| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3666120 = | 132 (1.070) | 19 (0.190) | 7/148 | NT | 15.8% | intergenic (‑310/+60) | gadX/gadA | acid resistance regulon transcriptional activator; autoactivator/glutamate decarboxylase A, PLP‑dependent |
| ? | NC_000913 | 3666163 = | 93 (0.910) | intergenic (‑353/+17) | gadX/gadA | acid resistance regulon transcriptional activator; autoactivator/glutamate decarboxylase A, PLP‑dependent | |||||
Only 100 of 183 total aligned reads displayed.
TATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCTTTGTAG > NC_000913/3666065‑3666261 | atatCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGttttt < 1:1930479/100‑1 (MQ=255) tatCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTa < 1:1774668/100‑1 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc < 1:953495/100‑1 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc > 1:2971079/1‑100 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc < 2:2971105/100‑1 (MQ=255) atCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc > 2:1609866/1‑100 (MQ=255) agcTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAc < 1:2055425/98‑1 (MQ=255) tCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACa < 2:1267928/100‑1 (MQ=255) tATCAACACGCTGCATCGACAGCCCATATATTATTGCGATTAATAAACAACCGACTCCCCCGCTGCTTTTTTATACACTGGGCATCCCGTTTTTACAAc > 1:3117268/1‑99 (MQ=255) tATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACg > 2:1196741/1‑100 (MQ=255) tCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgtt > 2:2455169/1‑100 (MQ=255) cAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgtta > 2:493043/1‑100 (MQ=255) cAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgtta < 2:3098372/100‑1 (MQ=255) cAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgtta < 2:1592212/100‑1 (MQ=255) aaCACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttat > 2:3003833/1‑100 (MQ=255) aaCACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGAATTCGGTTTTTACAACgt > 1:3277233/1‑97 (MQ=255) cacGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgt < 2:3040971/100‑1 (MQ=255) cacGATGAATAGACAGCCAAGATATTATTGCGAGTAATAAGCACCCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttat > 1:2642946/1‑98 (MQ=255) cGATGACTGGACAGCCAATATATAATTGCGATTAATAAGCAAGCGAATGCCCAGCTGATTTTATAAAGTCTGATGATTCGGTTTTTACACCgttatgtta > 1:1412722/1‑100 (MQ=255) cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtta > 1:49264/1‑100 (MQ=255) cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtta > 2:2730750/1‑100 (MQ=255) cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgtta < 2:2558349/100‑1 (MQ=255) tGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCa > 1:2674312/1‑100 (MQ=255) gAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAg < 2:1967846/100‑1 (MQ=255) aTAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgt < 1:1058475/100‑1 (MQ=255) tAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtg < 2:630279/100‑1 (MQ=255) gACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtgtg > 2:2138526/1‑100 (MQ=255) gACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCAATAGATATTTACAACGTTATGTTATCAGgtg > 1:3078067/1‑98 (MQ=255) gACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCGGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtgtg > 2:2542340/1‑100 (MQ=255) cAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGtt > 2:1442073/1‑100 (MQ=255) cAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGtt < 2:2017983/100‑1 (MQ=255) cAGCCAATATATTATTGCGAATAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtgtgt > 1:2072606/1‑99 (MQ=255) gCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTTTTTTTTTGTCTTTCCGTTTTTACAACATTATGTTATAATGTGTGtt > 1:2233697/1‑98 (MQ=255) ccAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTaa > 2:2414221/1‑100 (MQ=255) atatatTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGc < 2:136701/100‑1 (MQ=255) tatatTATTGCGATTAATAAGCAACCTAAGGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGc < 1:451334/99‑1 (MQ=255) tatatTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTGAAg > 1:760124/1‑98 (MQ=255) attattGCAATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGtt < 2:1657657/100‑1 (MQ=255) acataacgttgtaaaaaccgaatgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctgc > 2:1468507‑M2/59‑100 (MQ=255) tGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctgct < 1:1402781/100‑1 (MQ=255) gCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTTTTTTTTTTTTTTTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTctgctg > 1:3200300/1‑100 (MQ=255) taacgttgtaaaAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTgg > 2:3078603‑M1/13‑100 (MQ=255) gATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTggg < 2:1468478/100‑1 (MQ=255) gATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTggg < 2:1882293/100‑1 (MQ=255) taataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCaa > 1:1685325/1‑100 (MQ=255) taataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCaa > 2:1046974/1‑100 (MQ=255) aataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAAt < 2:3262679/100‑1 (MQ=255) ataaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATa > 1:2789452/1‑100 (MQ=255) taaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc > 1:3002088/1‑100 (MQ=255) taaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc < 2:846725/100‑1 (MQ=255) taaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc < 2:171390/100‑1 (MQ=255) aaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTTTTTTTTTTTTTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAc > 1:1034551/1‑99 (MQ=25) aaGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAcc < 2:3362336/100‑1 (MQ=255) aGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAccc > 1:154908/1‑100 (MQ=255) aGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAccc < 2:359600/100‑1 (MQ=255) gCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCt > 2:1851984/1‑100 (MQ=255) AACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGc > 1:1293261‑M1/1‑100 (MQ=255) ccgaatgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAg > 1:1884777‑M2/42‑100 (MQ=255) ccgaatgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAg > 2:3072696‑M2/42‑100 (MQ=255) ccgaatgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGGGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAg > 2:2381943‑M2/42‑100 (MQ=255) ccgaatgcccagcctttaaaaaaacagctgggcattcggttGTTACAACGTTATGTTATCAGGTGTGTGTAAAGCTGTTCTGCTGGTCAATACCCTGCAg > 2:998655‑M2/42‑100 (MQ=255) ccgaacgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTCTCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGc > 2:2093000‑M2/42‑98 (MQ=255) CCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAg > 2:1282582‑M1/1‑100 (MQ=255) CCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAg < 2:1388006‑M1/100‑1 (MQ=255) CCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCAGTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGGTCTGCTGGTCAATACCCTGCAg < 1:2515949‑M1/100‑1 (MQ=255) gaatgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGtt > 2:1531591‑M2/40‑100 (MQ=255) GAATGCCCAGCTGTTTTTTTAAAGGCTGTTCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGtt < 1:3353756‑M1/100‑1 (MQ=255) GAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGtt > 2:320456‑M1/1‑100 (MQ=255) atgcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGttt > 1:1708656‑M2/38‑99 (MQ=255) gcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCgg > 2:734494‑M2/36‑100 (MQ=255) gcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCgg > 2:429352‑M2/36‑100 (MQ=255) gcccagcctttaaaaaaacagctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCgg > 2:2494922‑M2/36‑100 (MQ=255) GCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCgg > 2:523672‑M1/1‑100 (MQ=255) CCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTtcgtg > 2:2286694‑M1/1‑98 (MQ=255) CCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCggg > 2:879303‑M1/1‑100 (MQ=255) CCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCggg > 1:3388377‑M1/1‑100 (MQ=255) AGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTg < 1:2269650‑M1/99‑1 (MQ=255) gTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGc > 1:1352328/1‑100 (MQ=255) atttttttAAAGACTCGGCATTCAGTTTTTACGACCTTATGTTACCAGGTGTTTTTAAAGCTGTTCTGCTGGGCTATCCCCTGCAGTTTCgacggatcac < 1:3003684/99‑10 (MQ=21) tttttttAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCt < 1:3252676/100‑1 (MQ=255) ttAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGat < 2:1340580/100‑1 (MQ=255) aatggCTGGGCATTCGGTTTTTACAACGTTATGTTATCACGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGatat < 1:1171983/97‑1 (MQ=255) aGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATAttt > 2:372441/1‑100 (MQ=255) ggCTGGGCATTTGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTc < 1:2567611/100‑1 (MQ=255) ggCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTc > 1:648640/1‑100 (MQ=255) ggCTGGGCATTCGGGTTTGACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTc < 2:2319181/100‑1 (MQ=255) ctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAg > 1:1779554‑M2/15‑100 (MQ=255) ctgggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAg < 1:932576‑M2/86‑1 (MQ=255) ggcattcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGa > 2:1559748‑M2/12‑100 (MQ=255) attcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGc > 2:1783297‑M2/9‑100 (MQ=255) tcggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCtt < 2:2202417‑M2/94‑1 (MQ=255) cggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCttt < 2:3191105‑M2/95‑1 (MQ=255) cggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCttt > 1:2037781‑M2/6‑100 (MQ=255) cggttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCttt > 1:2748150‑M2/6‑100 (MQ=255) gttTTTACAACGTTCTGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCTCTGAGATATTTCAGGGAGGCTTTGt > 1:2402054‑M2/4‑100 (MQ=255) ttTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCTTTGTa < 2:1811615‑M2/98‑1 (MQ=255) tTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCTGGTGATCGCCGAGATATTTCAGGGAGGCTTTGTAg > 1:1861295‑M2/2‑100 (MQ=255) tTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCTTTGTAg < 2:1209169‑M2/99‑1 (MQ=255) tTTTACAACGTTATGTAATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCTTTGTAg < 1:1137654‑M2/99‑1 (MQ=255) ctttACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCTTTGTAg < 2:653643/99‑1 (MQ=255) | TATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGTGATCGCTGAGATATTTCAGGGAGGCTTTGTAG > NC_000913/3666065‑3666261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |