New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4548883 =102 (1.120)7 (0.090) 5/160 NT 7.8% coding (76/903 nt) fimH minor component of type 1 fimbriae
?NC_000913 4548916 = 73 (0.890)coding (109/903 nt) fimH minor component of type 1 fimbriae
Rejected: Frequency below cutoff threshold.

Only 100 of 102 total aligned reads displayed.

GTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTA  >  NC_000913/4548817‑4549013
                                                                                                   |                                                                                                 
gTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTg                                                                                                   <  1:2375828/100‑1 (MQ=255)
atccacgaccaggttttgccccacattcacgacgggcgcaaggtttacataaacattggcgctgccACCGCCAATGGTACCGCTATCCCTATTGGCGGTg                                                                                                   >  1:1315894‑M1/67‑100 (MQ=255)
 ttattaCCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTgg                                                                                                  <  1:1136285/100‑1 (MQ=255)
 ttattaCCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTgg                                                                                                  <  1:1774551/100‑1 (MQ=255)
  ccacgaccaggttttgccccacattcacgacgggcgcaaggtttacataaacattggcgctgccACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGc                                                                                                 >  1:1831512‑M1/65‑100 (MQ=255)
   cacgaacaggtgttgccccacattcacgacgggcgcaaggtttacataaacattggcgctgccACCGCCAATGGTACCGCCATCCCTATTGGCGGTg                                                                                                   >  1:809935‑M1/64‑97 (MQ=255)
      gaccaggttttgccccacattcacgacgggcgcaaggtttacataaacattggcgctgccACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAgcg                                                                                             >  2:2099706‑M1/61‑100 (MQ=255)
      aCCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCGTGGTCATTCGCCTGTAAAACCGCCAATGGTTCCGTTATCCCTATTGGCGGTGGCcgcg                                                                                             >  2:829725/1‑100 (MQ=255)
       cccTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAgcgc                                                                                            >  1:393379/1‑100 (MQ=255)
       cccTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAgcgc                                                                                            >  1:1422040/1‑100 (MQ=255)
           gTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGCTGCCACCGCCAAt                                                                                        <  2:439236/100‑1 (MQ=255)
           gTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGCTGCCACCGCCAAt                                                                                        <  1:2075084/100‑1 (MQ=255)
             ttGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATGGGCGCTGCCACCGCCAAtag                                                                                      <  2:1563728/100‑3 (MQ=255)
              tGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGtt                                                                                     >  2:807312/1‑100 (MQ=255)
              tGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGtt                                                                                     <  1:1289825/100‑1 (MQ=255)
              tGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGtt                                                                                     <  1:2309935/100‑1 (MQ=255)
              tGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGCTGCCACCGCCAAtagg                                                                                     <  2:827622/100‑4 (MQ=255)
               gCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGttt                                                                                    >  1:293271/1‑100 (MQ=255)
                cTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTa                                                                                   <  1:1596574/100‑1 (MQ=255)
                  gTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATg                                                                                 <  2:7825/100‑1 (MQ=255)
                   tACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGt                                                                                >  1:2257645/1‑100 (MQ=255)
                      tgctgATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTaaa                                                                             <  1:877800/100‑1 (MQ=255)
                        ctgATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAAcc                                                                           <  1:923782/100‑1 (MQ=255)
                           aTGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTg                                                                        <  1:718586/100‑1 (MQ=255)
                           aTGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTg                                                                        >  1:200049/1‑100 (MQ=255)
                            tGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTgc                                                                       >  1:1211183/1‑100 (MQ=255)
                            tGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTgc                                                                       >  2:525146/1‑100 (MQ=255)
                            tGGGCTGGTCGGTAAATGCCAGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTgc                                                                       >  2:1564534/1‑100 (MQ=255)
                              ggCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTgcgc                                                                     >  1:2147698/1‑100 (MQ=255)
                              ggCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTgcgc                                                                     <  1:284731/100‑1 (MQ=255)
                               gCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGcc                                                                    >  1:1424756/1‑100 (MQ=255)
                               gCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTAATGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGcc                                                                    <  2:2238979/100‑1 (MQ=255)
                                  ggTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCcgt                                                                 <  1:197876/100‑1 (MQ=255)
                                   gTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCcgtc                                                                <  1:139837/100‑1 (MQ=255)
                                    tCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATTGTACCGCTATCCCTATTGGCGGAGGCAGCGCCAATGTTTATGTAAACCTTGCGCCcgtcg                                                               <  2:1368427/100‑1 (MQ=255)
                                    tCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCcgtcg                                                               <  2:1876860/100‑1 (MQ=255)
                                      ggTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTg                                                             >  1:988389/1‑100 (MQ=255)
                                      ggTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTg                                                             >  1:788919/1‑100 (MQ=255)
                                      ggTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTg                                                             <  2:293267/100‑1 (MQ=255)
                                      ggTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTg                                                             >  2:1748479/1‑100 (MQ=255)
                                       gTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGa                                                            >  2:400127/1‑100 (MQ=255)
                                        tAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGaa                                                           <  1:75379/100‑1 (MQ=255)
                                        tAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGaa                                                           <  1:2079573/100‑1 (MQ=255)
                                        tAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGaa                                                           <  1:75437/100‑1 (MQ=255)
                                         aaaTGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAAt                                                          >  1:1773105/1‑100 (MQ=255)
                                            tGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAAtgtg                                                       >  2:1750365/1‑100 (MQ=255)
                                              ccTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTggg                                                     >  1:289956/1‑100 (MQ=255)
                                              ccTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTggg                                                     >  1:359863/1‑100 (MQ=255)
                                              ccTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTggg                                                     >  2:793063/1‑100 (MQ=255)
                                              ccTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTggg                                                     <  1:2162978/100‑1 (MQ=255)
                                              ccTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCACGTCGTGAATGTggg                                                     >  1:2519503/1‑100 (MQ=255)
                                              ccTGGTCATTCGCCTCTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTggg                                                     <  1:2524832/100‑1 (MQ=255)
                                               cTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTgggg                                                    <  1:1421404/100‑1 (MQ=255)
                                               cTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTgggg                                                    <  2:52139/100‑1 (MQ=255)
                                                tGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTCAACCTTGCGCCCGTCGTGAATGTGGGGc                                                   >  2:717884/1‑100 (MQ=255)
                                                tGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGc                                                   <  1:956517/100‑1 (MQ=255)
                                                 ggTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATACCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCa                                                  >  2:1367878/1‑100 (MQ=255)
                                                   tCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCaga                                                >  1:1320819/1‑98 (MQ=255)
                                                      ttCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAAcc                                             >  1:651228/1‑100 (MQ=255)
                                                      ttCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAAcc                                             <  1:1792358/100‑1 (MQ=255)
                                                        cGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTg                                           <  2:788912/100‑1 (MQ=255)
                                                         gCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTgg                                          <  2:2147684/100‑1 (MQ=255)
                                                         gCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTgg                                          >  1:45535/1‑100 (MQ=255)
                                                         gCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTgg                                          <  2:1211175/100‑1 (MQ=255)
                                                          ccTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGt                                         >  2:318961/1‑100 (MQ=255)
                                                          ccTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGt                                         <  1:850656/100‑1 (MQ=255)
                                                           cgctgccaccgccaatagggatagcggtaccattggcggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTc                                        >  2:2099706‑M2/41‑100 (MQ=255)
                                                           cTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTc                                        >  1:1591787/1‑100 (MQ=255)
                                                            tGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCg                                       >  2:874593/1‑100 (MQ=255)
                                                             gTAATACCGCCAATGGTCCCGCGACCCCTATTTACCGTGGCAGCTGCTATGGTTACATACACCTTGCGCCCGTCGTGAATGGGGAGCATATCCTGGGCGt                                      <  2:1911809/100‑1 (MQ=255)
                                                              tAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTg                                     <  1:807319/100‑1 (MQ=255)
                                                              tAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTg                                     <  1:793070/100‑1 (MQ=255)
                                                               gccaccgccaatagggatagcggtaccattggcggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTgg                                    >  1:1831512‑M2/37‑100 (MQ=255)
                                                               aaaaCCGCCAATGGTACTGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTgg                                    >  2:2003075/1‑100 (MQ=255)
                                                               aaaaCCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCCATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGttg                                    <  2:682258/100‑3 (MQ=255)
                                                               aaaaCCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTgg                                    >  2:1750947/1‑100 (MQ=255)
                                                                aaaCCGCCAATGGTACCGCTATCCCTATGGGAGGTGGCAGCGCCAATGTTTATGTAAAACTTGCGTTCGCCGTGAATGAGGGGCAAAAAATGGTCGt                                      >  2:543039/1‑97 (MQ=255)
                                                                 caccgccaatagggatggcggtaccattggcggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAACACCTGTTCGTg                                     >  1:809935‑M2/35‑97 (MQ=255)
                                                                 caccgccaatagggatagcggtaccattggcggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGAt                                  >  1:1315894‑M2/35‑100 (MQ=255)
                                                                 aaCCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGAt                                  >  1:314639/1‑100 (MQ=255)
                                                                  accgccaatagggctagcggtacgattggcggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGGGAATGTGGGGCAAAACCTGgtggtg                                     >  2:877569‑M2/34‑96 (MQ=255)
                                                                  accgccaatagggatagcggtaccattggcggtGGCAGCGCCAATGTTTATGTAAACGTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATc                                 >  1:1177450‑M2/34‑100 (MQ=255)
                                                                  ACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATc                                 >  1:945445‑M1/1‑100 (MQ=255)
                                                                   CCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCt                                >  2:1435083‑M1/1‑100 (MQ=255)
                                                                     GCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCttt                              <  1:2381989‑M1/100‑1 (MQ=255)
                                                                      CCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTc                             <  1:337891‑M1/100‑1 (MQ=255)
                                                                      CCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTc                             >  2:653357‑M1/1‑100 (MQ=255)
                                                                         ATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTTGAc                          >  1:1715569‑M1/1‑100 (MQ=255)
                                                                             tACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCaa                      >  1:2477692/1‑100 (MQ=255)
                                                                              aCCGCTATCCCTATTGGCGGTGGCAGCGCCGATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACGTGGTCGTGGATCTTTCGACGCaaa                     <  2:1083758/100‑1 (MQ=255)
                                                                              aCCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCaaa                     <  1:1159108/100‑1 (MQ=255)
                                                                                     tCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTg              <  2:2385647/100‑1 (MQ=255)
                                                                                      cccTATTGGCGGTGGCAGCGCCAATGGTTATGGACTCCTTGCGCCCTTCGTGAATGGTGGGCAAAACCTGGTCGTGTATCTTTCGACGCAAATCTTTTGc             <  2:323699/100‑1 (MQ=255)
                                                                                      cccTATGGGCGGCGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTg              <  1:118581/99‑1 (MQ=255)
                                                                                       ccTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGcc            <  1:294095/100‑1 (MQ=255)
                                                                                        cTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCaaaagatttgcgt           >  1:15752/1‑90 (MQ=255)
                                                                                         cattggcgctGCCACCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCAt          >  1:1065590‑M2/11‑100 (MQ=255)
                                                                                               cggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGAt    <  1:1683624‑M2/96‑1 (MQ=255)
                                                                                                ggtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGAtt   >  1:975016‑M2/4‑100 (MQ=255)
                                                                                                 gtGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTa  <  2:1591776‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
GTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTA  >  NC_000913/4548817‑4549013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.