New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	734168 =	NA (NA)	34 (0.240)	14/166	NT	NA	pseudogene (36/1521 nt)	rhsO	pseudogene, Rhs family
	?	NC_000913	734186 =	NA (NA)					pseudogene (54/1521 nt)	rhsO	pseudogene, Rhs family

TCATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/734272‑734168 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgccCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  NC_000913/734186‑734284                                                                                                                                                                                                              TCATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTAC                                                                                                          <  1:3779976/100‑1 TCATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTAC                                                                                                          <  1:2838960/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  2:3482756/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         >  2:3337124/1‑100  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  2:3074131/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  1:2105387/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  1:2776708/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  2:3693481/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         >  1:1784912/1‑100  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  1:3111247/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  1:1400668/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACC                                                                                                         <  1:3630010/100‑1  CATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTAC                                                                                                          <  2:1242726/99‑1    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGCGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  2:269632/1‑100    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  2:3033958/1‑100    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  1:2709440/1‑100    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  1:3645636/1‑100    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  2:1345457/1‑100    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       <  1:2190544/100‑1    TACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  1:1979109/1‑100     nCCGGTAAAGATAGTGCGCGTTACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTCTACGGGTGCAGCTCAGGGTCGGGCAGGCGGTTACCTG                                                                                                       >  2:2272437/2‑99     ACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGC                                                                                                      >  1:3724240/1‑100      CCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGCC                                                                                                     >  2:1945182/1‑100      CCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGCC                                                                                                     >  2:1369546/1‑100      CCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGCC                                                                                                     >  2:2940987/1‑100      CCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGCC                                                                                                     >  1:3190331/1‑100                  GTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGTAACCGCCTGCCCGACCCGGAGCT                                                                                         <  1:3132422/100‑1                           ACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGA                                                                                <  1:410159/100‑1                                                                             GCTCCGGGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACT                              >  1:1281829/1‑100                                                                              CTCCGGGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTA                             >  1:2443508/1‑100                                                                                CCGGGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATC                           >  1:918044/1‑100                                                                                 CGGGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCT                          >  1:1615903/1‑100                                                                                  GGGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTT                         >  1:3555892/1‑100                                                                                  GGGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCATATCGCCCGTGACGCGCACTATCTT                         >  1:4100042/1‑100                                                                                   GGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTT                        >  1:3002999/1‑100                                                                                   GGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTT                        >  2:2032807/1‑100                                                                                   GGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTT                        >  1:2308180/1‑100                                                                                   GGTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTT                        >  2:268437/1‑100                                                                                    tTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGAGAACCGTATCGCCCGTGACGCGCACGATCGTT                        >  2:3433332/2‑99                                                                                    GTCGGGCAGGCGGTTACCTGCCGGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTA                       >  1:1648819/1‑100                                                                                    GTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTA                       >  1:1991486/1‑100                                                                                    GTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTA                       >  1:989677/1‑100                                                                                    GTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTA                       >  1:3915573/1‑100                                                                                    GTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTA                       >  1:3112870/1‑100                                                                                    GTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTA                       >  1:786090/1‑100                                                                                    GTCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTT                        >  2:1500937/1‑99                                                                                     TCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTAC                      >  2:2297714/1‑100                                                                                     TCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTAC                      >  2:3035588/1‑100                                                                                     TCGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTAC                      >  2:2039081/1‑100                                                                                     TCGGGCAGGCGGTTACCTGCCCGACCCGGAGCCGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTAC                      >  2:758419/1‑100                                                                                      CGGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACC                     >  1:1527581/1‑100                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCGCCCGGACAGCGCCCTCAGCATGTGGCCGGATAAACGTATCGCCCGTGACGCGCACTATCTTTACC                     >  2:2735560/1‑99                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCG                    >  2:2108915/1‑100                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCG                    >  2:355440/1‑100                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCG                    >  1:2134365/1‑100                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCG                    >  1:1127887/1‑100                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCG                    >  1:1002461/1‑100                                                                                       GGGCAGGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAACACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCG                    >  1:1083815/1‑100                                                                                        GGCAGGCGGTTACCTGCCTGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGG                   >  2:2533762/1‑100                                                                                            GGCGGTTACCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATG               >  1:2246512/1‑100                                                                                               aaccACCTGCCCGACCCGGAACTGCACCCGAACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTAACGCCCACTATCTTTACCGATAaaa              >  2:2640524/5‑95                                                                                                   ggCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCAGGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCA        >  1:2823312/3‑100                                                                                                   gaCTGCCCGACCCAGAGCTGCACCCGGACAGGACCCTCAGCAAGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCA        >  1:2812974/3‑100                                                                                                    CCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCAC       >  2:1656302/1‑100                                                                                                    CCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCAC       <  2:1938726/100‑1                                                                                                     CTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACG      <  1:1110469/100‑1                                                                                                      TGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGAGAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGG     >  1:3094268/1‑100                                                                                                      TGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCAGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGG     <  1:190341/100‑1                                                                                                       GCCCGACCCGGAGCTGCACCCGGACCGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTAGGACCGTCACGGC    <  2:3904050/100‑1                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGC    >  1:2844213/1‑100                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGC    <  1:2235851/100‑1                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGC    >  2:2986819/1‑100                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGC    <  1:960401/100‑1                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGC    >  1:670556/1‑100                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGC    >  1:952119/1‑100                                                                                                       GCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGG     <  1:628444/99‑1                                                                                                        CCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTCTCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCA   <  2:2977251/100‑1                                                                                                        CCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCA   <  1:289887/100‑1                                                                                                        CCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCA   >  2:2871689/1‑100                                                                                                        CCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCA   >  2:2539640/1‑100                                                                                                        CCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCA   <  1:3737161/100‑1                                                                                                         CCGACCCGGAGCTGTACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  1:2575011/1‑100                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  <  1:3365341/100‑1                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  1:2717208/1‑100                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  1:2612947/1‑100                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  2:3349415/1‑100                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  1:253405/1‑100                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  1:3864645/1‑100                                                                                                         CCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  <  1:929201/100‑1                                                                                                                                                                                                              TCATACCGGTAAAGATAGTGCGCGTCACGGGCGATACGGTTATCCGGCCACATGCTGAGGGTGCTGTCCGGGTGCAGCTCCGGGTCGGGCAGGCGGTTACCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/734272‑734168 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgccCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAG  >  NC_000913/734186‑734284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.