New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3214896 =NA (NA)7 (0.050) 5/168 NT NA noncoding (5/33 nt) REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3214925 = NA (NA)intergenic (+37/+42) rpoD/mug RNA polymerase, sigma 70 (sigma D) factor/G/U mismatch‑specific DNA glycosylase; xanthine DNA glycosylase

Only 100 of 216 total aligned reads displayed.

GCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGT  >  NC_000913/3214797‑3214995
                                                                                                   |                                                                                                   
 cgAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGc                                                                                                    <  1:372396/100‑1 (MQ=255)
 aactggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGc                                                                                                    <  2:322738‑M1/2‑1 (MQ=255)
  gAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGcc                                                                                                   <  2:4159573/100‑1 (MQ=255)
   ctggttgcagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaacaggtggcgtttgtgcagagggcctagtGCCg                                                                                                  <  1:2187839‑M1/4‑1 (MQ=255)
    tggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCgg                                                                                                 >  1:301180‑M1/96‑100 (MQ=255)
    tggttgaagcgtatcgcgagctggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCgg                                                                                                 >  1:2647420‑M1/96‑100 (MQ=255)
       tATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATc                                                                                              >  1:1054370/1‑100 (MQ=255)
       tATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATc                                                                                              >  1:1453909/1‑100 (MQ=255)
         tCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAg                                                                                            >  2:1783607/1‑100 (MQ=255)
         tCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAg                                                                                            <  2:3211713/100‑1 (MQ=255)
           cGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGc                                                                                          >  2:3715199/1‑100 (MQ=255)
           cGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCGTCCTGGACGATTAATCGGTAGGCCGGATCAGGc                                                                                          <  2:3457245/100‑1 (MQ=255)
            gTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCg                                                                                         <  2:1447010/100‑1 (MQ=255)
            gTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCg                                                                                         <  1:422210/100‑1 (MQ=255)
              cAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGtt                                                                                       <  1:1926389/100‑1 (MQ=255)
                gATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAc                                                                                     >  1:405692/1‑100 (MQ=255)
                gATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAc                                                                                     >  1:645682/1‑100 (MQ=255)
                gATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAc                                                                                     >  2:3155607/1‑100 (MQ=255)
                gATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGCAGCGTCTTGGACGAGTAATCGCTATGCCGGAGCAGGCGGTa                                                                                      >  2:2158687/1‑99 (MQ=255)
                 aTCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTCGCGTCCTGGACGATTAATCGGTAGGCCGGGTCAGGCGTTAcg                                                                                    >  1:4075676/1‑100 (MQ=255)
                 aTCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcg                                                                                    >  2:693996/1‑100 (MQ=255)
                  tCGAAGCGAAGGCGCTGCGCAAACTGCGTCGCCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgc                                                                                   <  2:3490172/100‑1 (MQ=255)
                   cgaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgcc                                                                                  >  2:3565822/1‑100 (MQ=255)
                    gaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgccg                                                                                 >  1:2232273/1‑100 (MQ=255)
                    gaagcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAcgccg                                                                                 <  1:257061/100‑1 (MQ=255)
                       gcgaagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAc                                                                              >  1:2854892/1‑100 (MQ=255)
                          aagGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCg                                                                           <  2:2900071/100‑1 (MQ=255)
                           ggaccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagGCCGGATCAGGCGTTACGCCGCACCCgg                                                                          >  1:728117‑M1/73‑100 (MQ=255)
                             ccaggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagtgcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCa                                                                        >  2:2225335‑M1/71‑100 (MQ=255)
                               aggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCACt                                                                      >  1:290032‑M1/69‑100 (MQ=255)
                                   cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                  <  2:1533334/100‑1 (MQ=255)
                                   cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                  <  2:1819209/100‑1 (MQ=255)
                                    gcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGcc                                                                 <  1:694000/100‑1 (MQ=255)
                                     cAAACTGCGTCACCCGAGCCGTTCTGAAGTGTTGCGTAGCTTCCTGGAAGATTAATAGGTAGGCCGGATCAGGAGTTACGCAGCACCCGGCACTAgg                                                                   >  2:2632732/1‑97 (MQ=255)
                                       aaCTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCctc                                                              <  2:3844682/100‑1 (MQ=255)
                                         cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                            <  2:3050952/100‑1 (MQ=255)
                                          tGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCTCACCCGGCACTAGGCCCTCTGc                                                           <  2:2416855/100‑1 (MQ=255)
                                           gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGGCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGca                                                          <  1:1492598/100‑1 (MQ=255)
                                           gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcn                                                          <  2:1456694/100‑2 (MQ=255)
                                            cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                         >  2:1263989/1‑100 (MQ=255)
                                            cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                         <  1:995846/100‑1 (MQ=255)
                                             gTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcaca                                                        <  1:3171914/100‑1 (MQ=255)
                                             gTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcaca                                                        <  1:563657/100‑1 (MQ=255)
                                               cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaaa                                                      <  1:3895603/100‑1 (MQ=255)
                                               cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaaa                                                      >  2:329637/1‑100 (MQ=255)
                                               cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaaa                                                      >  2:2968068/1‑100 (MQ=255)
                                                 cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                    >  1:174539/1‑100 (MQ=255)
                                                 cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                    <  1:3698976/100‑1 (MQ=255)
                                                   cGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGcc                                                  <  2:1233488/100‑1 (MQ=255)
                                                    gAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCa                                                 <  2:405689/100‑1 (MQ=255)
                                                      gCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAcc                                               <  1:1670593/100‑1 (MQ=255)
                                                       ccGTTCTGAAGTGCTGCGTAGCTTCCTGGCCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAGCCGGCACTAGCCCCTCTGCACAAACGCCACCt                                              >  2:2281319/1‑100 (MQ=255)
                                                         gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                            >  1:2093222/1‑100 (MQ=255)
                                                         gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                            >  1:184641/1‑100 (MQ=255)
                                                         gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCtt                                             >  2:2794698/1‑99 (MQ=255)
                                                           tCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTc                                          <  1:2924811/100‑1 (MQ=255)
                                                            cTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCg                                         >  1:527089/1‑100 (MQ=255)
                                                            cTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCg                                         <  1:3380465/100‑1 (MQ=255)
                                                              gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                       >  1:1362942/1‑100 (MQ=255)
                                                              gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                       <  2:160661/100‑1 (MQ=255)
                                                               aaGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTg                                      <  1:1646254/100‑1 (MQ=255)
                                                                aggcgctggTAGCTTCCTGGACGATTATTCGTTAGGCGGCATCAGCCTTTACGCCGCACCCGGCCTTAGCCCCTCTGCACAAACGCCACCTTTTCGGt                                       <  2:3189657/90‑1 (MQ=255)
                                                                 gTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGc                                    <  1:1245734/100‑1 (MQ=255)
                                                                  tgctccGTGGCTTGCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCAGCACGCGGCACTAGGGCCTCTGCACAAACGCCACCTTTTCGGt                                       >  2:865622/1‑96 (MQ=255)
                                                                    ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                 >  1:465394/1‑100 (MQ=255)
                                                                     tgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTATGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGttt                                >  1:326191/1‑100 (MQ=255)
                                                                     tgcGTAGCTTCCTAGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCCCACCCGGCACTAAGCCAACTGCACAAACGCCACATTTTCggcagcg                                   >  2:2583542/1‑92 (MQ=255)
                                                                      gcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttt                               <  2:3804346/100‑1 (MQ=255)
                                                                      gcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttt                               >  2:957359/1‑100 (MQ=255)
                                                                      gcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttt                               <  1:3907590/100‑1 (MQ=255)
                                                                       cGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGttttt                              <  2:3776992/100‑1 (MQ=255)
                                                                         tAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTa                            <  2:2178784/100‑1 (MQ=255)
                                                                          aGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTAt                           <  2:1630497/100‑1 (MQ=255)
                                                                          aGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTAt                           <  1:2955992/100‑1 (MQ=255)
                                                                           gCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATc                          >  1:26952/1‑100 (MQ=255)
                                                                            cTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCg                         <  2:3890247/100‑1 (MQ=255)
                                                                            cTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCg                         <  2:2683951/100‑1 (MQ=255)
                                                                            cTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCg                         <  2:3964955/100‑1 (MQ=255)
                                                                              tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGcc                       <  1:202747/100‑1 (MQ=255)
                                                                                cTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCa                     <  1:3310987/100‑1 (MQ=255)
                                                                                cTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCa                     <  1:2395436/100‑1 (MQ=255)
                                                                                cTGGACGATTAATCGGTAGGCCGCATCAGGCGTTCCGCCGCACCCGGCCCTAGGCCCTCTGCACACACGCCACCTTTTCGCTGGCGTCTTTTATCGCCCa                     >  2:1152334/1‑100 (MQ=255)
                                                                                   gACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGc                  <  2:3872616/100‑1 (MQ=255)
                                                                                   gACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGCTTTTTATCCCACACGc                  >  2:562200/1‑100 (MQ=255)
                                                                                    aCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa                 >  1:3551457/1‑100 (MQ=255)
                                                                                         tAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAcc            <  1:3227533/100‑1 (MQ=255)
                                                                                         tAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAcc            <  1:2462499/100‑1 (MQ=255)
                                                                                          aaTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAcc            >  2:3062068/1‑99 (MQ=255)
                                                                                          aaTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCa           >  2:2344400/1‑100 (MQ=255)
                                                                                          aaTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCa           >  1:162655/1‑100 (MQ=255)
                                                                                           aTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAg          <  1:3132487/100‑1 (MQ=255)
                                                                                           aTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAg          >  1:1540368/1‑100 (MQ=255)
                                                                                              ggTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgcgc       >  1:1236173/1‑100 (MQ=255)
                                                                                                tAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCt     <  1:2121250/100‑1 (MQ=255)
                                                                                                 aGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTg    <  1:3407923/100‑1 (MQ=255)
                                                                                                 aGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTg    <  1:118372/100‑1 (MQ=255)
                                                                                                  ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg   <  2:3313851/100‑1 (MQ=255)
                                                                                                  ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg   <  2:1577/100‑1 (MQ=255)
                                                                                                  ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg   >  2:1712151/1‑100 (MQ=255)
                                                                                                   GCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt  >  2:1925329‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGT  >  NC_000913/3214797‑3214995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.