| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3666120 = | 132 (1.070) | 19 (0.190) | 7/148 | NT | 15.8% | intergenic (‑310/+60) | gadX/gadA | acid resistance regulon transcriptional activator; autoactivator/glutamate decarboxylase A, PLP‑dependent |
| ? | NC_000913 | 3666163 = | 93 (0.910) | intergenic (‑353/+17) | gadX/gadA | acid resistance regulon transcriptional activator; autoactivator/glutamate decarboxylase A, PLP‑dependent | |||||
Only 100 of 194 total aligned reads displayed.
GACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGC > NC_000913/3666021‑3666219 | ctacaaagcctccctgaaatatctcggcgatcaccagaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaa > 1:1861295‑M1/100‑100 (MQ=255)ctacaaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaa < 1:2933592‑M1/1‑1 (MQ=255)ctacaaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaa < 2:1877250‑M1/1‑1 (MQ=255)ctacaaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaa < 2:1388023‑M1/1‑1 (MQ=255) tacaaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaaa < 2:1811615‑M1/2‑1 (MQ=255) cATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAAc > 2:625953/1‑100 (MQ=255) acaaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAAc < 1:1337357‑M1/3‑1 (MQ=255) aTTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAAcc < 1:1638525/100‑1 (MQ=255) aaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCg > 1:2748150‑M1/96‑100 (MQ=255) aaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCg < 2:3191105‑M1/5‑1 (MQ=255) aaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCg > 1:2037781‑M1/96‑100 (MQ=255) aagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGa > 2:506179‑M1/95‑100 (MQ=255) aagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGa < 2:2202417‑M1/6‑1 (MQ=255) aaaGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGaa > 2:1121009/1‑100 (MQ=255) gcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAAt > 1:1918339‑M1/93‑100 (MQ=255) gcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAAt > 2:1783297‑M1/93‑100 (MQ=255) ggTAATCGCTACATTTAATAAACATTCATATAACATATATCTGATCAAAACGATCAATAGACAGGCAATATTTTATTGAGACTAATAAGCAACCGAATGc < 1:426846/100‑1 (MQ=255) ggTAATCGATACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGc < 1:1933170/100‑1 (MQ=255) tccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGcc < 2:673658‑M1/11‑1 (MQ=255) ccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGccc > 2:159507‑M1/89‑100 (MQ=255) ccctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGccc > 1:25436‑M1/89‑100 (MQ=255) ctgaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAg < 1:932576‑M1/14‑1 (MQ=255) tCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTTTGATTAATAAGCAACCAAATCCCCAGc > 1:2893651/1‑100 (MQ=255) tCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGc < 2:1752300/100‑1 (MQ=255) tCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGc < 2:1887259/100‑1 (MQ=255) gaaatatctcagcgatcacccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGc > 1:2302008‑M1/85‑99 (MQ=255) aCATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGttt > 1:767296/1‑100 (MQ=255) ttAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGttttttt < 1:2101343/100‑1 (MQ=255) taataaACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTa < 1:2023853/100‑1 (MQ=255) ataaACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTaaa < 1:468845/100‑1 (MQ=255) cATTCATATAACATATATCTTATCAACACGATGACTACACAGCCAATATATTATTGCGCTTAATAAGCAACCGAATGCCCAGCTGTTTTTTTTACGGCTg > 1:113571/1‑100 (MQ=255) cATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTg < 2:1769291/100‑1 (MQ=255) tCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGc < 2:1989935/100‑1 (MQ=255) ccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGc > 2:1015223‑M1/66‑100 (MQ=255) ccgaaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGc > 2:429352‑M1/66‑100 (MQ=255) cATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCa > 2:2664433/1‑100 (MQ=255) cATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCa < 2:368758/100‑1 (MQ=255) aaactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCAt > 1:1708656‑M1/63‑99 (MQ=255) aactgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTc > 2:1531591‑M1/62‑100 (MQ=255) actgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCg > 1:3079663‑M1/61‑100 (MQ=255) ctgcagggtattgcccagcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCgg > 2:2536925‑M1/60‑100 (MQ=255) ctgcagggtattgaccagcagaacagctttacacacacctgataacataacgttgtaacAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCgg > 2:998655‑M1/60‑100 (MQ=255) aaCATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCgg < 1:1468377/100‑1 (MQ=255) gcagggtattgcccagcagaacagctttaaacacacctgagaacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCGTTCgg > 2:2093000‑M1/58‑98 (MQ=255) cATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGt > 1:1051913/1‑99 (MQ=255) atatCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGttttt < 1:759272/100‑1 (MQ=255) tatCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTa < 2:2771252/100‑1 (MQ=255) tatCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTa < 1:1774668/100‑1 (MQ=255) tatCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTa < 2:877934/100‑1 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc < 2:2971105/100‑1 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc < 1:953495/100‑1 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc > 1:3191077/1‑100 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc > 1:2971079/1‑100 (MQ=255) agcTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc < 1:2055425/98‑1 (MQ=255) tCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACa < 2:1267928/100‑1 (MQ=255) tCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACa > 2:1381218/1‑100 (MQ=255) ttATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAAc < 1:3369566/100‑1 (MQ=255) tATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACg > 2:1196741/1‑100 (MQ=255) tATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACg < 1:1675398/100‑1 (MQ=255) aaCACGATGAATAGACAGCCAATATATTATTGCGATTTATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttat > 1:1814667/1‑100 (MQ=255) aaCACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttat > 1:3253689/1‑100 (MQ=255) aaCACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttat > 2:3003833/1‑100 (MQ=255) aaCACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttat > 2:3252704/1‑100 (MQ=255) gcagaacagctttaaacacacctgataacataacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgt > 2:1468507‑M1/43‑100 (MQ=255) acGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtt < 1:1149994/100‑1 (MQ=255) cGATGACTGGACAGCCAATATATAATTGCGATTAATAAGCAAGCGAATGCCCAGCTGATTTTATAAAGTCTGATGATTCGGTTTTTACACCgttatgtta > 1:1412722/1‑100 (MQ=255) cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtta > 2:2730750/1‑100 (MQ=255) cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtta > 1:49264/1‑100 (MQ=255) cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtta < 2:2558349/100‑1 (MQ=255) tGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCa > 1:2674312/1‑100 (MQ=255) aGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtgt < 1:2976540/100‑1 (MQ=255) gACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtgtg > 2:2138526/1‑100 (MQ=255) cAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGtt < 2:2017983/100‑1 (MQ=255) cAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGtt > 2:1442073/1‑100 (MQ=255) aGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGttt < 2:2366244/100‑1 (MQ=255) gCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTTTTTTTTTGTCTTTCCGTTTTTACAACATTATGTTATAATGTGTGtt > 1:2233697/1‑98 (MQ=255) aaTATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCTGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAg < 2:2394736/100‑1 (MQ=255) atatatTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGc < 2:304173/100‑1 (MQ=255) attattGCAATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGtt < 2:1657657/100‑1 (MQ=255) ttattGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTc > 2:2442491/1‑100 (MQ=255) attGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctg > 1:1877324/1‑100 (MQ=255) attGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctg > 2:1207660/1‑100 (MQ=255) attGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTGTTTACAACGTTCTGTTATCAGGTGTGTTTAAAGCTGTTctg > 1:3009482/1‑100 (MQ=255) tGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctgct < 1:1402781/100‑1 (MQ=255) gCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTTTTTTTTTTTTTTTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctgctg > 1:3200300/1‑100 (MQ=255) taacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTgg > 2:3078603‑M1/13‑100 (MQ=255) aTTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGc < 2:248999/100‑1 (MQ=255) aTTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGc < 1:2445310/100‑1 (MQ=255) ttAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCa < 2:1361893/100‑1 (MQ=255) ttAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCa < 1:1196737/100‑1 (MQ=255) taataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCaa > 1:1685325/1‑100 (MQ=255) aataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGAATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAAt < 2:1843301/100‑1 (MQ=255) ataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATa > 1:2789452/1‑100 (MQ=255) taaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc < 2:171390/100‑1 (MQ=255) taaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc < 2:846725/100‑1 (MQ=255) aaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTTTTTTTTTTTTTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc > 1:1034551/1‑99 (MQ=25) aaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAcc < 2:3362336/100‑1 (MQ=255) aGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAccc < 2:359600/100‑1 (MQ=255) gCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCt < 2:1561566/100‑1 (MQ=255) AACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGc > 1:1293261‑M1/1‑100 (MQ=255) | GACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGC > NC_000913/3666021‑3666219 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |