MQ=255)

                                               aaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCa                                                      >  1:86849/1‑100 (MQ=255)

                                                    cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGc                                                 >  2:425619/1‑100 (MQ=255)

                                                      cccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGa                                               >  2:406385/1‑100 (MQ=255)

                                                        cGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGTATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAg                                             <  1:800230/100‑1 (MQ=255)

                                                        cGGAGTGTAGGATTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCTTTATCCTGCCTGCAAATGCGAAg                                             <  2:2019432/100‑1 (MQ=255)

                                                         ggAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAg                                             >  2:319055/1‑99 (MQ=255)

                                                           aGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGTATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCTTGCCTGCAAATGCGAAGtt                                           <  2:574559/99‑1 (MQ=255)

                                                           aGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGttt                                          <  1:169138/100‑1 (MQ=255)

                                                            gtgtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTa                                         <  1:2517960/100‑1 (MQ=255)

                                                            gtgtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTa                                         <  1:1799684/100‑1 (MQ=255)

                                                              ggatgcctgatgcgacgctgatagcgtcttatcaggcATCCTGCTCAAATGCCGGATGCGACGTAAACACCTTATACTACCTGCAAATGCGAAGTTTAAc                                       >  1:2029339‑M2/38‑100 (MQ=255)

                                                                atgcctgatgcgacgctgatagcgtattatcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTAAACTGCCTGCAAATGCGAAGTTTAACt                                      >  2:1124147‑M2/36‑99 (MQ=255)

                                                                 ggCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc                                    >  1:58153/1‑100 (MQ=255)

                                                                 ggCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc                                    >  1:2285438/1‑100 (MQ=255)

                                                                 ggCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc                                    >  1:1497268/1‑100 (MQ=255)

                                                                 ggCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc                                    >  2:579903/1‑100 (MQ=255)

                                                                 ggCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc                                    >  2:1369944/1‑100 (MQ=255)

                                                                  GCCTGATAAGAAGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCCGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCg                                   >  2:2661581‑M1/1‑100 (MQ=255)

                                                                    CTGATAAGACGCTATCAGCGTCTCATCAGGTATCCTGCTTAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCt                                 >  1:1073850‑M1/1‑100 (MQ=255)

                                                                    CTGATAAGACGCTATCAGCGTCGCATAAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCt                                 <  1:1840668‑M1/100‑1 (MQ=255)

                                                                     cgatctgACGCTATCAGCGTCGCAGCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCtt                                <  2:2699382/94‑1 (MQ=255)

                                                                     TGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCtt                                <  1:707031‑M1/100‑1 (MQ=255)

                                                                      gatgcgacgctgatagcgtcttatcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTta                               >  1:1468305‑M2/30‑100 (MQ=255)

                                                                      GATAAGACGCTATCAGCGTCGCATCAGGTATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTta                               >  1:2515371‑M1/1‑100 (MQ=255)

                                                                        tgcgacgctgatagcgtcttatcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTtata                             >  1:1681132‑M2/28‑100 (MQ=255)

                                                                        TAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTtata                             <  2:497441‑M1/100‑1 (MQ=255)

                                                                           gACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAg                          >  2:1186835/1‑100 (MQ=255)

                                                                           gACGCCATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCAAAGTTTAACTCCGCTTATACAg                          >  1:2113620/1‑100 (MQ=255)

                                                                              gCTATCAGCGTCGTATCAGGCATCCTGTTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCgg                       <  1:1155373/100‑1 (MQ=255)

                                                                              gCTATCAGCGTCGCATCATGCATCCTGCTCAAATTCCTTATGCTGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCgg                       <  1:2461658/100‑1 (MQ=37)

                                                                                  tCAGCGTCGCATCAGGCATCCTGCTTAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAAc                   <  1:2436791/100‑1 (MQ=255)

                                                                                  tCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAAc                   <  2:51648/100‑1 (MQ=255)

                                                                                   cAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAAcc                  <  1:860350/100‑1 (MQ=255)

                                                                                   cAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAAcc                  <  1:876360/100‑1 (MQ=255)

                                                                                    aGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCa                 >  1:799490/1‑100 (MQ=255)

                                                                                      cGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCaaa               >  1:383305/1‑100 (MQ=255)

                                                                                          gCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc           <  1:590847/100‑1 (MQ=255)

                                                                                            atcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCa         >  1:1201410‑M2/8‑100 (MQ=255)

                                                                                              caggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGc       >  1:2785909‑M2/6‑100 (MQ=255)

                                                                                                ggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCg     <  2:2261293‑M2/97‑1 (MQ=255)

                                                                                                 gcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGt    >  1:940612‑M2/3‑100 (MQ=255)

                                                                                                  cATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTa   >  2:2932080‑M2/2‑100 (MQ=255)

                                                                                                   aTCCTGCTCAAATGCCGGATGTGGCGTAAACGCCTTCTCTTGCCTTCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTaa  <  1:2735908/100‑1 (MQ=39)

                                                                                                   aTCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTaa  <  2:707027/100‑1 (MQ=255)

CCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAA  >  NC_000913/4103445‑4103643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.